Protein–RNA interactions for Protein: A8TX70

COL6A5, Collagen alpha-5(VI) chain, humanhuman

Predictions only

Length 2,615 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5A8TX70 MTND4LP22-201ENST00000508209 276 ntBASIC1.26□□□□□ -2.21
COL6A5A8TX70 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC1.26□□□□□ -2.21
COL6A5A8TX70 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
COL6A5A8TX70 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC1.26□□□□□ -2.21
COL6A5A8TX70 USP9YP27-201ENST00000418455 438 ntBASIC1.26□□□□□ -2.21
COL6A5A8TX70 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC1.26□□□□□ -2.21
COL6A5A8TX70 AC009961.3-201ENST00000449832 765 ntBASIC1.26□□□□□ -2.21
COL6A5A8TX70 PTGES3P5-201ENST00000455109 434 ntBASIC1.26□□□□□ -2.21
COL6A5A8TX70 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.26□□□□□ -2.21
COL6A5A8TX70 COX6CP14-201ENST00000469580 174 ntBASIC1.26□□□□□ -2.21
COL6A5A8TX70 AC090255.1-201ENST00000495779 349 ntBASIC1.26□□□□□ -2.21
COL6A5A8TX70 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC1.26□□□□□ -2.21
COL6A5A8TX70 MIR6788-201ENST00000618842 66 ntBASIC1.26□□□□□ -2.21
COL6A5A8TX70 ZNF720P1-201ENST00000562403 1939 ntBASIC1.26□□□□□ -2.21
COL6A5A8TX70 AC068700.1-201ENST00000565862 3754 ntBASIC1.25□□□□□ -2.21
COL6A5A8TX70 IL33-203ENST00000456383 2501 ntTSL 5 BASIC1.25□□□□□ -2.21
COL6A5A8TX70 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
COL6A5A8TX70 U8.9-201ENST00000365667 134 ntBASIC1.25□□□□□ -2.21
COL6A5A8TX70 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC1.25□□□□□ -2.21
COL6A5A8TX70 NEK4P1-201ENST00000433383 879 ntBASIC1.25□□□□□ -2.21
COL6A5A8TX70 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC1.25□□□□□ -2.21
COL6A5A8TX70 HMGB1P26-201ENST00000452520 628 ntBASIC1.25□□□□□ -2.21
COL6A5A8TX70 RNA5SP330-201ENST00000517096 96 ntBASIC1.25□□□□□ -2.21
COL6A5A8TX70 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC1.25□□□□□ -2.21
COL6A5A8TX70 ABI1P1-201ENST00000603375 1120 ntBASIC1.25□□□□□ -2.21
COL6A5A8TX70 AC012557.2-201ENST00000605919 418 ntBASIC1.25□□□□□ -2.21
COL6A5A8TX70 ZNF209P-201ENST00000593450 2304 ntBASIC1.25□□□□□ -2.21
COL6A5A8TX70 AC002546.1-201ENST00000588041 2504 ntBASIC1.25□□□□□ -2.21
COL6A5A8TX70 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.25□□□□□ -2.21
COL6A5A8TX70 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
COL6A5A8TX70 RNU6-1080P-201ENST00000383982 107 ntBASIC1.25□□□□□ -2.21
COL6A5A8TX70 RNU1-139P-201ENST00000391307 165 ntBASIC1.25□□□□□ -2.21
COL6A5A8TX70 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC1.25□□□□□ -2.21
COL6A5A8TX70 CALM1P1-201ENST00000442082 433 ntBASIC1.25□□□□□ -2.21
COL6A5A8TX70 AC005297.2-201ENST00000450430 606 ntBASIC1.25□□□□□ -2.21
COL6A5A8TX70 RPL9P9-202ENST00000466501 579 ntBASIC1.25□□□□□ -2.21
COL6A5A8TX70 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC1.25□□□□□ -2.21
COL6A5A8TX70 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
COL6A5A8TX70 SUMO2P6-201ENST00000505273 288 ntBASIC1.25□□□□□ -2.21
COL6A5A8TX70 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC1.25□□□□□ -2.21
COL6A5A8TX70 AC068446.3-201ENST00000555285 382 ntBASIC1.25□□□□□ -2.21
COL6A5A8TX70 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC1.25□□□□□ -2.21
COL6A5A8TX70 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.25□□□□□ -2.21
COL6A5A8TX70 AL121917.1-203ENST00000605534 577 ntBASIC1.25□□□□□ -2.21
COL6A5A8TX70 AP000254.1-201ENST00000609934 520 ntBASIC1.25□□□□□ -2.21
COL6A5A8TX70 C2orf27A-204ENST00000623058 969 ntBASIC1.25□□□□□ -2.21
COL6A5A8TX70 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC1.25□□□□□ -2.21
COL6A5A8TX70 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC1.25□□□□□ -2.21
COL6A5A8TX70 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
COL6A5A8TX70 AL513185.2-201ENST00000425543 193 ntBASIC1.24□□□□□ -2.21
COL6A5A8TX70 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.24□□□□□ -2.21
COL6A5A8TX70 AC129850.1-201ENST00000436203 508 ntBASIC1.24□□□□□ -2.21
COL6A5A8TX70 SNRPGP3-201ENST00000469405 227 ntBASIC1.24□□□□□ -2.21
COL6A5A8TX70 RNA5SP436-201ENST00000516020 115 ntBASIC1.24□□□□□ -2.21
COL6A5A8TX70 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.24□□□□□ -2.21
COL6A5A8TX70 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
COL6A5A8TX70 AC087241.2-201ENST00000535801 324 ntBASIC1.24□□□□□ -2.21
COL6A5A8TX70 AC103810.1-201ENST00000579873 453 ntBASIC1.24□□□□□ -2.21
COL6A5A8TX70 AC124283.4-201ENST00000581815 456 ntBASIC1.24□□□□□ -2.21
COL6A5A8TX70 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
COL6A5A8TX70 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC1.24□□□□□ -2.21
COL6A5A8TX70 AC068944.2-201ENST00000610373 403 ntBASIC1.24□□□□□ -2.21
COL6A5A8TX70 U3.15-201ENST00000365398 212 ntBASIC1.24□□□□□ -2.21
COL6A5A8TX70 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
COL6A5A8TX70 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC1.24□□□□□ -2.21
COL6A5A8TX70 AL645568.3-201ENST00000433683 316 ntBASIC1.24□□□□□ -2.21
COL6A5A8TX70 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
COL6A5A8TX70 MTND5P4-201ENST00000514978 288 ntBASIC1.24□□□□□ -2.21
COL6A5A8TX70 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC1.24□□□□□ -2.21
COL6A5A8TX70 AP003497.1-201ENST00000528472 562 ntBASIC1.24□□□□□ -2.21
COL6A5A8TX70 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.24□□□□□ -2.21
COL6A5A8TX70 AC105245.1-201ENST00000581934 244 ntBASIC1.24□□□□□ -2.21
COL6A5A8TX70 AC009902.3-201ENST00000606235 2172 ntBASIC1.24□□□□□ -2.21
COL6A5A8TX70 METTL21EP-201ENST00000298105 713 ntBASIC1.23□□□□□ -2.21
COL6A5A8TX70 RNU4-13P-201ENST00000364019 141 ntBASIC1.23□□□□□ -2.21
COL6A5A8TX70 RNU6-30P-201ENST00000384561 107 ntBASIC1.23□□□□□ -2.21
COL6A5A8TX70 SNORA67.6-201ENST00000391093 99 ntBASIC1.23□□□□□ -2.21
COL6A5A8TX70 MIR1323-201ENST00000408090 73 ntBASIC1.23□□□□□ -2.21
COL6A5A8TX70 snoU13.19-201ENST00000459148 104 ntBASIC1.23□□□□□ -2.21
COL6A5A8TX70 AC012181.1-201ENST00000479895 423 ntBASIC1.23□□□□□ -2.21
COL6A5A8TX70 SNORA31.26-201ENST00000517250 137 ntBASIC1.23□□□□□ -2.21
COL6A5A8TX70 NPM1P52-201ENST00000518264 846 ntBASIC1.23□□□□□ -2.21
COL6A5A8TX70 AC007687.1-201ENST00000602704 304 ntBASIC1.23□□□□□ -2.21
COL6A5A8TX70 VIS1.1-201ENST00000610517 203 ntBASIC1.23□□□□□ -2.21
COL6A5A8TX70 Clostridiales-1.2-201ENST00000636724 160 ntBASIC1.23□□□□□ -2.21
COL6A5A8TX70 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
COL6A5A8TX70 AL354695.1-201ENST00000427935 228 ntBASIC1.23□□□□□ -2.21
COL6A5A8TX70 AL365400.1-201ENST00000431854 640 ntBASIC1.23□□□□□ -2.21
COL6A5A8TX70 TPT1P14-201ENST00000448018 505 ntBASIC1.23□□□□□ -2.21
COL6A5A8TX70 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC1.23□□□□□ -2.21
COL6A5A8TX70 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC1.23□□□□□ -2.21
COL6A5A8TX70 RNA5SP402-201ENST00000517148 110 ntBASIC1.23□□□□□ -2.21
COL6A5A8TX70 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.23□□□□□ -2.21
COL6A5A8TX70 AL049779.4-201ENST00000604500 156 ntBASIC1.23□□□□□ -2.21
COL6A5A8TX70 AC097468.3-201ENST00000607956 456 ntBASIC1.23□□□□□ -2.21
COL6A5A8TX70 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC1.23□□□□□ -2.21
COL6A5A8TX70 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.23□□□□□ -2.21
COL6A5A8TX70 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC1.23□□□□□ -2.21
COL6A5A8TX70 MRPS36P1-201ENST00000421291 307 ntBASIC1.22□□□□□ -2.21
COL6A5A8TX70 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms