Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC1.97□□□□□ -2.09
COL4A2P08572 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC1.97□□□□□ -2.09
COL4A2P08572 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.97□□□□□ -2.09
COL4A2P08572 RNU6-717P-201ENST00000459076 104 ntBASIC1.97□□□□□ -2.09
COL4A2P08572 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC1.97□□□□□ -2.09
COL4A2P08572 AC015724.1-201ENST00000478577 156 ntBASIC1.97□□□□□ -2.09
COL4A2P08572 RPL36AP21-201ENST00000490372 323 ntBASIC1.97□□□□□ -2.09
COL4A2P08572 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
COL4A2P08572 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC1.97□□□□□ -2.09
COL4A2P08572 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC1.97□□□□□ -2.09
COL4A2P08572 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC1.97□□□□□ -2.09
COL4A2P08572 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC1.97□□□□□ -2.09
COL4A2P08572 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC1.97□□□□□ -2.09
COL4A2P08572 AC079148.1-201ENST00000565944 819 ntBASIC1.97□□□□□ -2.09
COL4A2P08572 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC1.97□□□□□ -2.09
COL4A2P08572 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC1.97□□□□□ -2.09
COL4A2P08572 BPTFP1-201ENST00000579209 492 ntBASIC1.97□□□□□ -2.09
COL4A2P08572 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC1.97□□□□□ -2.09
COL4A2P08572 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC1.97□□□□□ -2.09
COL4A2P08572 VN1R80P-201ENST00000597126 338 ntBASIC1.97□□□□□ -2.09
COL4A2P08572 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC1.97□□□□□ -2.09
COL4A2P08572 AC006023.2-201ENST00000609916 167 ntBASIC1.97□□□□□ -2.09
COL4A2P08572 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC1.96□□□□□ -2.09
COL4A2P08572 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.96□□□□□ -2.09
COL4A2P08572 AP001486.2-201ENST00000561652 5113 ntBASIC1.96□□□□□ -2.1
COL4A2P08572 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
COL4A2P08572 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.96□□□□□ -2.1
COL4A2P08572 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
COL4A2P08572 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
COL4A2P08572 AP001350.1-201ENST00000601906 1524 ntBASIC1.96□□□□□ -2.1
COL4A2P08572 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC1.96□□□□□ -2.1
COL4A2P08572 SFR1P1-201ENST00000403720 688 ntBASIC1.96□□□□□ -2.1
COL4A2P08572 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC1.96□□□□□ -2.1
COL4A2P08572 RPL23AP36-201ENST00000413895 458 ntBASIC1.96□□□□□ -2.1
COL4A2P08572 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC1.96□□□□□ -2.1
COL4A2P08572 OR4K11P-201ENST00000431829 904 ntBASIC1.96□□□□□ -2.1
COL4A2P08572 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC1.96□□□□□ -2.1
COL4A2P08572 SNRPGP3-201ENST00000469405 227 ntBASIC1.96□□□□□ -2.1
COL4A2P08572 AC010301.1-201ENST00000473936 355 ntBASIC1.96□□□□□ -2.1
COL4A2P08572 AC087879.1-201ENST00000474343 374 ntBASIC1.96□□□□□ -2.1
COL4A2P08572 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC1.96□□□□□ -2.1
COL4A2P08572 PRELID3BP4-201ENST00000515476 571 ntBASIC1.96□□□□□ -2.1
COL4A2P08572 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
COL4A2P08572 AC090425.2-201ENST00000608818 501 ntBASIC1.96□□□□□ -2.1
COL4A2P08572 AC073055.1-201ENST00000456901 1621 ntBASIC1.95□□□□□ -2.1
COL4A2P08572 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
COL4A2P08572 AGL-204ENST00000370161 6923 ntTSL 5 BASIC1.95□□□□□ -2.1
COL4A2P08572 SNORA51.2-201ENST00000364595 132 ntBASIC1.95□□□□□ -2.1
COL4A2P08572 RNU6-1181P-201ENST00000384191 106 ntBASIC1.95□□□□□ -2.1
COL4A2P08572 RNU6-441P-201ENST00000384545 106 ntBASIC1.95□□□□□ -2.1
COL4A2P08572 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC1.95□□□□□ -2.1
COL4A2P08572 AL158050.1-201ENST00000416077 457 ntBASIC1.95□□□□□ -2.1
COL4A2P08572 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC1.95□□□□□ -2.1
COL4A2P08572 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC1.95□□□□□ -2.1
COL4A2P08572 ACTR3BP6-201ENST00000422332 1241 ntBASIC1.95□□□□□ -2.1
COL4A2P08572 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC1.95□□□□□ -2.1
COL4A2P08572 RPL21P66-201ENST00000426566 466 ntBASIC1.95□□□□□ -2.1
COL4A2P08572 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
COL4A2P08572 RPL7P55-201ENST00000450522 746 ntBASIC1.95□□□□□ -2.1
COL4A2P08572 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC1.95□□□□□ -2.1
COL4A2P08572 NF1P3-201ENST00000457709 450 ntBASIC1.95□□□□□ -2.1
COL4A2P08572 RPS27P23-201ENST00000487608 251 ntBASIC1.95□□□□□ -2.1
COL4A2P08572 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC1.95□□□□□ -2.1
COL4A2P08572 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC1.95□□□□□ -2.1
COL4A2P08572 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
COL4A2P08572 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
COL4A2P08572 AKIRIN1P1-201ENST00000547384 544 ntBASIC1.95□□□□□ -2.1
COL4A2P08572 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC1.95□□□□□ -2.1
COL4A2P08572 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC1.95□□□□□ -2.1
COL4A2P08572 MIR3683-201ENST00000580847 82 ntBASIC1.95□□□□□ -2.1
COL4A2P08572 AC124283.4-201ENST00000581815 456 ntBASIC1.95□□□□□ -2.1
COL4A2P08572 RPP40P2-201ENST00000603596 712 ntBASIC1.95□□□□□ -2.1
COL4A2P08572 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC1.95□□□□□ -2.1
COL4A2P08572 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC1.95□□□□□ -2.1
COL4A2P08572 AC084768.2-201ENST00000622736 221 ntBASIC1.95□□□□□ -2.1
COL4A2P08572 AP006248.3-201ENST00000623580 594 ntBASIC1.95□□□□□ -2.1
COL4A2P08572 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
COL4A2P08572 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC1.95□□□□□ -2.1
COL4A2P08572 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
COL4A2P08572 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC1.95□□□□□ -2.1
COL4A2P08572 VTRNA1-1-201ENST00000363120 99 ntBASIC1.94□□□□□ -2.1
COL4A2P08572 SNORA7.2-201ENST00000364446 145 ntBASIC1.94□□□□□ -2.1
COL4A2P08572 RNU6-481P-201ENST00000384194 107 ntBASIC1.94□□□□□ -2.1
COL4A2P08572 PTGES3P2-201ENST00000407942 482 ntBASIC1.94□□□□□ -2.1
COL4A2P08572 RNU4-62P-201ENST00000410125 130 ntBASIC1.94□□□□□ -2.1
COL4A2P08572 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC1.94□□□□□ -2.1
COL4A2P08572 DEFB130D-201ENST00000426866 237 ntBASIC1.94□□□□□ -2.1
COL4A2P08572 DPPA2P1-201ENST00000428060 556 ntBASIC1.94□□□□□ -2.1
COL4A2P08572 RPL36P19-201ENST00000430744 301 ntBASIC1.94□□□□□ -2.1
COL4A2P08572 RPL17P35-201ENST00000432217 549 ntBASIC1.94□□□□□ -2.1
COL4A2P08572 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC1.94□□□□□ -2.1
COL4A2P08572 AL034418.1-201ENST00000448675 860 ntBASIC1.94□□□□□ -2.1
COL4A2P08572 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC1.94□□□□□ -2.1
COL4A2P08572 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC1.94□□□□□ -2.1
COL4A2P08572 AL353718.1-201ENST00000451028 517 ntBASIC1.94□□□□□ -2.1
COL4A2P08572 GTF2IP12-201ENST00000456547 356 ntBASIC1.94□□□□□ -2.1
COL4A2P08572 AC092754.2-201ENST00000463506 460 ntBASIC1.94□□□□□ -2.1
COL4A2P08572 MTAPP1-201ENST00000489154 819 ntBASIC1.94□□□□□ -2.1
COL4A2P08572 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
COL4A2P08572 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 135.7 ms