Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 AL161637.1-201ENST00000622380 412 ntBASIC4.24□□□□□ -1.73
CCDC78A2IDD5 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC78A2IDD5 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC78A2IDD5 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC78A2IDD5 RPS4XP5-202ENST00000449995 1334 ntBASIC4.23□□□□□ -1.73
CCDC78A2IDD5 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC78A2IDD5 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC78A2IDD5 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC78A2IDD5 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC78A2IDD5 RNU1-132P-201ENST00000364300 164 ntBASIC4.23□□□□□ -1.73
CCDC78A2IDD5 Y_RNA.255-201ENST00000364581 97 ntBASIC4.23□□□□□ -1.73
CCDC78A2IDD5 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC78A2IDD5 RNU6-74P-201ENST00000384235 107 ntBASIC4.23□□□□□ -1.73
CCDC78A2IDD5 Y_RNA.548-201ENST00000384656 105 ntBASIC4.23□□□□□ -1.73
CCDC78A2IDD5 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
CCDC78A2IDD5 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC4.23□□□□□ -1.73
CCDC78A2IDD5 NCOR1P3-201ENST00000420479 303 ntBASIC4.23□□□□□ -1.73
CCDC78A2IDD5 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC4.23□□□□□ -1.73
CCDC78A2IDD5 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.23□□□□□ -1.73
CCDC78A2IDD5 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC4.23□□□□□ -1.73
CCDC78A2IDD5 CBWD4P-201ENST00000445695 655 ntBASIC4.23□□□□□ -1.73
CCDC78A2IDD5 AL353691.1-201ENST00000451332 387 ntBASIC4.23□□□□□ -1.73
CCDC78A2IDD5 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC4.23□□□□□ -1.73
CCDC78A2IDD5 snoU109.4-201ENST00000458953 143 ntBASIC4.23□□□□□ -1.73
CCDC78A2IDD5 snoU13.3-201ENST00000459441 104 ntBASIC4.23□□□□□ -1.73
CCDC78A2IDD5 RPS4XP10-201ENST00000465034 731 ntBASIC4.23□□□□□ -1.73
CCDC78A2IDD5 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
CCDC78A2IDD5 RN7SL303P-201ENST00000469773 251 ntBASIC4.23□□□□□ -1.73
CCDC78A2IDD5 SNORD27.1-201ENST00000516319 72 ntBASIC4.23□□□□□ -1.73
CCDC78A2IDD5 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.23□□□□□ -1.73
CCDC78A2IDD5 RPL21P12-201ENST00000559810 515 ntBASIC4.23□□□□□ -1.73
CCDC78A2IDD5 AC044792.1-201ENST00000593294 196 ntBASIC4.23□□□□□ -1.73
CCDC78A2IDD5 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.23□□□□□ -1.73
CCDC78A2IDD5 ARF4P1-201ENST00000605447 541 ntBASIC4.23□□□□□ -1.73
CCDC78A2IDD5 TUG1_1.1-201ENST00000610654 145 ntBASIC4.23□□□□□ -1.73
CCDC78A2IDD5 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.23□□□□□ -1.73
CCDC78A2IDD5 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC78A2IDD5 AL159972.1-201ENST00000625150 448 ntBASIC4.23□□□□□ -1.73
CCDC78A2IDD5 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.23□□□□□ -1.73
CCDC78A2IDD5 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.23□□□□□ -1.73
CCDC78A2IDD5 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
CCDC78A2IDD5 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC78A2IDD5 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.23□□□□□ -1.73
CCDC78A2IDD5 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC78A2IDD5 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC78A2IDD5 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
CCDC78A2IDD5 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
CCDC78A2IDD5 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC78A2IDD5 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC78A2IDD5 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC78A2IDD5 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC78A2IDD5 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC78A2IDD5 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC78A2IDD5 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.22□□□□□ -1.73
CCDC78A2IDD5 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC78A2IDD5 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC78A2IDD5 U3.11-201ENST00000364476 212 ntBASIC4.22□□□□□ -1.73
CCDC78A2IDD5 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC78A2IDD5 SNORD51-201ENST00000384320 80 ntBASIC4.22□□□□□ -1.73
CCDC78A2IDD5 RNU6-837P-201ENST00000391056 108 ntBASIC4.22□□□□□ -1.73
CCDC78A2IDD5 MIR1193-201ENST00000408109 78 ntBASIC4.22□□□□□ -1.73
CCDC78A2IDD5 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC4.22□□□□□ -1.73
CCDC78A2IDD5 AC007390.1-201ENST00000415722 356 ntBASIC4.22□□□□□ -1.73
CCDC78A2IDD5 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.22□□□□□ -1.73
CCDC78A2IDD5 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.22□□□□□ -1.73
CCDC78A2IDD5 RBMY1KP-201ENST00000423480 476 ntBASIC4.22□□□□□ -1.73
CCDC78A2IDD5 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC4.22□□□□□ -1.73
CCDC78A2IDD5 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.22□□□□□ -1.73
CCDC78A2IDD5 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.22□□□□□ -1.73
CCDC78A2IDD5 RPL23AP89-201ENST00000439324 255 ntBASIC4.22□□□□□ -1.73
CCDC78A2IDD5 Z95327.1-201ENST00000446082 482 ntBASIC4.22□□□□□ -1.73
CCDC78A2IDD5 HMGN2P21-201ENST00000447764 270 ntBASIC4.22□□□□□ -1.73
CCDC78A2IDD5 NANOGP10-201ENST00000453325 895 ntBASIC4.22□□□□□ -1.73
CCDC78A2IDD5 RPL23AP81-201ENST00000455252 467 ntBASIC4.22□□□□□ -1.73
CCDC78A2IDD5 SNRPGP5-201ENST00000456003 220 ntBASIC4.22□□□□□ -1.73
CCDC78A2IDD5 HMGB3P30-201ENST00000457863 606 ntBASIC4.22□□□□□ -1.73
CCDC78A2IDD5 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.22□□□□□ -1.73
CCDC78A2IDD5 RN7SL691P-201ENST00000494487 301 ntBASIC4.22□□□□□ -1.73
CCDC78A2IDD5 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC4.22□□□□□ -1.73
CCDC78A2IDD5 AC025554.1-201ENST00000505641 188 ntBASIC4.22□□□□□ -1.73
CCDC78A2IDD5 AC020593.1-201ENST00000507399 299 ntBASIC4.22□□□□□ -1.73
CCDC78A2IDD5 PARP4P3-201ENST00000510265 317 ntBASIC4.22□□□□□ -1.73
CCDC78A2IDD5 AC008958.1-201ENST00000511047 682 ntBASIC4.22□□□□□ -1.73
CCDC78A2IDD5 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.22□□□□□ -1.73
CCDC78A2IDD5 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.22□□□□□ -1.73
CCDC78A2IDD5 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.22□□□□□ -1.73
CCDC78A2IDD5 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.22□□□□□ -1.73
CCDC78A2IDD5 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC4.22□□□□□ -1.73
CCDC78A2IDD5 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.22□□□□□ -1.73
CCDC78A2IDD5 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC4.22□□□□□ -1.73
CCDC78A2IDD5 AC022655.2-201ENST00000577280 318 ntBASIC4.22□□□□□ -1.73
CCDC78A2IDD5 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.22□□□□□ -1.73
CCDC78A2IDD5 COX6CP3-201ENST00000580869 223 ntBASIC4.22□□□□□ -1.73
CCDC78A2IDD5 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC4.22□□□□□ -1.73
CCDC78A2IDD5 SRP54-214ENST00000630962 162 ntTSL 5 BASIC4.22□□□□□ -1.73
CCDC78A2IDD5 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC78A2IDD5 FAM91A3P-201ENST00000456826 2544 ntBASIC4.22□□□□□ -1.73
CCDC78A2IDD5 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.22□□□□□ -1.73
CCDC78A2IDD5 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC78A2IDD5 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 135.8 ms