Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 AP1B1P2-201ENST00000416196 106 ntBASIC2.05□□□□□ -2.08
COL11A1P12107 AC023128.2-201ENST00000420880 1223 ntBASIC2.05□□□□□ -2.08
COL11A1P12107 AL358453.1-201ENST00000422522 250 ntBASIC2.05□□□□□ -2.08
COL11A1P12107 CKS1BP5-201ENST00000434172 273 ntBASIC2.05□□□□□ -2.08
COL11A1P12107 RPS7P2-201ENST00000435134 607 ntBASIC2.05□□□□□ -2.08
COL11A1P12107 AL590762.3-201ENST00000436372 640 ntBASIC2.05□□□□□ -2.08
COL11A1P12107 HMGN2P20-201ENST00000437531 273 ntBASIC2.05□□□□□ -2.08
COL11A1P12107 HMGB1P12-201ENST00000438594 598 ntBASIC2.05□□□□□ -2.08
COL11A1P12107 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.05□□□□□ -2.08
COL11A1P12107 XKRYP5-201ENST00000449659 483 ntBASIC2.05□□□□□ -2.08
COL11A1P12107 OR51B8P-201ENST00000449892 769 ntBASIC2.05□□□□□ -2.08
COL11A1P12107 AC011753.1-201ENST00000451001 220 ntBASIC2.05□□□□□ -2.08
COL11A1P12107 MTND2P30-201ENST00000456663 382 ntBASIC2.05□□□□□ -2.08
COL11A1P12107 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC2.05□□□□□ -2.08
COL11A1P12107 AC239860.2-201ENST00000525886 270 ntBASIC2.05□□□□□ -2.08
COL11A1P12107 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.05□□□□□ -2.08
COL11A1P12107 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC2.05□□□□□ -2.08
COL11A1P12107 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC2.05□□□□□ -2.08
COL11A1P12107 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.05□□□□□ -2.08
COL11A1P12107 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
COL11A1P12107 AP000943.4-201ENST00000622912 357 ntBASIC2.05□□□□□ -2.08
COL11A1P12107 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC2.05□□□□□ -2.08
COL11A1P12107 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC2.05□□□□□ -2.08
COL11A1P12107 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
COL11A1P12107 AL049737.1-201ENST00000413920 1403 ntBASIC2.04□□□□□ -2.08
COL11A1P12107 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
COL11A1P12107 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC2.04□□□□□ -2.08
COL11A1P12107 MTND4P23-201ENST00000447723 1363 ntBASIC2.04□□□□□ -2.08
COL11A1P12107 Y_RNA.110-201ENST00000363220 99 ntBASIC2.04□□□□□ -2.08
COL11A1P12107 RNA5SP391-201ENST00000363456 119 ntBASIC2.04□□□□□ -2.08
COL11A1P12107 PTGES3P2-201ENST00000407942 482 ntBASIC2.04□□□□□ -2.08
COL11A1P12107 RPL19P1-201ENST00000411635 428 ntBASIC2.04□□□□□ -2.08
COL11A1P12107 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC2.04□□□□□ -2.08
COL11A1P12107 AL353729.1-201ENST00000425044 720 ntBASIC2.04□□□□□ -2.08
COL11A1P12107 NDUFA5P4-201ENST00000436704 385 ntBASIC2.04□□□□□ -2.08
COL11A1P12107 RPL23AP58-201ENST00000440453 469 ntBASIC2.04□□□□□ -2.08
COL11A1P12107 RPS26P30-201ENST00000443431 335 ntBASIC2.04□□□□□ -2.08
COL11A1P12107 AL021397.1-201ENST00000451806 248 ntBASIC2.04□□□□□ -2.08
COL11A1P12107 RPL21P104-201ENST00000464143 478 ntBASIC2.04□□□□□ -2.08
COL11A1P12107 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC2.04□□□□□ -2.08
COL11A1P12107 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.04□□□□□ -2.08
COL11A1P12107 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.04□□□□□ -2.08
COL11A1P12107 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC2.04□□□□□ -2.08
COL11A1P12107 AP003717.3-201ENST00000544832 1180 ntBASIC2.04□□□□□ -2.08
COL11A1P12107 SYF2P1-201ENST00000550658 413 ntBASIC2.04□□□□□ -2.08
COL11A1P12107 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC2.04□□□□□ -2.08
COL11A1P12107 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC2.04□□□□□ -2.08
COL11A1P12107 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.04□□□□□ -2.08
COL11A1P12107 MIR4474-201ENST00000579189 78 ntBASIC2.04□□□□□ -2.08
COL11A1P12107 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.04□□□□□ -2.08
COL11A1P12107 AL450270.1-201ENST00000606160 391 ntBASIC2.04□□□□□ -2.08
COL11A1P12107 AC010678.1-201ENST00000614118 713 ntBASIC2.04□□□□□ -2.08
COL11A1P12107 AL109620.1-201ENST00000618738 1197 ntBASIC2.04□□□□□ -2.08
COL11A1P12107 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC2.04□□□□□ -2.08
COL11A1P12107 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC2.04□□□□□ -2.08
COL11A1P12107 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
COL11A1P12107 PABPC1P7-201ENST00000413177 1513 ntBASIC2.04□□□□□ -2.08
COL11A1P12107 AC004520.1-201ENST00000608362 1413 ntBASIC2.04□□□□□ -2.08
COL11A1P12107 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
COL11A1P12107 RNU6-98P-201ENST00000384173 107 ntBASIC2.03□□□□□ -2.08
COL11A1P12107 RNU1-101P-201ENST00000391171 127 ntBASIC2.03□□□□□ -2.08
COL11A1P12107 AL021407.1-201ENST00000404531 386 ntBASIC2.03□□□□□ -2.08
COL11A1P12107 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.03□□□□□ -2.08
COL11A1P12107 MTCO3P4-201ENST00000419236 787 ntBASIC2.03□□□□□ -2.08
COL11A1P12107 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.03□□□□□ -2.08
COL11A1P12107 Z82209.1-201ENST00000422141 2135 ntBASIC2.03□□□□□ -2.08
COL11A1P12107 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
COL11A1P12107 RPL17P35-201ENST00000432217 549 ntBASIC2.03□□□□□ -2.08
COL11A1P12107 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.03□□□□□ -2.08
COL11A1P12107 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC2.03□□□□□ -2.08
COL11A1P12107 AP002345.1-201ENST00000456493 928 ntBASIC2.03□□□□□ -2.08
COL11A1P12107 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.03□□□□□ -2.08
COL11A1P12107 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC2.03□□□□□ -2.08
COL11A1P12107 AC108078.2-201ENST00000510750 236 ntBASIC2.03□□□□□ -2.08
COL11A1P12107 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC2.03□□□□□ -2.08
COL11A1P12107 RNA5SP182-201ENST00000516064 82 ntBASIC2.03□□□□□ -2.08
COL11A1P12107 AC092451.2-201ENST00000538746 658 ntBASIC2.03□□□□□ -2.08
COL11A1P12107 CBX3P4-201ENST00000538909 354 ntBASIC2.03□□□□□ -2.08
COL11A1P12107 AC126177.3-201ENST00000551839 688 ntBASIC2.03□□□□□ -2.08
COL11A1P12107 AC090616.5-202ENST00000582111 297 ntBASIC2.03□□□□□ -2.08
COL11A1P12107 ZNF92P2-201ENST00000600543 1059 ntBASIC2.03□□□□□ -2.08
COL11A1P12107 AL590099.1-201ENST00000615276 138 ntBASIC2.03□□□□□ -2.08
COL11A1P12107 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC2.03□□□□□ -2.08
COL11A1P12107 AC012150.2-201ENST00000621300 544 ntBASIC2.03□□□□□ -2.08
COL11A1P12107 OR1S1-201ENST00000624470 978 ntBASIC2.03□□□□□ -2.08
COL11A1P12107 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.03□□□□□ -2.09
COL11A1P12107 SNORA51.2-201ENST00000364595 132 ntBASIC2.03□□□□□ -2.09
COL11A1P12107 TAF9BP2-201ENST00000400856 499 ntBASIC2.03□□□□□ -2.09
COL11A1P12107 AGR3-202ENST00000402239 563 ntTSL 2 BASIC2.03□□□□□ -2.09
COL11A1P12107 AC019129.1-201ENST00000403786 261 ntBASIC2.03□□□□□ -2.09
COL11A1P12107 WARS2P1-201ENST00000429678 537 ntBASIC2.03□□□□□ -2.09
COL11A1P12107 TAF9P1-201ENST00000445421 515 ntBASIC2.03□□□□□ -2.09
COL11A1P12107 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC2.03□□□□□ -2.09
COL11A1P12107 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.03□□□□□ -2.09
COL11A1P12107 TAF9P2-201ENST00000454958 515 ntBASIC2.03□□□□□ -2.09
COL11A1P12107 AC090453.1-201ENST00000495560 436 ntBASIC2.03□□□□□ -2.09
COL11A1P12107 SUMO1P1-201ENST00000497904 306 ntBASIC2.03□□□□□ -2.09
COL11A1P12107 AC011352.3-201ENST00000505162 593 ntBASIC2.03□□□□□ -2.09
COL11A1P12107 MTCYBP37-201ENST00000510642 1133 ntBASIC2.03□□□□□ -2.09
COL11A1P12107 snoZ278.1-201ENST00000517059 112 ntBASIC2.03□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms