Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HLA-DOBP13765 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
HLA-DOBP13765 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.31□□□□□ -1.88
HLA-DOBP13765 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HLA-DOBP13765 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.31□□□□□ -1.88
HLA-DOBP13765 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.31□□□□□ -1.88
HLA-DOBP13765 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
HLA-DOBP13765 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
HLA-DOBP13765 RNU6-1155P-201ENST00000363554 107 ntBASIC3.31□□□□□ -1.88
HLA-DOBP13765 RN7SKP280-201ENST00000364196 304 ntBASIC3.31□□□□□ -1.88
HLA-DOBP13765 RNU6-637P-201ENST00000384050 107 ntBASIC3.31□□□□□ -1.88
HLA-DOBP13765 RNU6-278P-201ENST00000390945 109 ntBASIC3.31□□□□□ -1.88
HLA-DOBP13765 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.31□□□□□ -1.88
HLA-DOBP13765 RPL32P23-201ENST00000397237 405 ntBASIC3.31□□□□□ -1.88
HLA-DOBP13765 BTF3P7-201ENST00000407097 488 ntBASIC3.31□□□□□ -1.88
HLA-DOBP13765 RN7SKP156-201ENST00000410308 342 ntBASIC3.31□□□□□ -1.88
HLA-DOBP13765 RNU6-516P-201ENST00000411381 104 ntBASIC3.31□□□□□ -1.88
HLA-DOBP13765 AMD1P2-201ENST00000412936 992 ntBASIC3.31□□□□□ -1.88
HLA-DOBP13765 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3.31□□□□□ -1.88
HLA-DOBP13765 RPS7P15-201ENST00000415804 584 ntBASIC3.31□□□□□ -1.88
HLA-DOBP13765 MTND1P23-201ENST00000416931 372 ntBASIC3.31□□□□□ -1.88
HLA-DOBP13765 AC099677.1-201ENST00000420575 175 ntBASIC3.31□□□□□ -1.88
HLA-DOBP13765 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC3.31□□□□□ -1.88
HLA-DOBP13765 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC3.31□□□□□ -1.88
HLA-DOBP13765 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.31□□□□□ -1.88
HLA-DOBP13765 OR4K11P-201ENST00000431829 904 ntBASIC3.31□□□□□ -1.88
HLA-DOBP13765 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.31□□□□□ -1.88
HLA-DOBP13765 MTATP6P30-201ENST00000443540 664 ntBASIC3.31□□□□□ -1.88
HLA-DOBP13765 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.31□□□□□ -1.88
HLA-DOBP13765 AC013267.1-201ENST00000458227 267 ntBASIC3.31□□□□□ -1.88
HLA-DOBP13765 AC068587.1-201ENST00000483613 781 ntBASIC3.31□□□□□ -1.88
HLA-DOBP13765 RPS3AP14-201ENST00000483907 780 ntBASIC3.31□□□□□ -1.88
HLA-DOBP13765 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
HLA-DOBP13765 AC093278.1-201ENST00000494700 600 ntBASIC3.31□□□□□ -1.88
HLA-DOBP13765 AC019235.1-201ENST00000503847 207 ntBASIC3.31□□□□□ -1.88
HLA-DOBP13765 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.31□□□□□ -1.88
HLA-DOBP13765 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.31□□□□□ -1.88
HLA-DOBP13765 AC021146.1-201ENST00000511202 716 ntBASIC3.31□□□□□ -1.88
HLA-DOBP13765 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.31□□□□□ -1.88
HLA-DOBP13765 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.31□□□□□ -1.88
HLA-DOBP13765 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.31□□□□□ -1.88
HLA-DOBP13765 AC007991.1-201ENST00000522680 631 ntBASIC3.31□□□□□ -1.88
HLA-DOBP13765 AC022616.3-201ENST00000523940 148 ntBASIC3.31□□□□□ -1.88
HLA-DOBP13765 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC3.31□□□□□ -1.88
HLA-DOBP13765 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.31□□□□□ -1.88
HLA-DOBP13765 AP003034.1-201ENST00000534621 422 ntBASIC3.31□□□□□ -1.88
HLA-DOBP13765 AL133271.1-201ENST00000538229 291 ntBASIC3.31□□□□□ -1.88
HLA-DOBP13765 AC018630.1-201ENST00000541376 925 ntBASIC3.31□□□□□ -1.88
HLA-DOBP13765 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.31□□□□□ -1.88
HLA-DOBP13765 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC3.31□□□□□ -1.88
HLA-DOBP13765 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC3.31□□□□□ -1.88
HLA-DOBP13765 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
HLA-DOBP13765 AC244505.7-201ENST00000599675 272 ntBASIC3.31□□□□□ -1.88
HLA-DOBP13765 AC012669.1-201ENST00000603209 283 ntBASIC3.31□□□□□ -1.88
HLA-DOBP13765 AC010680.3-201ENST00000604215 520 ntBASIC3.31□□□□□ -1.88
HLA-DOBP13765 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.31□□□□□ -1.88
HLA-DOBP13765 RNU1-30P-201ENST00000606575 163 ntBASIC3.31□□□□□ -1.88
HLA-DOBP13765 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.31□□□□□ -1.88
HLA-DOBP13765 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.31□□□□□ -1.88
HLA-DOBP13765 AC092954.2-201ENST00000609103 430 ntBASIC3.31□□□□□ -1.88
HLA-DOBP13765 MIR6130-201ENST00000619419 109 ntBASIC3.31□□□□□ -1.88
HLA-DOBP13765 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
HLA-DOBP13765 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
HLA-DOBP13765 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HLA-DOBP13765 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HLA-DOBP13765 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HLA-DOBP13765 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.3□□□□□ -1.88
HLA-DOBP13765 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.3□□□□□ -1.88
HLA-DOBP13765 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.3□□□□□ -1.88
HLA-DOBP13765 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.3□□□□□ -1.88
HLA-DOBP13765 OR5J1P-201ENST00000313544 939 ntBASIC3.3□□□□□ -1.88
HLA-DOBP13765 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HLA-DOBP13765 Y_RNA.248-201ENST00000364501 109 ntBASIC3.3□□□□□ -1.88
HLA-DOBP13765 RNU4-12P-201ENST00000365233 139 ntBASIC3.3□□□□□ -1.88
HLA-DOBP13765 RNU6-282P-201ENST00000365357 103 ntBASIC3.3□□□□□ -1.88
HLA-DOBP13765 U3.15-201ENST00000365398 212 ntBASIC3.3□□□□□ -1.88
HLA-DOBP13765 RNY3P13-201ENST00000365542 102 ntBASIC3.3□□□□□ -1.88
HLA-DOBP13765 Y_RNA.372-201ENST00000365599 102 ntBASIC3.3□□□□□ -1.88
HLA-DOBP13765 RNU6-432P-201ENST00000384196 109 ntBASIC3.3□□□□□ -1.88
HLA-DOBP13765 RNU6-754P-201ENST00000391166 107 ntBASIC3.3□□□□□ -1.88
HLA-DOBP13765 CALM2P3-201ENST00000400429 449 ntBASIC3.3□□□□□ -1.88
HLA-DOBP13765 AL590002.1-201ENST00000406554 418 ntBASIC3.3□□□□□ -1.88
HLA-DOBP13765 MIR1193-201ENST00000408109 78 ntBASIC3.3□□□□□ -1.88
HLA-DOBP13765 HMGB3P20-201ENST00000417997 600 ntBASIC3.3□□□□□ -1.88
HLA-DOBP13765 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC3.3□□□□□ -1.88
HLA-DOBP13765 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.3□□□□□ -1.88
HLA-DOBP13765 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3.3□□□□□ -1.88
HLA-DOBP13765 AL121871.1-201ENST00000443413 436 ntBASIC3.3□□□□□ -1.88
HLA-DOBP13765 Z99127.3-201ENST00000448158 395 ntBASIC3.3□□□□□ -1.88
HLA-DOBP13765 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.3□□□□□ -1.88
HLA-DOBP13765 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.3□□□□□ -1.88
HLA-DOBP13765 AL133162.1-201ENST00000463228 453 ntBASIC3.3□□□□□ -1.88
HLA-DOBP13765 RN7SL132P-201ENST00000478131 296 ntBASIC3.3□□□□□ -1.88
HLA-DOBP13765 AC020893.1-201ENST00000502452 580 ntBASIC3.3□□□□□ -1.88
HLA-DOBP13765 RNU6-718P-201ENST00000516166 105 ntBASIC3.3□□□□□ -1.88
HLA-DOBP13765 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.3□□□□□ -1.88
HLA-DOBP13765 AC011979.2-201ENST00000527568 352 ntBASIC3.3□□□□□ -1.88
HLA-DOBP13765 MTCYBP41-201ENST00000528913 1123 ntBASIC3.3□□□□□ -1.88
HLA-DOBP13765 AL133153.1-201ENST00000557756 303 ntBASIC3.3□□□□□ -1.88
HLA-DOBP13765 SNORA59B-202ENST00000578183 701 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms