Protein–RNA interactions for Protein: O95343

SIX3, Homeobox protein SIX3, humanhuman

Predicted RBP Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3O95343 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.27□□□□□ -1.89
SIX3O95343 HMGB3P11-201ENST00000440127 604 ntBASIC3.27□□□□□ -1.89
SIX3O95343 AC009237.8-201ENST00000445492 379 ntBASIC3.27□□□□□ -1.89
SIX3O95343 AC115115.1-201ENST00000449927 248 ntBASIC3.27□□□□□ -1.89
SIX3O95343 RBMY2UP-201ENST00000453474 324 ntBASIC3.27□□□□□ -1.89
SIX3O95343 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC3.27□□□□□ -1.89
SIX3O95343 AL031183.1-201ENST00000457667 207 ntBASIC3.27□□□□□ -1.89
SIX3O95343 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.27□□□□□ -1.89
SIX3O95343 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.27□□□□□ -1.89
SIX3O95343 LINC00888-204ENST00000487386 421 ntBASIC3.27□□□□□ -1.89
SIX3O95343 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC3.27□□□□□ -1.89
SIX3O95343 AC010486.1-201ENST00000511793 424 ntBASIC3.27□□□□□ -1.89
SIX3O95343 RN7SKP287-201ENST00000516546 266 ntBASIC3.27□□□□□ -1.89
SIX3O95343 RNU6-678P-201ENST00000516832 109 ntBASIC3.27□□□□□ -1.89
SIX3O95343 SNORA31.22-201ENST00000517204 135 ntBASIC3.27□□□□□ -1.89
SIX3O95343 AC104027.1-201ENST00000521887 300 ntBASIC3.27□□□□□ -1.89
SIX3O95343 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.27□□□□□ -1.89
SIX3O95343 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.27□□□□□ -1.89
SIX3O95343 AC004024.1-201ENST00000549244 247 ntBASIC3.27□□□□□ -1.89
SIX3O95343 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.27□□□□□ -1.89
SIX3O95343 AC124947.2-202ENST00000552735 133 ntBASIC3.27□□□□□ -1.89
SIX3O95343 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.27□□□□□ -1.89
SIX3O95343 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.27□□□□□ -1.89
SIX3O95343 MTCO3P24-201ENST00000572729 782 ntBASIC3.27□□□□□ -1.89
SIX3O95343 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.27□□□□□ -1.89
SIX3O95343 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.27□□□□□ -1.89
SIX3O95343 MIR4999-201ENST00000585029 91 ntBASIC3.27□□□□□ -1.89
SIX3O95343 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.27□□□□□ -1.89
SIX3O95343 AC006557.5-201ENST00000603126 811 ntBASIC3.27□□□□□ -1.89
SIX3O95343 AC024560.3-201ENST00000608482 349 ntBASIC3.27□□□□□ -1.89
SIX3O95343 AC027309.3-201ENST00000623419 351 ntBASIC3.27□□□□□ -1.89
SIX3O95343 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC3.27□□□□□ -1.89
SIX3O95343 MIR7153-201ENST00000637758 57 ntBASIC3.27□□□□□ -1.89
SIX3O95343 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SIX3O95343 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SIX3O95343 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.27□□□□□ -1.89
SIX3O95343 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
SIX3O95343 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.26□□□□□ -1.89
SIX3O95343 CR383658.2-201ENST00000547576 1525 ntBASIC3.26□□□□□ -1.89
SIX3O95343 AC004972.1-201ENST00000623934 2209 ntBASIC3.26□□□□□ -1.89
SIX3O95343 RNU6-223P-201ENST00000362830 107 ntBASIC3.26□□□□□ -1.89
SIX3O95343 Y_RNA.302-201ENST00000364997 102 ntBASIC3.26□□□□□ -1.89
SIX3O95343 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.26□□□□□ -1.89
SIX3O95343 AL590084.2-201ENST00000401481 382 ntBASIC3.26□□□□□ -1.89
SIX3O95343 TXNP7-201ENST00000406296 293 ntBASIC3.26□□□□□ -1.89
SIX3O95343 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.26□□□□□ -1.89
SIX3O95343 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.26□□□□□ -1.89
SIX3O95343 FAM103A2P-201ENST00000444122 354 ntBASIC3.26□□□□□ -1.89
SIX3O95343 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.26□□□□□ -1.89
SIX3O95343 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.26□□□□□ -1.89
SIX3O95343 AP1S2P1-201ENST00000457344 379 ntBASIC3.26□□□□□ -1.89
SIX3O95343 RPL32P34-201ENST00000486380 400 ntBASIC3.26□□□□□ -1.89
SIX3O95343 LTV1P1-201ENST00000510683 1237 ntBASIC3.26□□□□□ -1.89
SIX3O95343 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.26□□□□□ -1.89
SIX3O95343 RNU6-237P-201ENST00000515985 71 ntBASIC3.26□□□□□ -1.89
SIX3O95343 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.26□□□□□ -1.89
SIX3O95343 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SIX3O95343 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
SIX3O95343 AC023538.1-201ENST00000534576 736 ntBASIC3.26□□□□□ -1.89
SIX3O95343 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.26□□□□□ -1.89
SIX3O95343 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.26□□□□□ -1.89
SIX3O95343 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC3.26□□□□□ -1.89
SIX3O95343 OR4H12P-201ENST00000556269 907 ntBASIC3.26□□□□□ -1.89
SIX3O95343 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC3.26□□□□□ -1.89
SIX3O95343 ANKRD36BP2-206ENST00000575193 1245 ntBASIC3.26□□□□□ -1.89
SIX3O95343 MIR544B-201ENST00000582372 78 ntBASIC3.26□□□□□ -1.89
SIX3O95343 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC3.26□□□□□ -1.89
SIX3O95343 MIR3922-201ENST00000585192 84 ntBASIC3.26□□□□□ -1.89
SIX3O95343 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.26□□□□□ -1.89
SIX3O95343 AP000811.1-201ENST00000603803 651 ntBASIC3.26□□□□□ -1.89
SIX3O95343 AL139344.1-201ENST00000605228 195 ntBASIC3.26□□□□□ -1.89
SIX3O95343 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.26□□□□□ -1.89
SIX3O95343 AL031667.3-201ENST00000620124 655 ntBASIC3.26□□□□□ -1.89
SIX3O95343 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
SIX3O95343 ZNF826P-207ENST00000622273 1910 ntBASIC3.26□□□□□ -1.89
SIX3O95343 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SIX3O95343 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SIX3O95343 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SIX3O95343 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
SIX3O95343 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.25□□□□□ -1.89
SIX3O95343 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.25□□□□□ -1.89
SIX3O95343 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SIX3O95343 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.25□□□□□ -1.89
SIX3O95343 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SIX3O95343 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.25□□□□□ -1.89
SIX3O95343 RNU1-70P-201ENST00000362618 164 ntBASIC3.25□□□□□ -1.89
SIX3O95343 MTND4P13-201ENST00000402078 1023 ntBASIC3.25□□□□□ -1.89
SIX3O95343 RPS15AP6-201ENST00000420703 385 ntBASIC3.25□□□□□ -1.89
SIX3O95343 MTND1P20-201ENST00000430341 950 ntBASIC3.25□□□□□ -1.89
SIX3O95343 HSPD1P21-201ENST00000436541 245 ntBASIC3.25□□□□□ -1.89
SIX3O95343 AL008629.1-201ENST00000438615 184 ntBASIC3.25□□□□□ -1.89
SIX3O95343 ISCA1P2-201ENST00000438679 421 ntBASIC3.25□□□□□ -1.89
SIX3O95343 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.25□□□□□ -1.89
SIX3O95343 RPL21P23-201ENST00000446654 460 ntBASIC3.25□□□□□ -1.89
SIX3O95343 TPT1P14-201ENST00000448018 505 ntBASIC3.25□□□□□ -1.89
SIX3O95343 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC3.25□□□□□ -1.89
SIX3O95343 OR6C5P-201ENST00000452388 923 ntBASIC3.25□□□□□ -1.89
SIX3O95343 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.25□□□□□ -1.89
SIX3O95343 Y_RNA.638-201ENST00000459374 113 ntBASIC3.25□□□□□ -1.89
SIX3O95343 RN7SL330P-201ENST00000469709 307 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms