Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 RNU1-109P-201ENST00000383960 147 ntBASIC1.7□□□□□ -2.14
FREM3P0C091 AC027124.2-201ENST00000428249 105 ntBASIC1.7□□□□□ -2.14
FREM3P0C091 AL592045.1-201ENST00000429867 352 ntBASIC1.7□□□□□ -2.14
FREM3P0C091 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC1.7□□□□□ -2.14
FREM3P0C091 RPL38P4-201ENST00000502376 214 ntBASIC1.7□□□□□ -2.14
FREM3P0C091 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC1.7□□□□□ -2.14
FREM3P0C091 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC1.7□□□□□ -2.14
FREM3P0C091 VTRNA2-2P-201ENST00000516091 103 ntBASIC1.7□□□□□ -2.14
FREM3P0C091 ZKSCAN7P1-201ENST00000543668 673 ntBASIC1.7□□□□□ -2.14
FREM3P0C091 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.7□□□□□ -2.14
FREM3P0C091 AC079610.2-201ENST00000604818 690 ntBASIC1.7□□□□□ -2.14
FREM3P0C091 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC1.7□□□□□ -2.14
FREM3P0C091 AC119674.1-220ENST00000641502 1048 ntBASIC1.7□□□□□ -2.14
FREM3P0C091 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC1.7□□□□□ -2.14
FREM3P0C091 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
FREM3P0C091 AC135776.4-201ENST00000624300 1904 ntBASIC1.7□□□□□ -2.14
FREM3P0C091 PABPC1P9-201ENST00000426076 1612 ntBASIC1.7□□□□□ -2.14
FREM3P0C091 Z82209.1-201ENST00000422141 2135 ntBASIC1.7□□□□□ -2.14
FREM3P0C091 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.7□□□□□ -2.14
FREM3P0C091 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
FREM3P0C091 RNU6-1249P-201ENST00000363237 111 ntBASIC1.7□□□□□ -2.14
FREM3P0C091 Y_RNA.226-201ENST00000364337 114 ntBASIC1.7□□□□□ -2.14
FREM3P0C091 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
FREM3P0C091 RNU6-712P-201ENST00000410558 100 ntBASIC1.7□□□□□ -2.14
FREM3P0C091 RNU2-25P-201ENST00000411041 191 ntBASIC1.7□□□□□ -2.14
FREM3P0C091 Z96811.1-201ENST00000445880 108 ntBASIC1.7□□□□□ -2.14
FREM3P0C091 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC1.7□□□□□ -2.14
FREM3P0C091 RNA5SP310-201ENST00000459084 116 ntBASIC1.7□□□□□ -2.14
FREM3P0C091 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC1.7□□□□□ -2.14
FREM3P0C091 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC1.7□□□□□ -2.14
FREM3P0C091 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC1.7□□□□□ -2.14
FREM3P0C091 ACTR3BP3-201ENST00000565577 979 ntBASIC1.7□□□□□ -2.14
FREM3P0C091 AP001004.1-201ENST00000582468 324 ntBASIC1.7□□□□□ -2.14
FREM3P0C091 AC013468.1-201ENST00000608680 598 ntBASIC1.7□□□□□ -2.14
FREM3P0C091 AC093673.2-201ENST00000609674 331 ntBASIC1.7□□□□□ -2.14
FREM3P0C091 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.7□□□□□ -2.14
FREM3P0C091 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.7□□□□□ -2.14
FREM3P0C091 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
FREM3P0C091 RNU6-1180P-201ENST00000364935 107 ntBASIC1.69□□□□□ -2.14
FREM3P0C091 RNU6-891P-201ENST00000384280 111 ntBASIC1.69□□□□□ -2.14
FREM3P0C091 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
FREM3P0C091 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.69□□□□□ -2.14
FREM3P0C091 AC073264.1-201ENST00000411508 416 ntBASIC1.69□□□□□ -2.14
FREM3P0C091 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC1.69□□□□□ -2.14
FREM3P0C091 AC096632.1-201ENST00000427395 310 ntBASIC1.69□□□□□ -2.14
FREM3P0C091 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.69□□□□□ -2.14
FREM3P0C091 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC1.69□□□□□ -2.14
FREM3P0C091 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC1.69□□□□□ -2.14
FREM3P0C091 AL031659.1-201ENST00000447075 539 ntBASIC1.69□□□□□ -2.14
FREM3P0C091 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.69□□□□□ -2.14
FREM3P0C091 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC1.69□□□□□ -2.14
FREM3P0C091 AC011753.1-201ENST00000451001 220 ntBASIC1.69□□□□□ -2.14
FREM3P0C091 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC1.69□□□□□ -2.14
FREM3P0C091 AP002345.1-201ENST00000456493 928 ntBASIC1.69□□□□□ -2.14
FREM3P0C091 RBM43P1-201ENST00000476891 1081 ntBASIC1.69□□□□□ -2.14
FREM3P0C091 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
FREM3P0C091 AC104057.1-201ENST00000515547 497 ntBASIC1.69□□□□□ -2.14
FREM3P0C091 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.69□□□□□ -2.14
FREM3P0C091 HMGB1P1-201ENST00000522557 636 ntBASIC1.69□□□□□ -2.14
FREM3P0C091 AC087272.1-201ENST00000523624 533 ntBASIC1.69□□□□□ -2.14
FREM3P0C091 C1DP5-201ENST00000525775 383 ntBASIC1.69□□□□□ -2.14
FREM3P0C091 MGST1-215ENST00000540056 546 ntTSL 3 BASIC1.69□□□□□ -2.14
FREM3P0C091 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC1.69□□□□□ -2.14
FREM3P0C091 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.69□□□□□ -2.14
FREM3P0C091 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC1.69□□□□□ -2.14
FREM3P0C091 RPAP2P1-201ENST00000603626 1168 ntBASIC1.69□□□□□ -2.14
FREM3P0C091 AC242628.1-201ENST00000606810 391 ntBASIC1.69□□□□□ -2.14
FREM3P0C091 Y_RNA.783-201ENST00000613546 102 ntBASIC1.69□□□□□ -2.14
FREM3P0C091 AL360181.4-201ENST00000621752 134 ntBASIC1.69□□□□□ -2.14
FREM3P0C091 RNU6-1197P-201ENST00000391183 107 ntBASIC1.69□□□□□ -2.14
FREM3P0C091 RNU6-193P-201ENST00000410977 107 ntBASIC1.69□□□□□ -2.14
FREM3P0C091 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
FREM3P0C091 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC1.69□□□□□ -2.14
FREM3P0C091 RPL7P30-201ENST00000420888 709 ntBASIC1.69□□□□□ -2.14
FREM3P0C091 OFD1P18Y-201ENST00000420889 959 ntBASIC1.69□□□□□ -2.14
FREM3P0C091 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC1.69□□□□□ -2.14
FREM3P0C091 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC1.69□□□□□ -2.14
FREM3P0C091 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.69□□□□□ -2.14
FREM3P0C091 HSPE1P18-201ENST00000517602 280 ntBASIC1.69□□□□□ -2.14
FREM3P0C091 IGKV2D-36-201ENST00000518643 226 ntBASIC1.69□□□□□ -2.14
FREM3P0C091 ERHP1-201ENST00000523006 310 ntBASIC1.69□□□□□ -2.14
FREM3P0C091 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.69□□□□□ -2.14
FREM3P0C091 AC110588.1-201ENST00000559699 137 ntBASIC1.69□□□□□ -2.14
FREM3P0C091 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.69□□□□□ -2.14
FREM3P0C091 AL355812.1-201ENST00000603215 216 ntBASIC1.69□□□□□ -2.14
FREM3P0C091 AC025588.3-201ENST00000604182 274 ntBASIC1.69□□□□□ -2.14
FREM3P0C091 AP001330.4-201ENST00000604350 154 ntBASIC1.69□□□□□ -2.14
FREM3P0C091 AC010738.1-201ENST00000604970 987 ntBASIC1.69□□□□□ -2.14
FREM3P0C091 AC006249.1-201ENST00000621223 471 ntBASIC1.69□□□□□ -2.14
FREM3P0C091 PISRT1-201ENST00000626175 531 ntBASIC1.69□□□□□ -2.14
FREM3P0C091 MTND4P23-201ENST00000447723 1363 ntBASIC1.69□□□□□ -2.14
FREM3P0C091 AP006437.1-201ENST00000641440 3685 ntBASIC1.68□□□□□ -2.14
FREM3P0C091 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
FREM3P0C091 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
FREM3P0C091 RNU4-52P-201ENST00000384209 138 ntBASIC1.68□□□□□ -2.14
FREM3P0C091 MIR144-201ENST00000384886 86 ntBASIC1.68□□□□□ -2.14
FREM3P0C091 SNORA26.9-201ENST00000391322 122 ntBASIC1.68□□□□□ -2.14
FREM3P0C091 RPL17P12-201ENST00000413391 526 ntBASIC1.68□□□□□ -2.14
FREM3P0C091 ACTR3BP6-201ENST00000422332 1241 ntBASIC1.68□□□□□ -2.14
FREM3P0C091 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms