Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
SHISA3A0PJX4 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
SHISA3A0PJX4 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.48□□□□□ -1.69
SHISA3A0PJX4 AL450326.2-201ENST00000421913 1962 ntBASIC4.48□□□□□ -1.69
SHISA3A0PJX4 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SHISA3A0PJX4 RNA5SP52-201ENST00000362448 134 ntBASIC4.48□□□□□ -1.69
SHISA3A0PJX4 Y_RNA.210-201ENST00000364161 110 ntBASIC4.48□□□□□ -1.69
SHISA3A0PJX4 Y_RNA.276-201ENST00000364732 109 ntBASIC4.48□□□□□ -1.69
SHISA3A0PJX4 Y_RNA.314-201ENST00000365114 102 ntBASIC4.48□□□□□ -1.69
SHISA3A0PJX4 RNA5SP284-201ENST00000384547 118 ntBASIC4.48□□□□□ -1.69
SHISA3A0PJX4 Y_RNA.534-201ENST00000384599 112 ntBASIC4.48□□□□□ -1.69
SHISA3A0PJX4 AL138885.1-201ENST00000405921 675 ntBASIC4.48□□□□□ -1.69
SHISA3A0PJX4 RNU6-174P-201ENST00000410406 106 ntBASIC4.48□□□□□ -1.69
SHISA3A0PJX4 RN7SKP286-201ENST00000410894 299 ntBASIC4.48□□□□□ -1.69
SHISA3A0PJX4 RNU6-607P-201ENST00000411283 108 ntBASIC4.48□□□□□ -1.69
SHISA3A0PJX4 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC4.48□□□□□ -1.69
SHISA3A0PJX4 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.48□□□□□ -1.69
SHISA3A0PJX4 RPS15AP6-201ENST00000420703 385 ntBASIC4.48□□□□□ -1.69
SHISA3A0PJX4 HMGB1P9-201ENST00000429856 646 ntBASIC4.48□□□□□ -1.69
SHISA3A0PJX4 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.48□□□□□ -1.69
SHISA3A0PJX4 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.48□□□□□ -1.69
SHISA3A0PJX4 HSFY6P-201ENST00000445573 403 ntBASIC4.48□□□□□ -1.69
SHISA3A0PJX4 AC105399.1-202ENST00000447303 205 ntBASIC4.48□□□□□ -1.69
SHISA3A0PJX4 AL360271.2-201ENST00000447710 161 ntBASIC4.48□□□□□ -1.69
SHISA3A0PJX4 AP006222.1-205ENST00000450734 457 ntBASIC4.48□□□□□ -1.69
SHISA3A0PJX4 RPL23AP31-201ENST00000456160 467 ntBASIC4.48□□□□□ -1.69
SHISA3A0PJX4 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.48□□□□□ -1.69
SHISA3A0PJX4 AP000942.1-201ENST00000463969 747 ntBASIC4.48□□□□□ -1.69
SHISA3A0PJX4 AC018437.1-201ENST00000492214 406 ntBASIC4.48□□□□□ -1.69
SHISA3A0PJX4 AC093852.1-201ENST00000503587 266 ntBASIC4.48□□□□□ -1.69
SHISA3A0PJX4 AC114801.2-201ENST00000503825 781 ntBASIC4.48□□□□□ -1.69
SHISA3A0PJX4 GMPSP1-201ENST00000514075 579 ntBASIC4.48□□□□□ -1.69
SHISA3A0PJX4 RNA5SP249-201ENST00000516127 99 ntBASIC4.48□□□□□ -1.69
SHISA3A0PJX4 Y_RNA.715-201ENST00000517082 110 ntBASIC4.48□□□□□ -1.69
SHISA3A0PJX4 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.48□□□□□ -1.69
SHISA3A0PJX4 AC009643.1-201ENST00000532030 391 ntBASIC4.48□□□□□ -1.69
SHISA3A0PJX4 SNRPGP16-201ENST00000533275 226 ntBASIC4.48□□□□□ -1.69
SHISA3A0PJX4 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC4.48□□□□□ -1.69
SHISA3A0PJX4 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC4.48□□□□□ -1.69
SHISA3A0PJX4 AL390726.5-202ENST00000564800 256 ntBASIC4.48□□□□□ -1.69
SHISA3A0PJX4 CYCSP40-201ENST00000575927 294 ntBASIC4.48□□□□□ -1.69
SHISA3A0PJX4 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC4.48□□□□□ -1.69
SHISA3A0PJX4 AL160281.1-201ENST00000605307 311 ntBASIC4.48□□□□□ -1.69
SHISA3A0PJX4 SNORD91B-202ENST00000608459 222 ntBASIC4.48□□□□□ -1.69
SHISA3A0PJX4 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.48□□□□□ -1.69
SHISA3A0PJX4 MIR4272-201ENST00000635924 64 ntBASIC4.48□□□□□ -1.69
SHISA3A0PJX4 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SHISA3A0PJX4 AC008669.1-201ENST00000565823 2178 ntBASIC4.48□□□□□ -1.69
SHISA3A0PJX4 AL672167.1-203ENST00000641299 2975 ntBASIC4.48□□□□□ -1.69
SHISA3A0PJX4 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
SHISA3A0PJX4 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
SHISA3A0PJX4 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SHISA3A0PJX4 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
SHISA3A0PJX4 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SHISA3A0PJX4 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC4.47□□□□□ -1.69
SHISA3A0PJX4 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC4.47□□□□□ -1.69
SHISA3A0PJX4 AL138820.1-201ENST00000617901 5305 ntBASIC4.47□□□□□ -1.69
SHISA3A0PJX4 Y_RNA.288-201ENST00000364854 92 ntBASIC4.47□□□□□ -1.69
SHISA3A0PJX4 RNU6-1026P-201ENST00000384465 108 ntBASIC4.47□□□□□ -1.69
SHISA3A0PJX4 RNU4-70P-201ENST00000384579 139 ntBASIC4.47□□□□□ -1.69
SHISA3A0PJX4 Y_RNA.552-201ENST00000384665 112 ntBASIC4.47□□□□□ -1.69
SHISA3A0PJX4 SNORA17A-201ENST00000391185 133 ntBASIC4.47□□□□□ -1.69
SHISA3A0PJX4 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
SHISA3A0PJX4 AC108032.1-201ENST00000416706 207 ntBASIC4.47□□□□□ -1.69
SHISA3A0PJX4 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC4.47□□□□□ -1.69
SHISA3A0PJX4 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC4.47□□□□□ -1.69
SHISA3A0PJX4 CKS1BP5-201ENST00000434172 273 ntBASIC4.47□□□□□ -1.69
SHISA3A0PJX4 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.47□□□□□ -1.69
SHISA3A0PJX4 PCNPP5-201ENST00000452246 481 ntBASIC4.47□□□□□ -1.69
SHISA3A0PJX4 AC007998.1-201ENST00000474156 672 ntBASIC4.47□□□□□ -1.69
SHISA3A0PJX4 RPS15AP34-201ENST00000487776 387 ntBASIC4.47□□□□□ -1.69
SHISA3A0PJX4 RN7SL346P-201ENST00000491561 294 ntBASIC4.47□□□□□ -1.69
SHISA3A0PJX4 RN7SL591P-201ENST00000496150 292 ntBASIC4.47□□□□□ -1.69
SHISA3A0PJX4 AC107222.1-201ENST00000510899 637 ntBASIC4.47□□□□□ -1.69
SHISA3A0PJX4 RNU6-927P-201ENST00000516199 100 ntBASIC4.47□□□□□ -1.69
SHISA3A0PJX4 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC4.47□□□□□ -1.69
SHISA3A0PJX4 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC4.47□□□□□ -1.69
SHISA3A0PJX4 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.47□□□□□ -1.69
SHISA3A0PJX4 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.47□□□□□ -1.69
SHISA3A0PJX4 AC104576.1-201ENST00000524225 88 ntBASIC4.47□□□□□ -1.69
SHISA3A0PJX4 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.47□□□□□ -1.69
SHISA3A0PJX4 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.47□□□□□ -1.69
SHISA3A0PJX4 IGBP1P1-201ENST00000554337 1009 ntBASIC4.47□□□□□ -1.69
SHISA3A0PJX4 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC4.47□□□□□ -1.69
SHISA3A0PJX4 AL161616.1-201ENST00000611867 286 ntBASIC4.47□□□□□ -1.69
SHISA3A0PJX4 EIF3FP1-201ENST00000613970 806 ntBASIC4.47□□□□□ -1.69
SHISA3A0PJX4 AC034102.8-201ENST00000615146 484 ntBASIC4.47□□□□□ -1.69
SHISA3A0PJX4 AC132068.1-201ENST00000623805 459 ntBASIC4.47□□□□□ -1.69
SHISA3A0PJX4 SNORA17.5-201ENST00000630429 132 ntBASIC4.47□□□□□ -1.69
SHISA3A0PJX4 MIR4302-201ENST00000638058 60 ntBASIC4.47□□□□□ -1.69
SHISA3A0PJX4 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SHISA3A0PJX4 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SHISA3A0PJX4 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.47□□□□□ -1.69
SHISA3A0PJX4 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.47□□□□□ -1.69
SHISA3A0PJX4 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC4.47□□□□□ -1.69
SHISA3A0PJX4 MTND5P27-201ENST00000428871 1720 ntBASIC4.46□□□□□ -1.69
SHISA3A0PJX4 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.69
SHISA3A0PJX4 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.69
SHISA3A0PJX4 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.46□□□□□ -1.69
SHISA3A0PJX4 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 183.4 ms