Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.06□□□□□ -1.76
PHGDHO43175 SNORA31-201ENST00000362607 130 ntBASIC4.06□□□□□ -1.76
PHGDHO43175 RNY4P14-201ENST00000363656 96 ntBASIC4.06□□□□□ -1.76
PHGDHO43175 SNORD35B-201ENST00000363660 87 ntBASIC4.06□□□□□ -1.76
PHGDHO43175 Y_RNA.256-201ENST00000364594 104 ntBASIC4.06□□□□□ -1.76
PHGDHO43175 RNU6-483P-201ENST00000384088 108 ntBASIC4.06□□□□□ -1.76
PHGDHO43175 SNORA36C-201ENST00000384289 132 ntBASIC4.06□□□□□ -1.76
PHGDHO43175 U3.22-201ENST00000391120 215 ntBASIC4.06□□□□□ -1.76
PHGDHO43175 AC011933.1-201ENST00000413334 321 ntBASIC4.06□□□□□ -1.76
PHGDHO43175 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PHGDHO43175 MRPL50P2-201ENST00000416821 482 ntBASIC4.06□□□□□ -1.76
PHGDHO43175 SDCBPP3-201ENST00000419629 891 ntBASIC4.06□□□□□ -1.76
PHGDHO43175 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.06□□□□□ -1.76
PHGDHO43175 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC4.06□□□□□ -1.76
PHGDHO43175 RPL7L1P10-201ENST00000427790 463 ntBASIC4.06□□□□□ -1.76
PHGDHO43175 AC093106.2-201ENST00000428212 385 ntBASIC4.06□□□□□ -1.76
PHGDHO43175 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC4.06□□□□□ -1.76
PHGDHO43175 DNAJC19P7-201ENST00000428811 344 ntBASIC4.06□□□□□ -1.76
PHGDHO43175 COX6B1P7-201ENST00000430845 235 ntBASIC4.06□□□□□ -1.76
PHGDHO43175 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC4.06□□□□□ -1.76
PHGDHO43175 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.06□□□□□ -1.76
PHGDHO43175 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC4.06□□□□□ -1.76
PHGDHO43175 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC4.06□□□□□ -1.76
PHGDHO43175 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.06□□□□□ -1.76
PHGDHO43175 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC4.06□□□□□ -1.76
PHGDHO43175 RPS29P33-201ENST00000456717 146 ntBASIC4.06□□□□□ -1.76
PHGDHO43175 snoU13.1-201ENST00000459157 104 ntBASIC4.06□□□□□ -1.76
PHGDHO43175 AC116533.1-201ENST00000459748 321 ntBASIC4.06□□□□□ -1.76
PHGDHO43175 AC011276.1-201ENST00000469688 323 ntBASIC4.06□□□□□ -1.76
PHGDHO43175 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.06□□□□□ -1.76
PHGDHO43175 AC006463.2-201ENST00000473326 348 ntBASIC4.06□□□□□ -1.76
PHGDHO43175 AC092451.1-201ENST00000480211 153 ntBASIC4.06□□□□□ -1.76
PHGDHO43175 AC116562.3-201ENST00000506136 177 ntBASIC4.06□□□□□ -1.76
PHGDHO43175 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PHGDHO43175 AC117522.1-201ENST00000509821 380 ntBASIC4.06□□□□□ -1.76
PHGDHO43175 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC4.06□□□□□ -1.76
PHGDHO43175 RNU6-1178P-201ENST00000516674 107 ntBASIC4.06□□□□□ -1.76
PHGDHO43175 AC068587.5-201ENST00000528506 175 ntBASIC4.06□□□□□ -1.76
PHGDHO43175 AC109635.3-201ENST00000529536 185 ntBASIC4.06□□□□□ -1.76
PHGDHO43175 AC104383.1-201ENST00000530297 370 ntBASIC4.06□□□□□ -1.76
PHGDHO43175 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.06□□□□□ -1.76
PHGDHO43175 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.06□□□□□ -1.76
PHGDHO43175 AC005951.2-201ENST00000576282 495 ntBASIC4.06□□□□□ -1.76
PHGDHO43175 AC012417.1-201ENST00000582307 1039 ntBASIC4.06□□□□□ -1.76
PHGDHO43175 AC006504.3-201ENST00000586818 523 ntBASIC4.06□□□□□ -1.76
PHGDHO43175 AC093788.1-201ENST00000609356 927 ntBASIC4.06□□□□□ -1.76
PHGDHO43175 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC4.06□□□□□ -1.76
PHGDHO43175 AL589994.2-201ENST00000621124 579 ntBASIC4.06□□□□□ -1.76
PHGDHO43175 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC4.06□□□□□ -1.76
PHGDHO43175 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.06□□□□□ -1.76
PHGDHO43175 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PHGDHO43175 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PHGDHO43175 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC4.06□□□□□ -1.76
PHGDHO43175 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.06□□□□□ -1.76
PHGDHO43175 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
PHGDHO43175 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.05□□□□□ -1.76
PHGDHO43175 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PHGDHO43175 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.05□□□□□ -1.76
PHGDHO43175 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
PHGDHO43175 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.05□□□□□ -1.76
PHGDHO43175 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
PHGDHO43175 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PHGDHO43175 DEFB108F-201ENST00000344638 222 ntBASIC4.05□□□□□ -1.76
PHGDHO43175 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PHGDHO43175 RNU6-960P-201ENST00000364056 120 ntBASIC4.05□□□□□ -1.76
PHGDHO43175 RNU6-1283P-201ENST00000365314 105 ntBASIC4.05□□□□□ -1.76
PHGDHO43175 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC4.05□□□□□ -1.76
PHGDHO43175 RNU6-701P-201ENST00000384059 107 ntBASIC4.05□□□□□ -1.76
PHGDHO43175 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
PHGDHO43175 NDUFS5P1-201ENST00000405668 289 ntBASIC4.05□□□□□ -1.76
PHGDHO43175 MIR1277-201ENST00000408536 78 ntBASIC4.05□□□□□ -1.76
PHGDHO43175 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC4.05□□□□□ -1.76
PHGDHO43175 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
PHGDHO43175 RPL26P29-201ENST00000415623 438 ntBASIC4.05□□□□□ -1.76
PHGDHO43175 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.05□□□□□ -1.76
PHGDHO43175 MTCO1P20-201ENST00000425366 358 ntBASIC4.05□□□□□ -1.76
PHGDHO43175 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.05□□□□□ -1.76
PHGDHO43175 AC011742.1-201ENST00000431448 434 ntBASIC4.05□□□□□ -1.76
PHGDHO43175 VDAC1P3-201ENST00000434069 851 ntBASIC4.05□□□□□ -1.76
PHGDHO43175 MTATP6P16-201ENST00000434543 526 ntBASIC4.05□□□□□ -1.76
PHGDHO43175 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC4.05□□□□□ -1.76
PHGDHO43175 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.05□□□□□ -1.76
PHGDHO43175 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC4.05□□□□□ -1.76
PHGDHO43175 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.05□□□□□ -1.76
PHGDHO43175 AC126389.1-201ENST00000477436 290 ntBASIC4.05□□□□□ -1.76
PHGDHO43175 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC4.05□□□□□ -1.76
PHGDHO43175 AL049874.1-201ENST00000489560 388 ntBASIC4.05□□□□□ -1.76
PHGDHO43175 AC106872.2-201ENST00000494303 480 ntBASIC4.05□□□□□ -1.76
PHGDHO43175 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC4.05□□□□□ -1.76
PHGDHO43175 RPS27AP13-201ENST00000498403 237 ntBASIC4.05□□□□□ -1.76
PHGDHO43175 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC4.05□□□□□ -1.76
PHGDHO43175 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC4.05□□□□□ -1.76
PHGDHO43175 RNU6-1281P-201ENST00000516223 105 ntBASIC4.05□□□□□ -1.76
PHGDHO43175 SNORA31.8-201ENST00000516327 108 ntBASIC4.05□□□□□ -1.76
PHGDHO43175 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC4.05□□□□□ -1.76
PHGDHO43175 AP001646.1-201ENST00000527936 915 ntBASIC4.05□□□□□ -1.76
PHGDHO43175 OR5D17P-201ENST00000531492 978 ntBASIC4.05□□□□□ -1.76
PHGDHO43175 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PHGDHO43175 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.05□□□□□ -1.76
PHGDHO43175 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms