Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 RNU6-1102P-201ENST00000516149 96 ntBASIC2.11□□□□□ -2.07
UBFD1O14562 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.11□□□□□ -2.07
UBFD1O14562 IGKV3-31-201ENST00000523109 329 ntBASIC2.11□□□□□ -2.07
UBFD1O14562 AC121758.2-201ENST00000553271 193 ntBASIC2.11□□□□□ -2.07
UBFD1O14562 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.11□□□□□ -2.07
UBFD1O14562 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC2.11□□□□□ -2.07
UBFD1O14562 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.11□□□□□ -2.07
UBFD1O14562 RN7SL622P-201ENST00000585292 275 ntBASIC2.11□□□□□ -2.07
UBFD1O14562 AC079089.3-201ENST00000603094 673 ntBASIC2.11□□□□□ -2.07
UBFD1O14562 OR4H6P-202ENST00000603819 340 ntBASIC2.11□□□□□ -2.07
UBFD1O14562 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.11□□□□□ -2.07
UBFD1O14562 AL353748.2-201ENST00000622148 471 ntBASIC2.11□□□□□ -2.07
UBFD1O14562 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC2.11□□□□□ -2.07
UBFD1O14562 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.11□□□□□ -2.07
UBFD1O14562 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.11□□□□□ -2.07
UBFD1O14562 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
UBFD1O14562 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.11□□□□□ -2.07
UBFD1O14562 AP006437.1-201ENST00000641440 3685 ntBASIC2.11□□□□□ -2.07
UBFD1O14562 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.11□□□□□ -2.07
UBFD1O14562 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
UBFD1O14562 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
UBFD1O14562 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
UBFD1O14562 SNORD65C-201ENST00000390962 71 ntBASIC2.1□□□□□ -2.07
UBFD1O14562 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
UBFD1O14562 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
UBFD1O14562 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.1□□□□□ -2.07
UBFD1O14562 RNA5SP338-201ENST00000410495 85 ntBASIC2.1□□□□□ -2.07
UBFD1O14562 AC005005.2-201ENST00000420779 380 ntBASIC2.1□□□□□ -2.07
UBFD1O14562 BX276092.3-201ENST00000424182 230 ntBASIC2.1□□□□□ -2.07
UBFD1O14562 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
UBFD1O14562 RPL23AP7-203ENST00000449021 469 ntBASIC2.1□□□□□ -2.07
UBFD1O14562 snoU13.15-201ENST00000459407 104 ntBASIC2.1□□□□□ -2.07
UBFD1O14562 RPS20P22-201ENST00000473700 357 ntBASIC2.1□□□□□ -2.07
UBFD1O14562 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.1□□□□□ -2.07
UBFD1O14562 RNA5SP200-201ENST00000516360 103 ntBASIC2.1□□□□□ -2.07
UBFD1O14562 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.1□□□□□ -2.07
UBFD1O14562 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC2.1□□□□□ -2.07
UBFD1O14562 SUB1P1-201ENST00000524415 382 ntBASIC2.1□□□□□ -2.07
UBFD1O14562 OR4P1P-201ENST00000530808 1136 ntBASIC2.1□□□□□ -2.07
UBFD1O14562 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.1□□□□□ -2.07
UBFD1O14562 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.1□□□□□ -2.07
UBFD1O14562 NIFKP8-201ENST00000560500 874 ntBASIC2.1□□□□□ -2.07
UBFD1O14562 ISCA1P3-201ENST00000577104 373 ntBASIC2.1□□□□□ -2.07
UBFD1O14562 AC133794.1-201ENST00000602731 914 ntBASIC2.1□□□□□ -2.07
UBFD1O14562 NUTF2P8-201ENST00000604593 363 ntBASIC2.1□□□□□ -2.07
UBFD1O14562 VN1R9P-201ENST00000614184 867 ntBASIC2.1□□□□□ -2.07
UBFD1O14562 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC2.1□□□□□ -2.07
UBFD1O14562 AC106730.3-201ENST00000624568 641 ntBASIC2.1□□□□□ -2.07
UBFD1O14562 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC2.1□□□□□ -2.07
UBFD1O14562 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.1□□□□□ -2.07
UBFD1O14562 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.1□□□□□ -2.07
UBFD1O14562 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.1□□□□□ -2.07
UBFD1O14562 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.1□□□□□ -2.07
UBFD1O14562 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
UBFD1O14562 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
UBFD1O14562 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC2.1□□□□□ -2.07
UBFD1O14562 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
UBFD1O14562 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
UBFD1O14562 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.07
UBFD1O14562 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.09□□□□□ -2.07
UBFD1O14562 SNORD82-201ENST00000365530 70 ntBASIC2.09□□□□□ -2.07
UBFD1O14562 RNU1-73P-201ENST00000383971 164 ntBASIC2.09□□□□□ -2.07
UBFD1O14562 RNU6-481P-201ENST00000384194 107 ntBASIC2.09□□□□□ -2.07
UBFD1O14562 RNA5SP252-201ENST00000391131 119 ntBASIC2.09□□□□□ -2.07
UBFD1O14562 U3.29-201ENST00000391296 212 ntBASIC2.09□□□□□ -2.07
UBFD1O14562 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
UBFD1O14562 MOB4-205ENST00000409916 829 ntTSL 3 BASIC2.09□□□□□ -2.07
UBFD1O14562 RNU4-27P-201ENST00000410889 139 ntBASIC2.09□□□□□ -2.07
UBFD1O14562 AC007064.1-201ENST00000412238 351 ntBASIC2.09□□□□□ -2.07
UBFD1O14562 AL139415.2-201ENST00000431968 163 ntBASIC2.09□□□□□ -2.07
UBFD1O14562 MTCO3P43-201ENST00000440974 771 ntBASIC2.09□□□□□ -2.07
UBFD1O14562 AC004022.1-201ENST00000447766 1066 ntBASIC2.09□□□□□ -2.07
UBFD1O14562 NAP1L1P3-201ENST00000462291 880 ntBASIC2.09□□□□□ -2.07
UBFD1O14562 RPL23AP49-201ENST00000492925 468 ntBASIC2.09□□□□□ -2.07
UBFD1O14562 HMGB3P3-201ENST00000510526 400 ntBASIC2.09□□□□□ -2.07
UBFD1O14562 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.09□□□□□ -2.07
UBFD1O14562 AP000916.1-201ENST00000533869 835 ntBASIC2.09□□□□□ -2.07
UBFD1O14562 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.09□□□□□ -2.07
UBFD1O14562 FAM60BP-201ENST00000578364 658 ntBASIC2.09□□□□□ -2.07
UBFD1O14562 MIR4648-201ENST00000580107 72 ntBASIC2.09□□□□□ -2.07
UBFD1O14562 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC2.09□□□□□ -2.07
UBFD1O14562 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.09□□□□□ -2.07
UBFD1O14562 AL355812.1-201ENST00000603215 216 ntBASIC2.09□□□□□ -2.07
UBFD1O14562 AC009570.1-201ENST00000609599 745 ntBASIC2.09□□□□□ -2.07
UBFD1O14562 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
UBFD1O14562 AC003001.2-201ENST00000616294 831 ntBASIC2.09□□□□□ -2.07
UBFD1O14562 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.09□□□□□ -2.07
UBFD1O14562 AC132825.7-201ENST00000638744 335 ntBASIC2.09□□□□□ -2.07
UBFD1O14562 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
UBFD1O14562 AC099654.7-201ENST00000635788 2127 ntBASIC2.09□□□□□ -2.08
UBFD1O14562 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
UBFD1O14562 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.08□□□□□ -2.08
UBFD1O14562 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
UBFD1O14562 AC011460.1-201ENST00000636268 1834 ntBASIC2.08□□□□□ -2.08
UBFD1O14562 RNA5SP160-201ENST00000364866 120 ntBASIC2.08□□□□□ -2.08
UBFD1O14562 RNU6-253P-201ENST00000384730 105 ntBASIC2.08□□□□□ -2.08
UBFD1O14562 UBE2V1P15-201ENST00000407776 448 ntBASIC2.08□□□□□ -2.08
UBFD1O14562 AL357078.2-201ENST00000416486 427 ntBASIC2.08□□□□□ -2.08
UBFD1O14562 MTND1P23-201ENST00000416931 372 ntBASIC2.08□□□□□ -2.08
UBFD1O14562 MORF4L1P6-201ENST00000418771 268 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 179.4 ms