Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 ST13P20-201ENST00000447996 1065 ntBASIC3.55□□□□□ -1.84
LDLRP01130 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC3.55□□□□□ -1.84
LDLRP01130 OR6K1P-201ENST00000456766 971 ntBASIC3.55□□□□□ -1.84
LDLRP01130 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC3.55□□□□□ -1.84
LDLRP01130 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.55□□□□□ -1.84
LDLRP01130 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC3.55□□□□□ -1.84
LDLRP01130 AC106872.3-201ENST00000495104 446 ntBASIC3.55□□□□□ -1.84
LDLRP01130 PCBP2P3-201ENST00000509726 843 ntBASIC3.55□□□□□ -1.84
LDLRP01130 RNA5SP208-201ENST00000516156 78 ntBASIC3.55□□□□□ -1.84
LDLRP01130 RNA5SP179-201ENST00000517284 121 ntBASIC3.55□□□□□ -1.84
LDLRP01130 AC087883.1-201ENST00000551882 391 ntBASIC3.55□□□□□ -1.84
LDLRP01130 ZNF519P3-201ENST00000557158 1032 ntBASIC3.55□□□□□ -1.84
LDLRP01130 AC136619.2-201ENST00000563361 631 ntBASIC3.55□□□□□ -1.84
LDLRP01130 AC106782.4-201ENST00000568264 210 ntBASIC3.55□□□□□ -1.84
LDLRP01130 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.55□□□□□ -1.84
LDLRP01130 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.55□□□□□ -1.84
LDLRP01130 AC090615.1-201ENST00000577519 154 ntBASIC3.55□□□□□ -1.84
LDLRP01130 AC090616.5-202ENST00000582111 297 ntBASIC3.55□□□□□ -1.84
LDLRP01130 AL606834.2-201ENST00000602954 668 ntBASIC3.55□□□□□ -1.84
LDLRP01130 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
LDLRP01130 AL365503.1-201ENST00000605247 905 ntBASIC3.55□□□□□ -1.84
LDLRP01130 AC011816.2-201ENST00000607089 556 ntBASIC3.55□□□□□ -1.84
LDLRP01130 AC007684.1-201ENST00000609671 477 ntBASIC3.55□□□□□ -1.84
LDLRP01130 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.55□□□□□ -1.84
LDLRP01130 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.55□□□□□ -1.84
LDLRP01130 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.55□□□□□ -1.84
LDLRP01130 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.55□□□□□ -1.84
LDLRP01130 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.55□□□□□ -1.84
LDLRP01130 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
LDLRP01130 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.55□□□□□ -1.84
LDLRP01130 ATP8A2P3-201ENST00000426792 1536 ntBASIC3.54□□□□□ -1.84
LDLRP01130 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.54□□□□□ -1.84
LDLRP01130 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
LDLRP01130 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
LDLRP01130 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
LDLRP01130 AL021368.2-201ENST00000606125 5352 ntBASIC3.54□□□□□ -1.84
LDLRP01130 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.54□□□□□ -1.84
LDLRP01130 AL161781.1-201ENST00000354277 403 ntBASIC3.54□□□□□ -1.84
LDLRP01130 SNORA7.2-201ENST00000364446 145 ntBASIC3.54□□□□□ -1.84
LDLRP01130 U1.1-201ENST00000384101 164 ntBASIC3.54□□□□□ -1.84
LDLRP01130 SNORD51-201ENST00000384320 80 ntBASIC3.54□□□□□ -1.84
LDLRP01130 RNU6-837P-201ENST00000391056 108 ntBASIC3.54□□□□□ -1.84
LDLRP01130 AL356421.1-201ENST00000403255 413 ntBASIC3.54□□□□□ -1.84
LDLRP01130 AL583834.1-201ENST00000406943 343 ntBASIC3.54□□□□□ -1.84
LDLRP01130 MTCO1P17-201ENST00000411522 491 ntBASIC3.54□□□□□ -1.84
LDLRP01130 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.54□□□□□ -1.84
LDLRP01130 EIF1P1-201ENST00000421436 341 ntBASIC3.54□□□□□ -1.84
LDLRP01130 AL513174.1-201ENST00000423182 629 ntBASIC3.54□□□□□ -1.84
LDLRP01130 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC3.54□□□□□ -1.84
LDLRP01130 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.54□□□□□ -1.84
LDLRP01130 AL445669.1-201ENST00000426743 755 ntBASIC3.54□□□□□ -1.84
LDLRP01130 MTCO2P19-201ENST00000427513 598 ntBASIC3.54□□□□□ -1.84
LDLRP01130 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.54□□□□□ -1.84
LDLRP01130 AL159987.2-201ENST00000432754 307 ntBASIC3.54□□□□□ -1.84
LDLRP01130 AL596276.1-201ENST00000434465 418 ntBASIC3.54□□□□□ -1.84
LDLRP01130 AL353691.1-201ENST00000451332 387 ntBASIC3.54□□□□□ -1.84
LDLRP01130 snoU13.8-201ENST00000458890 104 ntBASIC3.54□□□□□ -1.84
LDLRP01130 HMGB1P25-201ENST00000468402 607 ntBASIC3.54□□□□□ -1.84
LDLRP01130 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.54□□□□□ -1.84
LDLRP01130 AC104563.1-201ENST00000476147 376 ntBASIC3.54□□□□□ -1.84
LDLRP01130 AC106707.2-201ENST00000484182 374 ntBASIC3.54□□□□□ -1.84
LDLRP01130 RPS3AP50-201ENST00000487064 803 ntBASIC3.54□□□□□ -1.84
LDLRP01130 AP001025.2-201ENST00000490908 477 ntBASIC3.54□□□□□ -1.84
LDLRP01130 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.54□□□□□ -1.84
LDLRP01130 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.54□□□□□ -1.84
LDLRP01130 AC116353.2-201ENST00000505332 712 ntBASIC3.54□□□□□ -1.84
LDLRP01130 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.54□□□□□ -1.84
LDLRP01130 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.54□□□□□ -1.84
LDLRP01130 HMGN1P11-201ENST00000508668 303 ntBASIC3.54□□□□□ -1.84
LDLRP01130 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.54□□□□□ -1.84
LDLRP01130 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.54□□□□□ -1.84
LDLRP01130 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.54□□□□□ -1.84
LDLRP01130 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.54□□□□□ -1.84
LDLRP01130 ABBA01006766.1-201ENST00000584728 294 ntBASIC3.54□□□□□ -1.84
LDLRP01130 AC091135.1-201ENST00000585943 307 ntBASIC3.54□□□□□ -1.84
LDLRP01130 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.54□□□□□ -1.84
LDLRP01130 PRELID3BP8-201ENST00000604148 295 ntBASIC3.54□□□□□ -1.84
LDLRP01130 AC091167.4-201ENST00000605079 184 ntBASIC3.54□□□□□ -1.84
LDLRP01130 NDUFA8P1-201ENST00000605525 367 ntBASIC3.54□□□□□ -1.84
LDLRP01130 AC092354.1-201ENST00000606057 376 ntBASIC3.54□□□□□ -1.84
LDLRP01130 XIST_intron.1-201ENST00000619444 68 ntBASIC3.54□□□□□ -1.84
LDLRP01130 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.54□□□□□ -1.84
LDLRP01130 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC3.54□□□□□ -1.84
LDLRP01130 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.54□□□□□ -1.84
LDLRP01130 OTUD4P1-201ENST00000237841 3067 ntBASIC3.54□□□□□ -1.84
LDLRP01130 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
LDLRP01130 AC004520.1-201ENST00000608362 1413 ntBASIC3.53□□□□□ -1.84
LDLRP01130 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
LDLRP01130 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
LDLRP01130 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.53□□□□□ -1.84
LDLRP01130 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
LDLRP01130 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
LDLRP01130 AC092447.7-201ENST00000422212 1621 ntBASIC3.53□□□□□ -1.84
LDLRP01130 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
LDLRP01130 RNU6-853P-201ENST00000364306 107 ntBASIC3.53□□□□□ -1.84
LDLRP01130 Y_RNA.234-201ENST00000364409 97 ntBASIC3.53□□□□□ -1.84
LDLRP01130 U8.14-201ENST00000390843 143 ntBASIC3.53□□□□□ -1.84
LDLRP01130 RN7SKP266-201ENST00000410232 287 ntBASIC3.53□□□□□ -1.84
LDLRP01130 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC3.53□□□□□ -1.84
LDLRP01130 AIMP1P1-201ENST00000418670 937 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 128.3 ms