Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 AC245884.12-201ENST00000615364 59 ntBASIC2.34□□□□□ -2.03
APOEP02649 MIR6132-201ENST00000622083 109 ntBASIC2.34□□□□□ -2.03
APOEP02649 AL160394.1-201ENST00000624765 724 ntBASIC2.34□□□□□ -2.03
APOEP02649 CU459211.1-201ENST00000635667 749 ntBASIC2.34□□□□□ -2.03
APOEP02649 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.34□□□□□ -2.04
APOEP02649 AC087359.1-201ENST00000508335 1740 ntBASIC2.34□□□□□ -2.04
APOEP02649 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
APOEP02649 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.33□□□□□ -2.04
APOEP02649 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
APOEP02649 OR5H15-201ENST00000383696 930 ntBASIC2.33□□□□□ -2.04
APOEP02649 RNU1-52P-201ENST00000384190 164 ntBASIC2.33□□□□□ -2.04
APOEP02649 SNORA51.11-201ENST00000384442 131 ntBASIC2.33□□□□□ -2.04
APOEP02649 MIR221-201ENST00000385135 110 ntBASIC2.33□□□□□ -2.04
APOEP02649 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
APOEP02649 AL591416.1-201ENST00000404015 867 ntBASIC2.33□□□□□ -2.04
APOEP02649 RNA5SP425-201ENST00000410336 112 ntBASIC2.33□□□□□ -2.04
APOEP02649 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC2.33□□□□□ -2.04
APOEP02649 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.33□□□□□ -2.04
APOEP02649 WARS2P1-201ENST00000429678 537 ntBASIC2.33□□□□□ -2.04
APOEP02649 UBE2V2P3-201ENST00000433562 437 ntBASIC2.33□□□□□ -2.04
APOEP02649 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC2.33□□□□□ -2.04
APOEP02649 RPL32P28-201ENST00000443577 397 ntBASIC2.33□□□□□ -2.04
APOEP02649 snoU13.28-201ENST00000459235 104 ntBASIC2.33□□□□□ -2.04
APOEP02649 RPL31P60-201ENST00000478450 367 ntBASIC2.33□□□□□ -2.04
APOEP02649 AC093767.1-201ENST00000504523 156 ntBASIC2.33□□□□□ -2.04
APOEP02649 AC008549.1-201ENST00000512900 643 ntBASIC2.33□□□□□ -2.04
APOEP02649 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
APOEP02649 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC2.33□□□□□ -2.04
APOEP02649 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC2.33□□□□□ -2.04
APOEP02649 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
APOEP02649 AC009127.3-201ENST00000570531 403 ntBASIC2.33□□□□□ -2.04
APOEP02649 AC011260.1-201ENST00000578420 472 ntBASIC2.33□□□□□ -2.04
APOEP02649 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC2.33□□□□□ -2.04
APOEP02649 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.33□□□□□ -2.04
APOEP02649 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
APOEP02649 ZNF720P1-201ENST00000562403 1939 ntBASIC2.32□□□□□ -2.04
APOEP02649 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
APOEP02649 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.32□□□□□ -2.04
APOEP02649 AC010680.1-201ENST00000590024 3590 ntBASIC2.32□□□□□ -2.04
APOEP02649 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
APOEP02649 MIRLET7G-201ENST00000362280 84 ntBASIC2.32□□□□□ -2.04
APOEP02649 RNU6-301P-201ENST00000384277 107 ntBASIC2.32□□□□□ -2.04
APOEP02649 MIR525-201ENST00000384978 85 ntBASIC2.32□□□□□ -2.04
APOEP02649 ZNF736P10Y-201ENST00000403990 1110 ntBASIC2.32□□□□□ -2.04
APOEP02649 AL023807.1-201ENST00000407932 359 ntBASIC2.32□□□□□ -2.04
APOEP02649 SNORA3.2-201ENST00000408221 125 ntBASIC2.32□□□□□ -2.04
APOEP02649 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC2.32□□□□□ -2.04
APOEP02649 TATDN1P1-201ENST00000414123 891 ntBASIC2.32□□□□□ -2.04
APOEP02649 ZNF92P1Y-201ENST00000415010 1191 ntBASIC2.32□□□□□ -2.04
APOEP02649 AL009174.1-201ENST00000426577 416 ntBASIC2.32□□□□□ -2.04
APOEP02649 AC018634.1-201ENST00000437554 401 ntBASIC2.32□□□□□ -2.04
APOEP02649 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
APOEP02649 MTND2P6-201ENST00000455337 1030 ntBASIC2.32□□□□□ -2.04
APOEP02649 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.32□□□□□ -2.04
APOEP02649 OR52A4P-202ENST00000481634 799 ntBASIC2.32□□□□□ -2.04
APOEP02649 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
APOEP02649 AC011352.3-201ENST00000505162 593 ntBASIC2.32□□□□□ -2.04
APOEP02649 ANXA2P1-201ENST00000505539 926 ntBASIC2.32□□□□□ -2.04
APOEP02649 TTC39CP1-201ENST00000512513 755 ntBASIC2.32□□□□□ -2.04
APOEP02649 SNRPGP18-201ENST00000553000 214 ntBASIC2.32□□□□□ -2.04
APOEP02649 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.32□□□□□ -2.04
APOEP02649 AP002826.1-201ENST00000608835 315 ntBASIC2.32□□□□□ -2.04
APOEP02649 ZNF658B-202ENST00000615961 3375 ntBASIC2.32□□□□□ -2.04
APOEP02649 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.32□□□□□ -2.04
APOEP02649 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
APOEP02649 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.31□□□□□ -2.04
APOEP02649 RNU4-52P-201ENST00000384209 138 ntBASIC2.31□□□□□ -2.04
APOEP02649 RNU6-1197P-201ENST00000391183 107 ntBASIC2.31□□□□□ -2.04
APOEP02649 RNU4-72P-201ENST00000410754 173 ntBASIC2.31□□□□□ -2.04
APOEP02649 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.31□□□□□ -2.04
APOEP02649 Z98742.3-201ENST00000418637 326 ntBASIC2.31□□□□□ -2.04
APOEP02649 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.31□□□□□ -2.04
APOEP02649 UBE2D3P1-201ENST00000436669 444 ntBASIC2.31□□□□□ -2.04
APOEP02649 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.31□□□□□ -2.04
APOEP02649 WASF1P1-201ENST00000447560 1131 ntBASIC2.31□□□□□ -2.04
APOEP02649 AL353705.4-201ENST00000449661 238 ntBASIC2.31□□□□□ -2.04
APOEP02649 snoU109.4-201ENST00000458953 143 ntBASIC2.31□□□□□ -2.04
APOEP02649 NAP1L1P3-201ENST00000462291 880 ntBASIC2.31□□□□□ -2.04
APOEP02649 RPL31P41-201ENST00000477967 372 ntBASIC2.31□□□□□ -2.04
APOEP02649 TRBV12-1-201ENST00000479785 344 ntBASIC2.31□□□□□ -2.04
APOEP02649 AC079804.2-201ENST00000490376 200 ntBASIC2.31□□□□□ -2.04
APOEP02649 AC008427.1-201ENST00000503102 655 ntBASIC2.31□□□□□ -2.04
APOEP02649 AC006390.1-201ENST00000508068 283 ntBASIC2.31□□□□□ -2.04
APOEP02649 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC2.31□□□□□ -2.04
APOEP02649 NDUFS5P6-201ENST00000529136 295 ntBASIC2.31□□□□□ -2.04
APOEP02649 AP001317.1-201ENST00000531194 960 ntBASIC2.31□□□□□ -2.04
APOEP02649 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
APOEP02649 AC026464.5-201ENST00000562497 722 ntBASIC2.31□□□□□ -2.04
APOEP02649 AC010738.1-201ENST00000604970 987 ntBASIC2.31□□□□□ -2.04
APOEP02649 AP000254.1-201ENST00000609934 520 ntBASIC2.31□□□□□ -2.04
APOEP02649 AC096586.1-201ENST00000610267 561 ntBASIC2.31□□□□□ -2.04
APOEP02649 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
APOEP02649 UCA1.1-201ENST00000620952 75 ntBASIC2.31□□□□□ -2.04
APOEP02649 ZNF663P-202ENST00000641770 1131 ntBASIC2.31□□□□□ -2.04
APOEP02649 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.31□□□□□ -2.04
APOEP02649 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
APOEP02649 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
APOEP02649 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
APOEP02649 SNORD51.1-201ENST00000365405 77 ntBASIC2.3□□□□□ -2.04
APOEP02649 RNU6-1072P-201ENST00000384703 107 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms