Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 AC022968.1-201ENST00000567372 442 ntBASIC4.99□□□□□ -1.61
SRGAP3O43295 AC021646.1-201ENST00000605469 484 ntBASIC4.99□□□□□ -1.61
SRGAP3O43295 AL008729.2-201ENST00000606393 473 ntBASIC4.99□□□□□ -1.61
SRGAP3O43295 AL355802.3-201ENST00000607571 545 ntBASIC4.99□□□□□ -1.61
SRGAP3O43295 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.99□□□□□ -1.61
SRGAP3O43295 AL773545.4-201ENST00000637262 310 ntBASIC4.99□□□□□ -1.61
SRGAP3O43295 AL513478.4-201ENST00000641636 310 ntBASIC4.99□□□□□ -1.61
SRGAP3O43295 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.99□□□□□ -1.61
SRGAP3O43295 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SRGAP3O43295 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
SRGAP3O43295 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SRGAP3O43295 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SRGAP3O43295 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
SRGAP3O43295 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.98□□□□□ -1.61
SRGAP3O43295 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
SRGAP3O43295 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
SRGAP3O43295 ZNF962P-201ENST00000443465 3140 ntBASIC4.98□□□□□ -1.61
SRGAP3O43295 Y_RNA.128-201ENST00000363391 112 ntBASIC4.98□□□□□ -1.61
SRGAP3O43295 RNA5SP399-201ENST00000364003 117 ntBASIC4.98□□□□□ -1.61
SRGAP3O43295 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
SRGAP3O43295 MIR559-201ENST00000385188 96 ntBASIC4.98□□□□□ -1.61
SRGAP3O43295 AL024474.1-201ENST00000404655 591 ntBASIC4.98□□□□□ -1.61
SRGAP3O43295 MIR1193-201ENST00000408109 78 ntBASIC4.98□□□□□ -1.61
SRGAP3O43295 RNA5SP104-201ENST00000410989 118 ntBASIC4.98□□□□□ -1.61
SRGAP3O43295 AC127526.1-201ENST00000417526 366 ntBASIC4.98□□□□□ -1.61
SRGAP3O43295 AL451054.2-201ENST00000420896 202 ntBASIC4.98□□□□□ -1.61
SRGAP3O43295 AC092832.1-201ENST00000422934 400 ntBASIC4.98□□□□□ -1.61
SRGAP3O43295 AC137499.1-201ENST00000427602 88 ntBASIC4.98□□□□□ -1.61
SRGAP3O43295 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC4.98□□□□□ -1.61
SRGAP3O43295 DDX3P2-201ENST00000446138 111 ntBASIC4.98□□□□□ -1.61
SRGAP3O43295 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.98□□□□□ -1.61
SRGAP3O43295 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC4.98□□□□□ -1.61
SRGAP3O43295 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.98□□□□□ -1.61
SRGAP3O43295 FGF7P3-201ENST00000454645 303 ntBASIC4.98□□□□□ -1.61
SRGAP3O43295 AL356010.1-201ENST00000456364 102 ntBASIC4.98□□□□□ -1.61
SRGAP3O43295 AP000893.1-201ENST00000474462 794 ntBASIC4.98□□□□□ -1.61
SRGAP3O43295 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.98□□□□□ -1.61
SRGAP3O43295 AC110792.1-201ENST00000491826 472 ntBASIC4.98□□□□□ -1.61
SRGAP3O43295 SRP72-202ENST00000504757 745 ntTSL 2 BASIC4.98□□□□□ -1.61
SRGAP3O43295 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.98□□□□□ -1.61
SRGAP3O43295 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.98□□□□□ -1.61
SRGAP3O43295 MIR3146-201ENST00000580367 79 ntBASIC4.98□□□□□ -1.61
SRGAP3O43295 AP001029.3-201ENST00000588063 596 ntBASIC4.98□□□□□ -1.61
SRGAP3O43295 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.98□□□□□ -1.61
SRGAP3O43295 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.98□□□□□ -1.61
SRGAP3O43295 AC009318.4-201ENST00000620496 486 ntBASIC4.98□□□□□ -1.61
SRGAP3O43295 AC079684.1-201ENST00000621405 437 ntBASIC4.98□□□□□ -1.61
SRGAP3O43295 MIR6500-201ENST00000622700 86 ntBASIC4.98□□□□□ -1.61
SRGAP3O43295 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SRGAP3O43295 ATM-228ENST00000639240 498 ntTSL 5 BASIC4.98□□□□□ -1.61
SRGAP3O43295 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
SRGAP3O43295 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
SRGAP3O43295 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SRGAP3O43295 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
SRGAP3O43295 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC4.98□□□□□ -1.61
SRGAP3O43295 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
SRGAP3O43295 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.97□□□□□ -1.61
SRGAP3O43295 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
SRGAP3O43295 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.97□□□□□ -1.61
SRGAP3O43295 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
SRGAP3O43295 MTND5P33-201ENST00000571250 1450 ntBASIC4.97□□□□□ -1.61
SRGAP3O43295 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SRGAP3O43295 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SRGAP3O43295 AC073343.1-201ENST00000328239 651 ntBASIC4.97□□□□□ -1.61
SRGAP3O43295 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.97□□□□□ -1.61
SRGAP3O43295 Y_RNA.144-201ENST00000363521 113 ntBASIC4.97□□□□□ -1.61
SRGAP3O43295 Y_RNA.231-201ENST00000364358 102 ntBASIC4.97□□□□□ -1.61
SRGAP3O43295 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC4.97□□□□□ -1.61
SRGAP3O43295 RNU6-43P-201ENST00000384302 107 ntBASIC4.97□□□□□ -1.61
SRGAP3O43295 RNU6-1207P-201ENST00000384343 107 ntBASIC4.97□□□□□ -1.61
SRGAP3O43295 RNU6-1160P-201ENST00000384546 104 ntBASIC4.97□□□□□ -1.61
SRGAP3O43295 MIR513A2-201ENST00000385249 127 ntBASIC4.97□□□□□ -1.61
SRGAP3O43295 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC4.97□□□□□ -1.61
SRGAP3O43295 RNU6-628P-201ENST00000410675 107 ntBASIC4.97□□□□□ -1.61
SRGAP3O43295 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.97□□□□□ -1.61
SRGAP3O43295 RPL31P45-201ENST00000419532 356 ntBASIC4.97□□□□□ -1.61
SRGAP3O43295 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SRGAP3O43295 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC4.97□□□□□ -1.61
SRGAP3O43295 AC073415.1-201ENST00000449240 153 ntBASIC4.97□□□□□ -1.61
SRGAP3O43295 MTND3P16-201ENST00000452205 344 ntBASIC4.97□□□□□ -1.61
SRGAP3O43295 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC4.97□□□□□ -1.61
SRGAP3O43295 AC025445.1-201ENST00000502728 300 ntBASIC4.97□□□□□ -1.61
SRGAP3O43295 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.97□□□□□ -1.61
SRGAP3O43295 AC021146.1-201ENST00000511202 716 ntBASIC4.97□□□□□ -1.61
SRGAP3O43295 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SRGAP3O43295 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.97□□□□□ -1.61
SRGAP3O43295 AC114797.1-201ENST00000514003 728 ntBASIC4.97□□□□□ -1.61
SRGAP3O43295 RNU4-29P-201ENST00000515943 174 ntBASIC4.97□□□□□ -1.61
SRGAP3O43295 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.97□□□□□ -1.61
SRGAP3O43295 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC4.97□□□□□ -1.61
SRGAP3O43295 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC4.97□□□□□ -1.61
SRGAP3O43295 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC4.97□□□□□ -1.61
SRGAP3O43295 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC4.97□□□□□ -1.61
SRGAP3O43295 AC091516.1-201ENST00000549191 703 ntBASIC4.97□□□□□ -1.61
SRGAP3O43295 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC4.97□□□□□ -1.61
SRGAP3O43295 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC4.97□□□□□ -1.61
SRGAP3O43295 AC053481.3-201ENST00000577881 843 ntBASIC4.97□□□□□ -1.61
SRGAP3O43295 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.97□□□□□ -1.61
SRGAP3O43295 AC006116.10-201ENST00000591836 581 ntBASIC4.97□□□□□ -1.61
SRGAP3O43295 AC068790.3-201ENST00000602988 553 ntBASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms