Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 AC004972.1-201ENST00000623934 2209 ntBASIC3.33□□□□□ -1.88
SSX4O60224 AC005832.2-201ENST00000538921 1430 ntBASIC3.33□□□□□ -1.88
SSX4O60224 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SSX4O60224 AC092326.2-201ENST00000624772 1561 ntBASIC3.33□□□□□ -1.88
SSX4O60224 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SSX4O60224 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.33□□□□□ -1.88
SSX4O60224 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.33□□□□□ -1.88
SSX4O60224 DDX10P1-201ENST00000448545 1933 ntBASIC3.32□□□□□ -1.88
SSX4O60224 ZNF826P-207ENST00000622273 1910 ntBASIC3.32□□□□□ -1.88
SSX4O60224 CEP170P1-201ENST00000502249 4587 ntBASIC3.32□□□□□ -1.88
SSX4O60224 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
SSX4O60224 AL672296.1-201ENST00000427780 2158 ntBASIC3.32□□□□□ -1.88
SSX4O60224 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
SSX4O60224 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SSX4O60224 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.32□□□□□ -1.88
SSX4O60224 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.32□□□□□ -1.88
SSX4O60224 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SSX4O60224 RNA5SP399-201ENST00000364003 117 ntBASIC3.32□□□□□ -1.88
SSX4O60224 RNU4-91P-201ENST00000364778 135 ntBASIC3.32□□□□□ -1.88
SSX4O60224 EI24P2-201ENST00000397776 1076 ntBASIC3.32□□□□□ -1.88
SSX4O60224 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.32□□□□□ -1.88
SSX4O60224 ST13P20-201ENST00000447996 1065 ntBASIC3.32□□□□□ -1.88
SSX4O60224 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.32□□□□□ -1.88
SSX4O60224 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC3.32□□□□□ -1.88
SSX4O60224 AC105914.1-201ENST00000511798 226 ntBASIC3.32□□□□□ -1.88
SSX4O60224 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.32□□□□□ -1.88
SSX4O60224 RN7SKP209-201ENST00000516888 304 ntBASIC3.32□□□□□ -1.88
SSX4O60224 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.32□□□□□ -1.88
SSX4O60224 AC007115.1-201ENST00000546853 234 ntBASIC3.32□□□□□ -1.88
SSX4O60224 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.32□□□□□ -1.88
SSX4O60224 SYF2P1-201ENST00000550658 413 ntBASIC3.32□□□□□ -1.88
SSX4O60224 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.32□□□□□ -1.88
SSX4O60224 AL157394.1-201ENST00000562983 1224 ntBASIC3.32□□□□□ -1.88
SSX4O60224 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC3.32□□□□□ -1.88
SSX4O60224 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.32□□□□□ -1.88
SSX4O60224 AL359999.1-201ENST00000604513 294 ntBASIC3.32□□□□□ -1.88
SSX4O60224 AC106900.2-201ENST00000604994 317 ntBASIC3.32□□□□□ -1.88
SSX4O60224 AC019176.2-201ENST00000611579 315 ntBASIC3.32□□□□□ -1.88
SSX4O60224 AC093838.1-201ENST00000613014 469 ntBASIC3.32□□□□□ -1.88
SSX4O60224 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.32□□□□□ -1.88
SSX4O60224 AL603839.4-201ENST00000624658 1005 ntBASIC3.32□□□□□ -1.88
SSX4O60224 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SSX4O60224 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SSX4O60224 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.32□□□□□ -1.88
SSX4O60224 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.32□□□□□ -1.88
SSX4O60224 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.31□□□□□ -1.88
SSX4O60224 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SSX4O60224 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SSX4O60224 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SSX4O60224 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SSX4O60224 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
SSX4O60224 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.31□□□□□ -1.88
SSX4O60224 AL513302.2-201ENST00000562313 1842 ntBASIC3.31□□□□□ -1.88
SSX4O60224 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SSX4O60224 AL390237.1-201ENST00000404226 1415 ntBASIC3.31□□□□□ -1.88
SSX4O60224 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SSX4O60224 MIR30E-201ENST00000362104 92 ntBASIC3.31□□□□□ -1.88
SSX4O60224 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.31□□□□□ -1.88
SSX4O60224 FCF1P10-201ENST00000407590 479 ntBASIC3.31□□□□□ -1.88
SSX4O60224 AC093578.1-201ENST00000415219 368 ntBASIC3.31□□□□□ -1.88
SSX4O60224 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.31□□□□□ -1.88
SSX4O60224 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.31□□□□□ -1.88
SSX4O60224 UBE2FP1-201ENST00000416536 447 ntBASIC3.31□□□□□ -1.88
SSX4O60224 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.31□□□□□ -1.88
SSX4O60224 AL139247.1-201ENST00000422768 325 ntBASIC3.31□□□□□ -1.88
SSX4O60224 AC091286.1-201ENST00000431233 461 ntBASIC3.31□□□□□ -1.88
SSX4O60224 BX679664.1-201ENST00000434429 253 ntBASIC3.31□□□□□ -1.88
SSX4O60224 SETP5-201ENST00000437270 562 ntBASIC3.31□□□□□ -1.88
SSX4O60224 RPL17P49-201ENST00000443728 411 ntBASIC3.31□□□□□ -1.88
SSX4O60224 RANP8-201ENST00000444720 713 ntBASIC3.31□□□□□ -1.88
SSX4O60224 AL162389.1-201ENST00000449233 177 ntBASIC3.31□□□□□ -1.88
SSX4O60224 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.31□□□□□ -1.88
SSX4O60224 SNRPFP4-201ENST00000456366 242 ntBASIC3.31□□□□□ -1.88
SSX4O60224 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.31□□□□□ -1.88
SSX4O60224 U3.44-201ENST00000458938 192 ntBASIC3.31□□□□□ -1.88
SSX4O60224 RNU7-59P-201ENST00000459101 61 ntBASIC3.31□□□□□ -1.88
SSX4O60224 AC010401.1-201ENST00000463867 348 ntBASIC3.31□□□□□ -1.88
SSX4O60224 AC084198.1-201ENST00000477747 402 ntBASIC3.31□□□□□ -1.88
SSX4O60224 RPS15AP36-201ENST00000492022 382 ntBASIC3.31□□□□□ -1.88
SSX4O60224 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SSX4O60224 AC114967.1-201ENST00000504890 259 ntBASIC3.31□□□□□ -1.88
SSX4O60224 AC010424.1-201ENST00000506336 297 ntBASIC3.31□□□□□ -1.88
SSX4O60224 RNU1-95P-201ENST00000516357 160 ntBASIC3.31□□□□□ -1.88
SSX4O60224 RNU1-128P-201ENST00000516704 160 ntBASIC3.31□□□□□ -1.88
SSX4O60224 DUXAP2-201ENST00000519198 589 ntBASIC3.31□□□□□ -1.88
SSX4O60224 SUMO2P20-201ENST00000520803 283 ntBASIC3.31□□□□□ -1.88
SSX4O60224 ERHP1-201ENST00000523006 310 ntBASIC3.31□□□□□ -1.88
SSX4O60224 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.31□□□□□ -1.88
SSX4O60224 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.31□□□□□ -1.88
SSX4O60224 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.31□□□□□ -1.88
SSX4O60224 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.31□□□□□ -1.88
SSX4O60224 AC037471.2-201ENST00000564941 598 ntBASIC3.31□□□□□ -1.88
SSX4O60224 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC3.31□□□□□ -1.88
SSX4O60224 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.31□□□□□ -1.88
SSX4O60224 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.31□□□□□ -1.88
SSX4O60224 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.31□□□□□ -1.88
SSX4O60224 AC105224.1-201ENST00000587055 421 ntBASIC3.31□□□□□ -1.88
SSX4O60224 AP001029.3-201ENST00000588063 596 ntBASIC3.31□□□□□ -1.88
SSX4O60224 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.31□□□□□ -1.88
SSX4O60224 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms