Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 AC104985.2-201ENST00000620598 500 ntBASIC3.34□□□□□ -1.88
COL2A1P02458 PCMTD1P7-201ENST00000634506 357 ntBASIC3.34□□□□□ -1.88
COL2A1P02458 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.34□□□□□ -1.88
COL2A1P02458 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
COL2A1P02458 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
COL2A1P02458 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC3.33□□□□□ -1.88
COL2A1P02458 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.33□□□□□ -1.88
COL2A1P02458 AP005901.5-201ENST00000545779 1796 ntBASIC3.33□□□□□ -1.88
COL2A1P02458 RNU6-560P-201ENST00000364007 108 ntBASIC3.33□□□□□ -1.88
COL2A1P02458 AL138827.1-201ENST00000402666 306 ntBASIC3.33□□□□□ -1.88
COL2A1P02458 HMGB3P31-201ENST00000413333 595 ntBASIC3.33□□□□□ -1.88
COL2A1P02458 AL592148.1-201ENST00000413568 445 ntBASIC3.33□□□□□ -1.88
COL2A1P02458 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.33□□□□□ -1.88
COL2A1P02458 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.33□□□□□ -1.88
COL2A1P02458 AC010975.2-201ENST00000427781 588 ntBASIC3.33□□□□□ -1.88
COL2A1P02458 MED14P1-201ENST00000430517 648 ntBASIC3.33□□□□□ -1.88
COL2A1P02458 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
COL2A1P02458 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC3.33□□□□□ -1.88
COL2A1P02458 AL513328.1-201ENST00000446460 224 ntBASIC3.33□□□□□ -1.88
COL2A1P02458 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.33□□□□□ -1.88
COL2A1P02458 AC093392.2-201ENST00000450682 337 ntBASIC3.33□□□□□ -1.88
COL2A1P02458 MTND2P24-201ENST00000453434 806 ntBASIC3.33□□□□□ -1.88
COL2A1P02458 AL035407.2-201ENST00000454090 378 ntBASIC3.33□□□□□ -1.88
COL2A1P02458 SNORD109B-201ENST00000458961 67 ntBASIC3.33□□□□□ -1.88
COL2A1P02458 SNORD109A-201ENST00000459128 67 ntBASIC3.33□□□□□ -1.88
COL2A1P02458 snoU13.15-201ENST00000459407 104 ntBASIC3.33□□□□□ -1.88
COL2A1P02458 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.33□□□□□ -1.88
COL2A1P02458 RNU6-1178P-201ENST00000516674 107 ntBASIC3.33□□□□□ -1.88
COL2A1P02458 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.33□□□□□ -1.88
COL2A1P02458 AP001207.1-201ENST00000524051 481 ntBASIC3.33□□□□□ -1.88
COL2A1P02458 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC3.33□□□□□ -1.88
COL2A1P02458 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.33□□□□□ -1.88
COL2A1P02458 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.33□□□□□ -1.88
COL2A1P02458 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC3.33□□□□□ -1.88
COL2A1P02458 SERPINE4P-201ENST00000554978 281 ntBASIC3.33□□□□□ -1.88
COL2A1P02458 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.33□□□□□ -1.88
COL2A1P02458 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC3.33□□□□□ -1.88
COL2A1P02458 MIR3912-201ENST00000577566 105 ntBASIC3.33□□□□□ -1.88
COL2A1P02458 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.33□□□□□ -1.88
COL2A1P02458 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC3.33□□□□□ -1.88
COL2A1P02458 AP003117.2-201ENST00000606010 545 ntBASIC3.33□□□□□ -1.88
COL2A1P02458 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC3.33□□□□□ -1.88
COL2A1P02458 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
COL2A1P02458 AC007014.2-201ENST00000615581 479 ntBASIC3.33□□□□□ -1.88
COL2A1P02458 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
COL2A1P02458 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.33□□□□□ -1.88
COL2A1P02458 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.32□□□□□ -1.88
COL2A1P02458 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
COL2A1P02458 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.32□□□□□ -1.88
COL2A1P02458 AC108206.1-201ENST00000570186 4159 ntBASIC3.32□□□□□ -1.88
COL2A1P02458 RNU6-660P-201ENST00000364566 109 ntBASIC3.32□□□□□ -1.88
COL2A1P02458 MRPL50P2-201ENST00000416821 482 ntBASIC3.32□□□□□ -1.88
COL2A1P02458 AC027644.1-201ENST00000419595 298 ntBASIC3.32□□□□□ -1.88
COL2A1P02458 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC3.32□□□□□ -1.88
COL2A1P02458 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
COL2A1P02458 AC004865.1-201ENST00000442276 1003 ntBASIC3.32□□□□□ -1.88
COL2A1P02458 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.32□□□□□ -1.88
COL2A1P02458 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC3.32□□□□□ -1.88
COL2A1P02458 AL359385.1-201ENST00000456509 365 ntBASIC3.32□□□□□ -1.88
COL2A1P02458 CDC42P1-201ENST00000456658 548 ntBASIC3.32□□□□□ -1.88
COL2A1P02458 RPS3P1-201ENST00000456781 192 ntBASIC3.32□□□□□ -1.88
COL2A1P02458 AL121769.1-201ENST00000469473 401 ntBASIC3.32□□□□□ -1.88
COL2A1P02458 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.32□□□□□ -1.88
COL2A1P02458 AC025459.1-201ENST00000504072 156 ntBASIC3.32□□□□□ -1.88
COL2A1P02458 AC023632.1-201ENST00000518463 375 ntBASIC3.32□□□□□ -1.88
COL2A1P02458 SMARCE1P4-201ENST00000523647 241 ntBASIC3.32□□□□□ -1.88
COL2A1P02458 AC124293.1-201ENST00000530034 493 ntBASIC3.32□□□□□ -1.88
COL2A1P02458 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC3.32□□□□□ -1.88
COL2A1P02458 NIFKP8-201ENST00000560500 874 ntBASIC3.32□□□□□ -1.88
COL2A1P02458 MIR5047-201ENST00000579212 100 ntBASIC3.32□□□□□ -1.88
COL2A1P02458 BNIP3P26-201ENST00000600827 554 ntBASIC3.32□□□□□ -1.88
COL2A1P02458 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC3.32□□□□□ -1.88
COL2A1P02458 MTCO2P22-201ENST00000603246 681 ntBASIC3.32□□□□□ -1.88
COL2A1P02458 AP000907.4-201ENST00000604143 237 ntBASIC3.32□□□□□ -1.88
COL2A1P02458 AC006566.1-201ENST00000608943 513 ntBASIC3.32□□□□□ -1.88
COL2A1P02458 AL357080.1-201ENST00000617394 239 ntBASIC3.32□□□□□ -1.88
COL2A1P02458 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3.32□□□□□ -1.88
COL2A1P02458 AC010338.1-201ENST00000621823 717 ntBASIC3.32□□□□□ -1.88
COL2A1P02458 MFSD8-245ENST00000641743 948 ntBASIC3.32□□□□□ -1.88
COL2A1P02458 OR5H6-203ENST00000642105 978 ntBASIC3.32□□□□□ -1.88
COL2A1P02458 AC046144.1-201ENST00000478559 1853 ntBASIC3.32□□□□□ -1.88
COL2A1P02458 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
COL2A1P02458 RNU6ATAC3P-201ENST00000387974 126 ntBASIC3.31□□□□□ -1.88
COL2A1P02458 AL109913.1-201ENST00000421173 514 ntBASIC3.31□□□□□ -1.88
COL2A1P02458 OFD1P2Y-201ENST00000421895 1149 ntBASIC3.31□□□□□ -1.88
COL2A1P02458 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.31□□□□□ -1.88
COL2A1P02458 RPL23AP4-201ENST00000427757 463 ntBASIC3.31□□□□□ -1.88
COL2A1P02458 UBE2V1P8-201ENST00000437166 265 ntBASIC3.31□□□□□ -1.88
COL2A1P02458 AC093155.1-201ENST00000440164 826 ntBASIC3.31□□□□□ -1.88
COL2A1P02458 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC3.31□□□□□ -1.88
COL2A1P02458 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
COL2A1P02458 AC079776.3-201ENST00000450665 370 ntBASIC3.31□□□□□ -1.88
COL2A1P02458 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.31□□□□□ -1.88
COL2A1P02458 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC3.31□□□□□ -1.88
COL2A1P02458 AC116337.2-201ENST00000477662 156 ntBASIC3.31□□□□□ -1.88
COL2A1P02458 AC093278.1-201ENST00000494700 600 ntBASIC3.31□□□□□ -1.88
COL2A1P02458 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC3.31□□□□□ -1.88
COL2A1P02458 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.31□□□□□ -1.88
COL2A1P02458 PRELID3BP4-201ENST00000515476 571 ntBASIC3.31□□□□□ -1.88
COL2A1P02458 RNA5SP24-201ENST00000516478 95 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 150.9 ms