Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC4.12□□□□□ -1.75
TRIM38O00635 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC4.12□□□□□ -1.75
TRIM38O00635 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC4.12□□□□□ -1.75
TRIM38O00635 AC146944.2-203ENST00000502493 354 ntBASIC4.12□□□□□ -1.75
TRIM38O00635 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
TRIM38O00635 NPM1P41-201ENST00000512920 831 ntBASIC4.12□□□□□ -1.75
TRIM38O00635 AC139495.1-202ENST00000513164 354 ntBASIC4.12□□□□□ -1.75
TRIM38O00635 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.12□□□□□ -1.75
TRIM38O00635 AP002748.2-201ENST00000528671 348 ntBASIC4.12□□□□□ -1.75
TRIM38O00635 AC107016.1-201ENST00000550463 337 ntBASIC4.12□□□□□ -1.75
TRIM38O00635 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC4.12□□□□□ -1.75
TRIM38O00635 AL360157.1-201ENST00000565962 87 ntBASIC4.12□□□□□ -1.75
TRIM38O00635 MIR4444-1-201ENST00000581696 74 ntBASIC4.12□□□□□ -1.75
TRIM38O00635 MIR4444-2-201ENST00000584390 74 ntBASIC4.12□□□□□ -1.75
TRIM38O00635 DUXAP4-201ENST00000603046 613 ntBASIC4.12□□□□□ -1.75
TRIM38O00635 AC011468.4-201ENST00000603942 409 ntBASIC4.12□□□□□ -1.75
TRIM38O00635 SEPT7P9-203ENST00000604116 343 ntBASIC4.12□□□□□ -1.75
TRIM38O00635 AP000942.4-201ENST00000604811 241 ntBASIC4.12□□□□□ -1.75
TRIM38O00635 AC064801.1-201ENST00000612025 407 ntBASIC4.12□□□□□ -1.75
TRIM38O00635 AC093838.1-201ENST00000613014 469 ntBASIC4.12□□□□□ -1.75
TRIM38O00635 AC004825.2-201ENST00000616634 455 ntBASIC4.12□□□□□ -1.75
TRIM38O00635 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.12□□□□□ -1.75
TRIM38O00635 MIR7702-201ENST00000621931 59 ntBASIC4.12□□□□□ -1.75
TRIM38O00635 AC138649.3-201ENST00000622154 254 ntBASIC4.12□□□□□ -1.75
TRIM38O00635 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
TRIM38O00635 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.12□□□□□ -1.75
TRIM38O00635 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
TRIM38O00635 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC4.12□□□□□ -1.75
TRIM38O00635 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
TRIM38O00635 AL161912.2-201ENST00000565707 3007 ntBASIC4.11□□□□□ -1.75
TRIM38O00635 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
TRIM38O00635 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.11□□□□□ -1.75
TRIM38O00635 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.11□□□□□ -1.75
TRIM38O00635 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
TRIM38O00635 Y_RNA.9-201ENST00000362354 101 ntBASIC4.11□□□□□ -1.75
TRIM38O00635 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TRIM38O00635 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
TRIM38O00635 RNU5A-6P-201ENST00000384136 116 ntBASIC4.11□□□□□ -1.75
TRIM38O00635 MIR3074-201ENST00000384885 81 ntBASIC4.11□□□□□ -1.75
TRIM38O00635 MT-TD-201ENST00000387419 68 ntBASIC4.11□□□□□ -1.75
TRIM38O00635 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC4.11□□□□□ -1.75
TRIM38O00635 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC4.11□□□□□ -1.75
TRIM38O00635 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC4.11□□□□□ -1.75
TRIM38O00635 DUTP6-201ENST00000425573 462 ntBASIC4.11□□□□□ -1.75
TRIM38O00635 RPL35AP22-201ENST00000436855 335 ntBASIC4.11□□□□□ -1.75
TRIM38O00635 AL049734.2-201ENST00000441066 616 ntBASIC4.11□□□□□ -1.75
TRIM38O00635 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TRIM38O00635 MTND4P19-201ENST00000446659 478 ntBASIC4.11□□□□□ -1.75
TRIM38O00635 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.11□□□□□ -1.75
TRIM38O00635 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.11□□□□□ -1.75
TRIM38O00635 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC4.11□□□□□ -1.75
TRIM38O00635 AF213884.1-201ENST00000488102 463 ntBASIC4.11□□□□□ -1.75
TRIM38O00635 RPL7P24-201ENST00000493052 752 ntBASIC4.11□□□□□ -1.75
TRIM38O00635 HMGN1P12-201ENST00000499125 195 ntBASIC4.11□□□□□ -1.75
TRIM38O00635 AC091133.4-201ENST00000511142 308 ntBASIC4.11□□□□□ -1.75
TRIM38O00635 AC010342.1-201ENST00000514047 877 ntBASIC4.11□□□□□ -1.75
TRIM38O00635 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC4.11□□□□□ -1.75
TRIM38O00635 AC026801.2-201ENST00000515352 425 ntBASIC4.11□□□□□ -1.75
TRIM38O00635 RNU6-358P-201ENST00000516564 75 ntBASIC4.11□□□□□ -1.75
TRIM38O00635 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC4.11□□□□□ -1.75
TRIM38O00635 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC4.11□□□□□ -1.75
TRIM38O00635 AC135001.1-201ENST00000544546 283 ntBASIC4.11□□□□□ -1.75
TRIM38O00635 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC4.11□□□□□ -1.75
TRIM38O00635 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC4.11□□□□□ -1.75
TRIM38O00635 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC4.11□□□□□ -1.75
TRIM38O00635 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.11□□□□□ -1.75
TRIM38O00635 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC4.11□□□□□ -1.75
TRIM38O00635 AC006960.3-201ENST00000561845 705 ntBASIC4.11□□□□□ -1.75
TRIM38O00635 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.11□□□□□ -1.75
TRIM38O00635 AC068790.3-201ENST00000602988 553 ntBASIC4.11□□□□□ -1.75
TRIM38O00635 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.11□□□□□ -1.75
TRIM38O00635 AC091834.1-201ENST00000614543 472 ntBASIC4.11□□□□□ -1.75
TRIM38O00635 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC4.11□□□□□ -1.75
TRIM38O00635 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.11□□□□□ -1.75
TRIM38O00635 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC4.11□□□□□ -1.75
TRIM38O00635 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TRIM38O00635 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC4.1□□□□□ -1.75
TRIM38O00635 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.1□□□□□ -1.75
TRIM38O00635 TAB3P1-202ENST00000452645 1634 ntBASIC4.1□□□□□ -1.75
TRIM38O00635 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TRIM38O00635 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TRIM38O00635 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.1□□□□□ -1.75
TRIM38O00635 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
TRIM38O00635 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TRIM38O00635 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC4.1□□□□□ -1.75
TRIM38O00635 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
TRIM38O00635 Y_RNA.263-201ENST00000364659 114 ntBASIC4.1□□□□□ -1.75
TRIM38O00635 RNU6-297P-201ENST00000384636 107 ntBASIC4.1□□□□□ -1.75
TRIM38O00635 RPS20P15-201ENST00000412792 311 ntBASIC4.1□□□□□ -1.75
TRIM38O00635 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC4.1□□□□□ -1.75
TRIM38O00635 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.1□□□□□ -1.75
TRIM38O00635 BX890604.2-201ENST00000427883 474 ntBASIC4.1□□□□□ -1.75
TRIM38O00635 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC4.1□□□□□ -1.75
TRIM38O00635 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC4.1□□□□□ -1.75
TRIM38O00635 AL022238.1-201ENST00000442557 355 ntBASIC4.1□□□□□ -1.75
TRIM38O00635 PDSS1P2-201ENST00000449397 678 ntBASIC4.1□□□□□ -1.75
TRIM38O00635 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC4.1□□□□□ -1.75
TRIM38O00635 AC007967.1-201ENST00000455422 1159 ntBASIC4.1□□□□□ -1.75
TRIM38O00635 SNRPGP5-201ENST00000456003 220 ntBASIC4.1□□□□□ -1.75
TRIM38O00635 SNORD42A-201ENST00000459584 64 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms