Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC0.91□□□□□ -2.26
APOBP04114 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC0.91□□□□□ -2.26
APOBP04114 AC090740.1-201ENST00000623193 2262 ntBASIC0.91□□□□□ -2.26
APOBP04114 SNRPEP2-201ENST00000397592 279 ntBASIC0.91□□□□□ -2.26
APOBP04114 SLC9B1P2-201ENST00000398120 1184 ntBASIC0.91□□□□□ -2.26
APOBP04114 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC0.91□□□□□ -2.26
APOBP04114 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC0.91□□□□□ -2.26
APOBP04114 AC021146.7-201ENST00000509604 775 ntBASIC0.91□□□□□ -2.26
APOBP04114 AF131216.2-201ENST00000512316 564 ntBASIC0.91□□□□□ -2.26
APOBP04114 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC0.91□□□□□ -2.26
APOBP04114 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC0.91□□□□□ -2.26
APOBP04114 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC0.91□□□□□ -2.26
APOBP04114 AL592494.3-201ENST00000609485 464 ntBASIC0.91□□□□□ -2.26
APOBP04114 RNA5SP167-201ENST00000365461 116 ntBASIC0.9□□□□□ -2.26
APOBP04114 HMGN1P33-201ENST00000432945 451 ntBASIC0.9□□□□□ -2.26
APOBP04114 MTCYBP45-201ENST00000435243 565 ntBASIC0.9□□□□□ -2.26
APOBP04114 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC0.9□□□□□ -2.26
APOBP04114 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC0.9□□□□□ -2.26
APOBP04114 AC097504.2-201ENST00000608088 454 ntBASIC0.9□□□□□ -2.26
APOBP04114 CNOT6LP1-201ENST00000559681 1462 ntBASIC0.9□□□□□ -2.27
APOBP04114 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC0.9□□□□□ -2.27
APOBP04114 AP000926.1-201ENST00000479573 241 ntBASIC0.9□□□□□ -2.27
APOBP04114 AC090453.1-201ENST00000495560 436 ntBASIC0.9□□□□□ -2.27
APOBP04114 HSPE1P3-201ENST00000559254 309 ntBASIC0.9□□□□□ -2.27
APOBP04114 STMN1P1-201ENST00000617809 440 ntBASIC0.9□□□□□ -2.27
APOBP04114 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
APOBP04114 IFNWP4-201ENST00000453148 294 ntBASIC0.9□□□□□ -2.27
APOBP04114 AC104115.2-201ENST00000523026 687 ntBASIC0.9□□□□□ -2.27
APOBP04114 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
APOBP04114 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC0.89□□□□□ -2.27
APOBP04114 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
APOBP04114 STAT4-203ENST00000409995 709 ntTSL 5 BASIC0.89□□□□□ -2.27
APOBP04114 AL445669.1-201ENST00000426743 755 ntBASIC0.89□□□□□ -2.27
APOBP04114 AL645568.3-201ENST00000433683 316 ntBASIC0.89□□□□□ -2.27
APOBP04114 AC009474.2-201ENST00000451383 136 ntBASIC0.89□□□□□ -2.27
APOBP04114 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC0.89□□□□□ -2.27
APOBP04114 AC109471.1-201ENST00000511631 612 ntBASIC0.89□□□□□ -2.27
APOBP04114 MIR5694-201ENST00000581190 76 ntBASIC0.89□□□□□ -2.27
APOBP04114 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.89□□□□□ -2.27
APOBP04114 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
APOBP04114 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC0.89□□□□□ -2.27
APOBP04114 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC0.89□□□□□ -2.27
APOBP04114 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC0.89□□□□□ -2.27
APOBP04114 MIR365B-201ENST00000362317 111 ntBASIC0.89□□□□□ -2.27
APOBP04114 CYCSP33-201ENST00000414485 327 ntBASIC0.89□□□□□ -2.27
APOBP04114 RPL7P53-201ENST00000421245 739 ntBASIC0.89□□□□□ -2.27
APOBP04114 SUMO1P4-201ENST00000429430 302 ntBASIC0.89□□□□□ -2.27
APOBP04114 AC005297.2-201ENST00000450430 606 ntBASIC0.89□□□□□ -2.27
APOBP04114 AC021382.1-201ENST00000483523 359 ntBASIC0.89□□□□□ -2.27
APOBP04114 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
APOBP04114 AC114801.2-201ENST00000503825 781 ntBASIC0.89□□□□□ -2.27
APOBP04114 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC0.89□□□□□ -2.27
APOBP04114 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC0.89□□□□□ -2.27
APOBP04114 AC007115.1-201ENST00000546853 234 ntBASIC0.89□□□□□ -2.27
APOBP04114 PRELID2P1-201ENST00000552837 301 ntBASIC0.89□□□□□ -2.27
APOBP04114 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC0.89□□□□□ -2.27
APOBP04114 ZNF209P-201ENST00000593450 2304 ntBASIC0.89□□□□□ -2.27
APOBP04114 AC234781.2-201ENST00000426370 994 ntBASIC0.89□□□□□ -2.27
APOBP04114 FTH1P12-201ENST00000432137 551 ntBASIC0.89□□□□□ -2.27
APOBP04114 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC0.89□□□□□ -2.27
APOBP04114 AC011979.1-201ENST00000472300 483 ntBASIC0.89□□□□□ -2.27
APOBP04114 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC0.89□□□□□ -2.27
APOBP04114 U6.98-201ENST00000637157 84 ntBASIC0.89□□□□□ -2.27
APOBP04114 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC0.89□□□□□ -2.27
APOBP04114 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC0.89□□□□□ -2.27
APOBP04114 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC0.89□□□□□ -2.27
APOBP04114 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC0.89□□□□□ -2.27
APOBP04114 AL391646.1-201ENST00000603860 190 ntBASIC0.89□□□□□ -2.27
APOBP04114 XIST_intron.1-201ENST00000619444 68 ntBASIC0.89□□□□□ -2.27
APOBP04114 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC0.88□□□□□ -2.27
APOBP04114 DEFB109C-201ENST00000382575 264 ntBASIC0.88□□□□□ -2.27
APOBP04114 DEFB109B-201ENST00000382656 264 ntBASIC0.88□□□□□ -2.27
APOBP04114 RNU2-25P-201ENST00000411041 191 ntBASIC0.88□□□□□ -2.27
APOBP04114 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC0.88□□□□□ -2.27
APOBP04114 RPS29P20-201ENST00000489592 171 ntBASIC0.88□□□□□ -2.27
APOBP04114 RNU6-405P-201ENST00000516637 110 ntBASIC0.88□□□□□ -2.27
APOBP04114 RNU6-467P-201ENST00000517027 110 ntBASIC0.88□□□□□ -2.27
APOBP04114 NTS-203ENST00000551529 801 ntTSL 3 BASIC0.88□□□□□ -2.27
APOBP04114 YWHAQP7-201ENST00000603536 658 ntBASIC0.88□□□□□ -2.27
APOBP04114 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC0.88□□□□□ -2.27
APOBP04114 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC0.88□□□□□ -2.27
APOBP04114 Y_RNA.30-201ENST00000362572 97 ntBASIC0.88□□□□□ -2.27
APOBP04114 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC0.88□□□□□ -2.27
APOBP04114 RNU6-113P-201ENST00000516653 101 ntBASIC0.88□□□□□ -2.27
APOBP04114 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC0.88□□□□□ -2.27
APOBP04114 SMILR-201ENST00000533992 553 ntTSL 4 BASIC0.88□□□□□ -2.27
APOBP04114 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC0.88□□□□□ -2.27
APOBP04114 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC0.88□□□□□ -2.27
APOBP04114 AC109583.1-201ENST00000432156 268 ntBASIC0.88□□□□□ -2.27
APOBP04114 TRIM60P13-201ENST00000432350 1283 ntBASIC0.88□□□□□ -2.27
APOBP04114 Y_RNA.681-201ENST00000516445 113 ntBASIC0.88□□□□□ -2.27
APOBP04114 RNU1-104P-201ENST00000517280 175 ntBASIC0.88□□□□□ -2.27
APOBP04114 AC087373.1-201ENST00000524920 491 ntBASIC0.88□□□□□ -2.27
APOBP04114 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC0.88□□□□□ -2.27
APOBP04114 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC0.88□□□□□ -2.27
APOBP04114 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.88□□□□□ -2.27
APOBP04114 MIR6078-201ENST00000611069 100 ntBASIC0.88□□□□□ -2.27
APOBP04114 AL354685.2-201ENST00000448218 1447 ntBASIC0.88□□□□□ -2.27
APOBP04114 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
APOBP04114 MTND5P25-201ENST00000430499 799 ntBASIC0.88□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms