Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC1.57□□□□□ -2.16
TCRBV3S1A0A5B6 RPAP2P1-201ENST00000603626 1168 ntBASIC1.57□□□□□ -2.16
TCRBV3S1A0A5B6 AP001330.4-201ENST00000604350 154 ntBASIC1.57□□□□□ -2.16
TCRBV3S1A0A5B6 AC106900.2-201ENST00000604994 317 ntBASIC1.57□□□□□ -2.16
TCRBV3S1A0A5B6 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC1.57□□□□□ -2.16
TCRBV3S1A0A5B6 SDR42E1P2-201ENST00000614861 481 ntBASIC1.57□□□□□ -2.16
TCRBV3S1A0A5B6 AL161629.2-201ENST00000615347 275 ntBASIC1.57□□□□□ -2.16
TCRBV3S1A0A5B6 SDR42E1P4-201ENST00000620894 481 ntBASIC1.57□□□□□ -2.16
TCRBV3S1A0A5B6 CR381572.1-201ENST00000625098 102 ntBASIC1.57□□□□□ -2.16
TCRBV3S1A0A5B6 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC1.57□□□□□ -2.16
TCRBV3S1A0A5B6 AC046144.1-201ENST00000478559 1853 ntBASIC1.56□□□□□ -2.16
TCRBV3S1A0A5B6 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC1.56□□□□□ -2.16
TCRBV3S1A0A5B6 Y_RNA.493-201ENST00000384422 102 ntBASIC1.56□□□□□ -2.16
TCRBV3S1A0A5B6 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
TCRBV3S1A0A5B6 AL135786.1-201ENST00000415892 214 ntBASIC1.56□□□□□ -2.16
TCRBV3S1A0A5B6 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC1.56□□□□□ -2.16
TCRBV3S1A0A5B6 AC009237.2-201ENST00000421358 284 ntBASIC1.56□□□□□ -2.16
TCRBV3S1A0A5B6 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC1.56□□□□□ -2.16
TCRBV3S1A0A5B6 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC1.56□□□□□ -2.16
TCRBV3S1A0A5B6 OR10R1P-201ENST00000441524 1141 ntBASIC1.56□□□□□ -2.16
TCRBV3S1A0A5B6 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.56□□□□□ -2.16
TCRBV3S1A0A5B6 ANKRD26P4-201ENST00000455755 950 ntBASIC1.56□□□□□ -2.16
TCRBV3S1A0A5B6 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC1.56□□□□□ -2.16
TCRBV3S1A0A5B6 RPL31P50-201ENST00000471002 296 ntBASIC1.56□□□□□ -2.16
TCRBV3S1A0A5B6 AC104687.1-201ENST00000485829 412 ntBASIC1.56□□□□□ -2.16
TCRBV3S1A0A5B6 RPL38P4-201ENST00000502376 214 ntBASIC1.56□□□□□ -2.16
TCRBV3S1A0A5B6 RNU7-193P-201ENST00000516723 65 ntBASIC1.56□□□□□ -2.16
TCRBV3S1A0A5B6 AC022634.1-201ENST00000520765 532 ntBASIC1.56□□□□□ -2.16
TCRBV3S1A0A5B6 SNRPGP16-201ENST00000533275 226 ntBASIC1.56□□□□□ -2.16
TCRBV3S1A0A5B6 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC1.56□□□□□ -2.16
TCRBV3S1A0A5B6 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.56□□□□□ -2.16
TCRBV3S1A0A5B6 MTCYBP28-201ENST00000566728 1132 ntBASIC1.56□□□□□ -2.16
TCRBV3S1A0A5B6 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC1.56□□□□□ -2.16
TCRBV3S1A0A5B6 AC068313.1-201ENST00000604028 1008 ntBASIC1.56□□□□□ -2.16
TCRBV3S1A0A5B6 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC1.56□□□□□ -2.16
TCRBV3S1A0A5B6 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC1.56□□□□□ -2.16
TCRBV3S1A0A5B6 BX649567.1-201ENST00000642071 1134 ntBASIC1.56□□□□□ -2.16
TCRBV3S1A0A5B6 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC1.56□□□□□ -2.16
TCRBV3S1A0A5B6 MTND4P8-201ENST00000514997 1362 ntBASIC1.56□□□□□ -2.16
TCRBV3S1A0A5B6 AL022578.1-201ENST00000439330 1433 ntBASIC1.56□□□□□ -2.16
TCRBV3S1A0A5B6 AL137003.2-201ENST00000606924 2538 ntBASIC1.56□□□□□ -2.16
TCRBV3S1A0A5B6 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC1.55□□□□□ -2.16
TCRBV3S1A0A5B6 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC1.55□□□□□ -2.16
TCRBV3S1A0A5B6 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.55□□□□□ -2.16
TCRBV3S1A0A5B6 RNU6-98P-201ENST00000384173 107 ntBASIC1.55□□□□□ -2.16
TCRBV3S1A0A5B6 RNA5SP80-201ENST00000410475 111 ntBASIC1.55□□□□□ -2.16
TCRBV3S1A0A5B6 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC1.55□□□□□ -2.16
TCRBV3S1A0A5B6 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC1.55□□□□□ -2.16
TCRBV3S1A0A5B6 AL365496.1-201ENST00000426885 215 ntBASIC1.55□□□□□ -2.16
TCRBV3S1A0A5B6 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC1.55□□□□□ -2.16
TCRBV3S1A0A5B6 TRAPPC13P1-201ENST00000435991 1062 ntBASIC1.55□□□□□ -2.16
TCRBV3S1A0A5B6 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC1.55□□□□□ -2.16
TCRBV3S1A0A5B6 AC004022.1-201ENST00000447766 1066 ntBASIC1.55□□□□□ -2.16
TCRBV3S1A0A5B6 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
TCRBV3S1A0A5B6 AC092155.2-201ENST00000454675 477 ntBASIC1.55□□□□□ -2.16
TCRBV3S1A0A5B6 NDUFAF4P3-201ENST00000456468 525 ntBASIC1.55□□□□□ -2.16
TCRBV3S1A0A5B6 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC1.55□□□□□ -2.16
TCRBV3S1A0A5B6 CABYRP1-201ENST00000465493 1045 ntBASIC1.55□□□□□ -2.16
TCRBV3S1A0A5B6 AC021087.2-201ENST00000504656 1203 ntBASIC1.55□□□□□ -2.16
TCRBV3S1A0A5B6 ANXA2P1-201ENST00000505539 926 ntBASIC1.55□□□□□ -2.16
TCRBV3S1A0A5B6 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC1.55□□□□□ -2.16
TCRBV3S1A0A5B6 RN7SKP96-201ENST00000516948 297 ntBASIC1.55□□□□□ -2.16
TCRBV3S1A0A5B6 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC1.55□□□□□ -2.16
TCRBV3S1A0A5B6 AC084851.1-201ENST00000529105 249 ntBASIC1.55□□□□□ -2.16
TCRBV3S1A0A5B6 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC1.55□□□□□ -2.16
TCRBV3S1A0A5B6 AP005205.1-201ENST00000563503 508 ntBASIC1.55□□□□□ -2.16
TCRBV3S1A0A5B6 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC1.55□□□□□ -2.16
TCRBV3S1A0A5B6 AL096840.1-201ENST00000603287 93 ntBASIC1.55□□□□□ -2.16
TCRBV3S1A0A5B6 AL354950.1-201ENST00000614150 568 ntBASIC1.55□□□□□ -2.16
TCRBV3S1A0A5B6 AP001486.3-201ENST00000615334 372 ntBASIC1.55□□□□□ -2.16
TCRBV3S1A0A5B6 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC1.55□□□□□ -2.16
TCRBV3S1A0A5B6 AC098679.5-201ENST00000624394 571 ntBASIC1.55□□□□□ -2.16
TCRBV3S1A0A5B6 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC1.55□□□□□ -2.16
TCRBV3S1A0A5B6 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.54□□□□□ -2.16
TCRBV3S1A0A5B6 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
TCRBV3S1A0A5B6 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
TCRBV3S1A0A5B6 SNORA68.1-201ENST00000364537 132 ntBASIC1.54□□□□□ -2.16
TCRBV3S1A0A5B6 RNA5SP88-201ENST00000365560 109 ntBASIC1.54□□□□□ -2.16
TCRBV3S1A0A5B6 MT-TC-201ENST00000387405 66 ntBASIC1.54□□□□□ -2.16
TCRBV3S1A0A5B6 RNU6-920P-201ENST00000410926 92 ntBASIC1.54□□□□□ -2.16
TCRBV3S1A0A5B6 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC1.54□□□□□ -2.16
TCRBV3S1A0A5B6 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC1.54□□□□□ -2.16
TCRBV3S1A0A5B6 YWHAZP8-201ENST00000436935 731 ntBASIC1.54□□□□□ -2.16
TCRBV3S1A0A5B6 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC1.54□□□□□ -2.16
TCRBV3S1A0A5B6 RPS26P30-201ENST00000443431 335 ntBASIC1.54□□□□□ -2.16
TCRBV3S1A0A5B6 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC1.54□□□□□ -2.16
TCRBV3S1A0A5B6 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC1.54□□□□□ -2.16
TCRBV3S1A0A5B6 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC1.54□□□□□ -2.16
TCRBV3S1A0A5B6 POLR2KP1-201ENST00000553226 168 ntBASIC1.54□□□□□ -2.16
TCRBV3S1A0A5B6 AL049870.4-201ENST00000555741 486 ntBASIC1.54□□□□□ -2.16
TCRBV3S1A0A5B6 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC1.54□□□□□ -2.16
TCRBV3S1A0A5B6 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC1.54□□□□□ -2.16
TCRBV3S1A0A5B6 AC010615.3-201ENST00000597319 394 ntBASIC1.54□□□□□ -2.16
TCRBV3S1A0A5B6 AC013444.2-201ENST00000603317 787 ntBASIC1.54□□□□□ -2.16
TCRBV3S1A0A5B6 HMGB1P51-201ENST00000605166 638 ntBASIC1.54□□□□□ -2.16
TCRBV3S1A0A5B6 AC135803.1-201ENST00000608748 565 ntBASIC1.54□□□□□ -2.16
TCRBV3S1A0A5B6 AC020658.4-201ENST00000613987 684 ntBASIC1.54□□□□□ -2.16
TCRBV3S1A0A5B6 AC025588.4-201ENST00000615802 908 ntBASIC1.54□□□□□ -2.16
TCRBV3S1A0A5B6 AL136981.2-201ENST00000617319 734 ntBASIC1.54□□□□□ -2.16
TCRBV3S1A0A5B6 AL590410.1-201ENST00000617925 333 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms