Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 Y_RNA.436-201ENST00000384097 102 ntBASIC3.4□□□□□ -1.87
SMAD9O15198 AL109755.1-201ENST00000401791 649 ntBASIC3.4□□□□□ -1.87
SMAD9O15198 RN7SKP156-201ENST00000410308 342 ntBASIC3.4□□□□□ -1.87
SMAD9O15198 RPS3AP3-201ENST00000411933 242 ntBASIC3.4□□□□□ -1.87
SMAD9O15198 AC009237.5-201ENST00000414271 501 ntBASIC3.4□□□□□ -1.87
SMAD9O15198 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SMAD9O15198 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.4□□□□□ -1.87
SMAD9O15198 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.4□□□□□ -1.87
SMAD9O15198 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.4□□□□□ -1.87
SMAD9O15198 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.4□□□□□ -1.87
SMAD9O15198 AC018644.1-201ENST00000429934 551 ntBASIC3.4□□□□□ -1.87
SMAD9O15198 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC3.4□□□□□ -1.87
SMAD9O15198 TIMM9P1-201ENST00000436122 256 ntBASIC3.4□□□□□ -1.87
SMAD9O15198 AL353706.1-201ENST00000436728 494 ntBASIC3.4□□□□□ -1.87
SMAD9O15198 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC3.4□□□□□ -1.87
SMAD9O15198 AL022238.1-201ENST00000442557 355 ntBASIC3.4□□□□□ -1.87
SMAD9O15198 AL162389.1-201ENST00000449233 177 ntBASIC3.4□□□□□ -1.87
SMAD9O15198 AC108059.3-201ENST00000456388 214 ntBASIC3.4□□□□□ -1.87
SMAD9O15198 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.4□□□□□ -1.87
SMAD9O15198 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.4□□□□□ -1.87
SMAD9O15198 RPS23P3-201ENST00000470993 430 ntBASIC3.4□□□□□ -1.87
SMAD9O15198 RPS27AP1-201ENST00000475545 471 ntBASIC3.4□□□□□ -1.87
SMAD9O15198 MTND1P3-201ENST00000484956 952 ntBASIC3.4□□□□□ -1.87
SMAD9O15198 LARP1BP2-201ENST00000486594 519 ntBASIC3.4□□□□□ -1.87
SMAD9O15198 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.4□□□□□ -1.87
SMAD9O15198 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SMAD9O15198 ARL2BPP4-201ENST00000506854 471 ntBASIC3.4□□□□□ -1.87
SMAD9O15198 NDUFB4P2-201ENST00000509515 391 ntBASIC3.4□□□□□ -1.87
SMAD9O15198 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.4□□□□□ -1.87
SMAD9O15198 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.4□□□□□ -1.87
SMAD9O15198 RNA5SP208-201ENST00000516156 78 ntBASIC3.4□□□□□ -1.87
SMAD9O15198 RNA5SP164-201ENST00000516533 110 ntBASIC3.4□□□□□ -1.87
SMAD9O15198 SNORA31.22-201ENST00000517204 135 ntBASIC3.4□□□□□ -1.87
SMAD9O15198 RNU6-840P-201ENST00000517275 65 ntBASIC3.4□□□□□ -1.87
SMAD9O15198 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.4□□□□□ -1.87
SMAD9O15198 AP003122.4-201ENST00000530980 758 ntBASIC3.4□□□□□ -1.87
SMAD9O15198 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.4□□□□□ -1.87
SMAD9O15198 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.4□□□□□ -1.87
SMAD9O15198 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.4□□□□□ -1.87
SMAD9O15198 MIR4474-201ENST00000579189 78 ntBASIC3.4□□□□□ -1.87
SMAD9O15198 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC3.4□□□□□ -1.87
SMAD9O15198 CKS1BP3-201ENST00000600888 237 ntBASIC3.4□□□□□ -1.87
SMAD9O15198 KC877982.1-201ENST00000602313 470 ntBASIC3.4□□□□□ -1.87
SMAD9O15198 BX664608.1-201ENST00000610519 487 ntBASIC3.4□□□□□ -1.87
SMAD9O15198 AC245517.5-201ENST00000611529 162 ntBASIC3.4□□□□□ -1.87
SMAD9O15198 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SMAD9O15198 TUG1_2.1-201ENST00000614234 87 ntBASIC3.4□□□□□ -1.87
SMAD9O15198 AC008121.2-201ENST00000614647 523 ntBASIC3.4□□□□□ -1.87
SMAD9O15198 AC079684.1-201ENST00000621405 437 ntBASIC3.4□□□□□ -1.87
SMAD9O15198 AC244100.1-202ENST00000621554 382 ntBASIC3.4□□□□□ -1.87
SMAD9O15198 AC091953.2-201ENST00000623979 160 ntBASIC3.4□□□□□ -1.87
SMAD9O15198 MIR4275-201ENST00000636486 87 ntBASIC3.4□□□□□ -1.87
SMAD9O15198 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SMAD9O15198 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.4□□□□□ -1.87
SMAD9O15198 AP004289.2-201ENST00000444413 1457 ntBASIC3.4□□□□□ -1.87
SMAD9O15198 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.4□□□□□ -1.87
SMAD9O15198 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.4□□□□□ -1.87
SMAD9O15198 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
SMAD9O15198 AC093908.1-201ENST00000623125 8092 ntBASIC3.39□□□□□ -1.87
SMAD9O15198 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
SMAD9O15198 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SMAD9O15198 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.39□□□□□ -1.87
SMAD9O15198 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SMAD9O15198 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SMAD9O15198 RNU5A-1-201ENST00000362698 116 ntBASIC3.39□□□□□ -1.87
SMAD9O15198 RNA5SP387-201ENST00000364226 106 ntBASIC3.39□□□□□ -1.87
SMAD9O15198 Y_RNA.318-201ENST00000365131 97 ntBASIC3.39□□□□□ -1.87
SMAD9O15198 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
SMAD9O15198 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.39□□□□□ -1.87
SMAD9O15198 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.39□□□□□ -1.87
SMAD9O15198 AL591419.1-201ENST00000427423 339 ntBASIC3.39□□□□□ -1.87
SMAD9O15198 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.39□□□□□ -1.87
SMAD9O15198 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.39□□□□□ -1.87
SMAD9O15198 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.39□□□□□ -1.87
SMAD9O15198 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC3.39□□□□□ -1.87
SMAD9O15198 ATP5HP2-201ENST00000433885 485 ntBASIC3.39□□□□□ -1.87
SMAD9O15198 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.39□□□□□ -1.87
SMAD9O15198 HMGN2P20-201ENST00000437531 273 ntBASIC3.39□□□□□ -1.87
SMAD9O15198 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC3.39□□□□□ -1.87
SMAD9O15198 MTND6P13-201ENST00000443510 523 ntBASIC3.39□□□□□ -1.87
SMAD9O15198 ELOCP30-201ENST00000447108 299 ntBASIC3.39□□□□□ -1.87
SMAD9O15198 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.39□□□□□ -1.87
SMAD9O15198 AL133547.1-201ENST00000448546 220 ntBASIC3.39□□□□□ -1.87
SMAD9O15198 AL500522.2-201ENST00000448562 343 ntBASIC3.39□□□□□ -1.87
SMAD9O15198 MTCO2P18-201ENST00000457151 658 ntBASIC3.39□□□□□ -1.87
SMAD9O15198 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC3.39□□□□□ -1.87
SMAD9O15198 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SMAD9O15198 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.39□□□□□ -1.87
SMAD9O15198 AC109464.2-201ENST00000510242 943 ntBASIC3.39□□□□□ -1.87
SMAD9O15198 AC105914.1-201ENST00000511798 226 ntBASIC3.39□□□□□ -1.87
SMAD9O15198 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.39□□□□□ -1.87
SMAD9O15198 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.39□□□□□ -1.87
SMAD9O15198 AC107934.1-201ENST00000522215 217 ntBASIC3.39□□□□□ -1.87
SMAD9O15198 DEFB108A-201ENST00000530110 222 ntBASIC3.39□□□□□ -1.87
SMAD9O15198 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.39□□□□□ -1.87
SMAD9O15198 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC3.39□□□□□ -1.87
SMAD9O15198 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.39□□□□□ -1.87
SMAD9O15198 MIR3118-1-201ENST00000581787 76 ntBASIC3.39□□□□□ -1.87
SMAD9O15198 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.39□□□□□ -1.87
SMAD9O15198 AP001029.3-201ENST00000588063 596 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms