Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.83□□□□□ -1.8
HOXC6P09630 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
HOXC6P09630 AL022578.1-201ENST00000439330 1433 ntBASIC3.83□□□□□ -1.8
HOXC6P09630 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
HOXC6P09630 AC095050.2-201ENST00000510748 1458 ntBASIC3.83□□□□□ -1.8
HOXC6P09630 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.83□□□□□ -1.8
HOXC6P09630 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
HOXC6P09630 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
HOXC6P09630 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.83□□□□□ -1.8
HOXC6P09630 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
HOXC6P09630 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
HOXC6P09630 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
HOXC6P09630 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
HOXC6P09630 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.82□□□□□ -1.8
HOXC6P09630 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.82□□□□□ -1.8
HOXC6P09630 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.82□□□□□ -1.8
HOXC6P09630 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.82□□□□□ -1.8
HOXC6P09630 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
HOXC6P09630 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
HOXC6P09630 ELF2P3-201ENST00000445099 1506 ntBASIC3.82□□□□□ -1.8
HOXC6P09630 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
HOXC6P09630 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HOXC6P09630 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
HOXC6P09630 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
HOXC6P09630 SNORA80A-201ENST00000363922 136 ntBASIC3.82□□□□□ -1.8
HOXC6P09630 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC3.82□□□□□ -1.8
HOXC6P09630 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
HOXC6P09630 RPS3AP3-201ENST00000411933 242 ntBASIC3.82□□□□□ -1.8
HOXC6P09630 BX295541.1-201ENST00000417774 250 ntBASIC3.82□□□□□ -1.8
HOXC6P09630 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.82□□□□□ -1.8
HOXC6P09630 AL353678.1-201ENST00000422735 741 ntBASIC3.82□□□□□ -1.8
HOXC6P09630 RPL30P3-201ENST00000424262 333 ntBASIC3.82□□□□□ -1.8
HOXC6P09630 DPPA2P1-201ENST00000428060 556 ntBASIC3.82□□□□□ -1.8
HOXC6P09630 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC3.82□□□□□ -1.8
HOXC6P09630 PGBD4P3-201ENST00000440731 581 ntBASIC3.82□□□□□ -1.8
HOXC6P09630 Z99127.3-201ENST00000448158 395 ntBASIC3.82□□□□□ -1.8
HOXC6P09630 MTCO3P2-201ENST00000457365 171 ntBASIC3.82□□□□□ -1.8
HOXC6P09630 RPL23AP67-201ENST00000465341 474 ntBASIC3.82□□□□□ -1.8
HOXC6P09630 RPS3AP17-201ENST00000472594 777 ntBASIC3.82□□□□□ -1.8
HOXC6P09630 AC092989.1-201ENST00000481235 277 ntBASIC3.82□□□□□ -1.8
HOXC6P09630 AC006445.1-201ENST00000491925 405 ntBASIC3.82□□□□□ -1.8
HOXC6P09630 AC097462.2-201ENST00000504623 481 ntBASIC3.82□□□□□ -1.8
HOXC6P09630 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.82□□□□□ -1.8
HOXC6P09630 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC3.82□□□□□ -1.8
HOXC6P09630 ARL2BPP6-201ENST00000512757 439 ntBASIC3.82□□□□□ -1.8
HOXC6P09630 AC034159.1-201ENST00000513885 583 ntBASIC3.82□□□□□ -1.8
HOXC6P09630 AC022483.1-201ENST00000514020 567 ntBASIC3.82□□□□□ -1.8
HOXC6P09630 HIGD1AP3-201ENST00000515857 278 ntBASIC3.82□□□□□ -1.8
HOXC6P09630 RNU6-1178P-201ENST00000516674 107 ntBASIC3.82□□□□□ -1.8
HOXC6P09630 SNORA18.6-201ENST00000516792 115 ntBASIC3.82□□□□□ -1.8
HOXC6P09630 NARSP2-201ENST00000518524 679 ntBASIC3.82□□□□□ -1.8
HOXC6P09630 AC022878.1-201ENST00000530684 149 ntBASIC3.82□□□□□ -1.8
HOXC6P09630 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.82□□□□□ -1.8
HOXC6P09630 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.82□□□□□ -1.8
HOXC6P09630 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.82□□□□□ -1.8
HOXC6P09630 AC007424.1-203ENST00000554613 687 ntBASIC3.82□□□□□ -1.8
HOXC6P09630 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.82□□□□□ -1.8
HOXC6P09630 AL121576.1-201ENST00000556055 276 ntBASIC3.82□□□□□ -1.8
HOXC6P09630 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.82□□□□□ -1.8
HOXC6P09630 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.82□□□□□ -1.8
HOXC6P09630 AP005205.1-201ENST00000563503 508 ntBASIC3.82□□□□□ -1.8
HOXC6P09630 AC020914.4-201ENST00000597690 277 ntBASIC3.82□□□□□ -1.8
HOXC6P09630 AC112187.2-201ENST00000604345 283 ntBASIC3.82□□□□□ -1.8
HOXC6P09630 AC112191.3-201ENST00000604371 277 ntBASIC3.82□□□□□ -1.8
HOXC6P09630 AP000860.1-201ENST00000605250 559 ntBASIC3.82□□□□□ -1.8
HOXC6P09630 AP001596.2-201ENST00000608410 312 ntBASIC3.82□□□□□ -1.8
HOXC6P09630 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HOXC6P09630 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
HOXC6P09630 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HOXC6P09630 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.82□□□□□ -1.8
HOXC6P09630 AC008725.1-201ENST00000605123 2263 ntBASIC3.82□□□□□ -1.8
HOXC6P09630 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HOXC6P09630 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
HOXC6P09630 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.82□□□□□ -1.8
HOXC6P09630 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.82□□□□□ -1.8
HOXC6P09630 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HOXC6P09630 AC006378.2-201ENST00000623178 2476 ntBASIC3.81□□□□□ -1.8
HOXC6P09630 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.81□□□□□ -1.8
HOXC6P09630 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
HOXC6P09630 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
HOXC6P09630 RNU4-12P-201ENST00000365233 139 ntBASIC3.81□□□□□ -1.8
HOXC6P09630 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HOXC6P09630 RNU6-1293P-201ENST00000384077 107 ntBASIC3.81□□□□□ -1.8
HOXC6P09630 MIR649-201ENST00000384843 97 ntBASIC3.81□□□□□ -1.8
HOXC6P09630 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.81□□□□□ -1.8
HOXC6P09630 RNU6-195P-201ENST00000411352 109 ntBASIC3.81□□□□□ -1.8
HOXC6P09630 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HOXC6P09630 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.81□□□□□ -1.8
HOXC6P09630 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC3.81□□□□□ -1.8
HOXC6P09630 AL513174.1-201ENST00000423182 629 ntBASIC3.81□□□□□ -1.8
HOXC6P09630 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC3.81□□□□□ -1.8
HOXC6P09630 NEK4P1-201ENST00000433383 879 ntBASIC3.81□□□□□ -1.8
HOXC6P09630 GAPDHP17-201ENST00000449858 1001 ntBASIC3.81□□□□□ -1.8
HOXC6P09630 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.81□□□□□ -1.8
HOXC6P09630 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.81□□□□□ -1.8
HOXC6P09630 BX322784.1-201ENST00000455793 1077 ntBASIC3.81□□□□□ -1.8
HOXC6P09630 snoU109.1-201ENST00000459339 135 ntBASIC3.81□□□□□ -1.8
HOXC6P09630 AC146507.1-201ENST00000468335 354 ntBASIC3.81□□□□□ -1.8
HOXC6P09630 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HOXC6P09630 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms