Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 BTF3P12-201ENST00000519620 469 ntBASIC1.99□□□□□ -2.09
SSNA1O43805 AC118942.1-201ENST00000529674 1035 ntBASIC1.99□□□□□ -2.09
SSNA1O43805 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC1.99□□□□□ -2.09
SSNA1O43805 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC1.99□□□□□ -2.09
SSNA1O43805 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC1.99□□□□□ -2.09
SSNA1O43805 VN1R85P-201ENST00000601587 426 ntBASIC1.99□□□□□ -2.09
SSNA1O43805 KATNBL1P5-201ENST00000605015 517 ntBASIC1.99□□□□□ -2.09
SSNA1O43805 AC067747.1-201ENST00000608026 250 ntBASIC1.99□□□□□ -2.09
SSNA1O43805 MIR6130-201ENST00000619419 109 ntBASIC1.99□□□□□ -2.09
SSNA1O43805 MIR203B-201ENST00000636080 86 ntBASIC1.99□□□□□ -2.09
SSNA1O43805 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC1.99□□□□□ -2.09
SSNA1O43805 DBF4P1-201ENST00000412976 1892 ntBASIC1.99□□□□□ -2.09
SSNA1O43805 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
SSNA1O43805 MTND4P27-201ENST00000450813 1354 ntBASIC1.98□□□□□ -2.09
SSNA1O43805 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
SSNA1O43805 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.98□□□□□ -2.09
SSNA1O43805 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
SSNA1O43805 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
SSNA1O43805 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
SSNA1O43805 FAM133CP-201ENST00000332869 704 ntBASIC1.98□□□□□ -2.09
SSNA1O43805 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.98□□□□□ -2.09
SSNA1O43805 SNORA16B-201ENST00000364674 135 ntBASIC1.98□□□□□ -2.09
SSNA1O43805 SNORA18.3-201ENST00000384122 132 ntBASIC1.98□□□□□ -2.09
SSNA1O43805 HMGB1P17-201ENST00000403495 628 ntBASIC1.98□□□□□ -2.09
SSNA1O43805 AL356131.1-201ENST00000405826 414 ntBASIC1.98□□□□□ -2.09
SSNA1O43805 HMGB3P2-201ENST00000411913 584 ntBASIC1.98□□□□□ -2.09
SSNA1O43805 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC1.98□□□□□ -2.09
SSNA1O43805 EEF1A1P41-201ENST00000414667 207 ntBASIC1.98□□□□□ -2.09
SSNA1O43805 AL109913.1-201ENST00000421173 514 ntBASIC1.98□□□□□ -2.09
SSNA1O43805 COTL1P1-201ENST00000422309 375 ntBASIC1.98□□□□□ -2.09
SSNA1O43805 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC1.98□□□□□ -2.09
SSNA1O43805 AC019178.2-201ENST00000423595 505 ntBASIC1.98□□□□□ -2.09
SSNA1O43805 AC091390.3-201ENST00000426478 338 ntBASIC1.98□□□□□ -2.09
SSNA1O43805 AC004975.1-201ENST00000428733 208 ntBASIC1.98□□□□□ -2.09
SSNA1O43805 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC1.98□□□□□ -2.09
SSNA1O43805 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.98□□□□□ -2.09
SSNA1O43805 AL159987.2-201ENST00000432754 307 ntBASIC1.98□□□□□ -2.09
SSNA1O43805 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC1.98□□□□□ -2.09
SSNA1O43805 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC1.98□□□□□ -2.09
SSNA1O43805 AL591503.2-201ENST00000442314 1005 ntBASIC1.98□□□□□ -2.09
SSNA1O43805 RPS24P13-201ENST00000442520 397 ntBASIC1.98□□□□□ -2.09
SSNA1O43805 VN1R10P-201ENST00000447106 875 ntBASIC1.98□□□□□ -2.09
SSNA1O43805 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.98□□□□□ -2.09
SSNA1O43805 RNU6-717P-201ENST00000459076 104 ntBASIC1.98□□□□□ -2.09
SSNA1O43805 KLF3P2-201ENST00000465138 268 ntBASIC1.98□□□□□ -2.09
SSNA1O43805 AC090515.1-201ENST00000465295 476 ntBASIC1.98□□□□□ -2.09
SSNA1O43805 DYNLL1P5-201ENST00000467158 270 ntBASIC1.98□□□□□ -2.09
SSNA1O43805 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
SSNA1O43805 AC105252.1-201ENST00000503089 286 ntBASIC1.98□□□□□ -2.09
SSNA1O43805 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC1.98□□□□□ -2.09
SSNA1O43805 AC091860.1-201ENST00000505723 432 ntBASIC1.98□□□□□ -2.09
SSNA1O43805 RNU5F-8P-201ENST00000515941 111 ntBASIC1.98□□□□□ -2.09
SSNA1O43805 SNORA76.2-201ENST00000517095 137 ntBASIC1.98□□□□□ -2.09
SSNA1O43805 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC1.98□□□□□ -2.09
SSNA1O43805 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.98□□□□□ -2.09
SSNA1O43805 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC1.98□□□□□ -2.09
SSNA1O43805 AC105137.2-201ENST00000569073 466 ntBASIC1.98□□□□□ -2.09
SSNA1O43805 AC040174.2-201ENST00000602701 465 ntBASIC1.98□□□□□ -2.09
SSNA1O43805 AL121917.1-203ENST00000605534 577 ntBASIC1.98□□□□□ -2.09
SSNA1O43805 AC091946.2-201ENST00000606105 291 ntBASIC1.98□□□□□ -2.09
SSNA1O43805 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC1.98□□□□□ -2.09
SSNA1O43805 AC080013.4-201ENST00000607624 649 ntBASIC1.98□□□□□ -2.09
SSNA1O43805 UBE2Q2P6-201ENST00000612666 153 ntBASIC1.98□□□□□ -2.09
SSNA1O43805 AC104307.1-201ENST00000616142 196 ntBASIC1.98□□□□□ -2.09
SSNA1O43805 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC1.98□□□□□ -2.09
SSNA1O43805 AP000553.5-201ENST00000641933 54 ntBASIC1.98□□□□□ -2.09
SSNA1O43805 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.98□□□□□ -2.09
SSNA1O43805 AC004944.1-201ENST00000517807 3059 ntBASIC1.98□□□□□ -2.09
SSNA1O43805 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC1.98□□□□□ -2.09
SSNA1O43805 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC1.98□□□□□ -2.09
SSNA1O43805 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC1.98□□□□□ -2.09
SSNA1O43805 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
SSNA1O43805 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC1.97□□□□□ -2.09
SSNA1O43805 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC1.97□□□□□ -2.09
SSNA1O43805 SNORA70.2-201ENST00000364506 135 ntBASIC1.97□□□□□ -2.09
SSNA1O43805 SNORA6-201ENST00000384033 151 ntBASIC1.97□□□□□ -2.09
SSNA1O43805 RNU6-217P-201ENST00000384164 104 ntBASIC1.97□□□□□ -2.09
SSNA1O43805 SNORA36C-201ENST00000384289 132 ntBASIC1.97□□□□□ -2.09
SSNA1O43805 AP002784.2-201ENST00000397300 549 ntBASIC1.97□□□□□ -2.09
SSNA1O43805 SNORD23.1-201ENST00000408212 104 ntBASIC1.97□□□□□ -2.09
SSNA1O43805 ERMN-204ENST00000409925 556 ntTSL 4 BASIC1.97□□□□□ -2.09
SSNA1O43805 RNU2-49P-201ENST00000410666 184 ntBASIC1.97□□□□□ -2.09
SSNA1O43805 TAF13P2-201ENST00000416876 286 ntBASIC1.97□□□□□ -2.09
SSNA1O43805 AL121882.1-201ENST00000422893 417 ntBASIC1.97□□□□□ -2.09
SSNA1O43805 ZFAND6P1-201ENST00000434138 605 ntBASIC1.97□□□□□ -2.09
SSNA1O43805 Z82210.1-201ENST00000440037 231 ntBASIC1.97□□□□□ -2.09
SSNA1O43805 AP1S2P1-201ENST00000457344 379 ntBASIC1.97□□□□□ -2.09
SSNA1O43805 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC1.97□□□□□ -2.09
SSNA1O43805 MRPS17P3-201ENST00000465453 385 ntBASIC1.97□□□□□ -2.09
SSNA1O43805 AC108734.3-201ENST00000481241 1165 ntBASIC1.97□□□□□ -2.09
SSNA1O43805 AC109486.1-201ENST00000486833 374 ntBASIC1.97□□□□□ -2.09
SSNA1O43805 SRI-210ENST00000490437 570 ntTSL 2 BASIC1.97□□□□□ -2.09
SSNA1O43805 RNA5SP364-201ENST00000516938 78 ntBASIC1.97□□□□□ -2.09
SSNA1O43805 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC1.97□□□□□ -2.09
SSNA1O43805 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC1.97□□□□□ -2.09
SSNA1O43805 HIGD1AP5-201ENST00000529959 259 ntBASIC1.97□□□□□ -2.09
SSNA1O43805 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC1.97□□□□□ -2.09
SSNA1O43805 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC1.97□□□□□ -2.09
SSNA1O43805 AC068313.1-201ENST00000604028 1008 ntBASIC1.97□□□□□ -2.09
SSNA1O43805 MTND4LP5-201ENST00000605152 292 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms