Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC2.86□□□□□ -1.95
SMIM28A0A1B0GU29 AC114981.1-201ENST00000503897 678 ntBASIC2.86□□□□□ -1.95
SMIM28A0A1B0GU29 AC118282.1-201ENST00000506408 765 ntBASIC2.86□□□□□ -1.95
SMIM28A0A1B0GU29 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC2.86□□□□□ -1.95
SMIM28A0A1B0GU29 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.86□□□□□ -1.95
SMIM28A0A1B0GU29 AC109445.1-201ENST00000512356 383 ntBASIC2.86□□□□□ -1.95
SMIM28A0A1B0GU29 RNU6-311P-201ENST00000516224 102 ntBASIC2.86□□□□□ -1.95
SMIM28A0A1B0GU29 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.86□□□□□ -1.95
SMIM28A0A1B0GU29 DEFB131D-201ENST00000526803 184 ntBASIC2.86□□□□□ -1.95
SMIM28A0A1B0GU29 AP000857.1-201ENST00000532151 543 ntBASIC2.86□□□□□ -1.95
SMIM28A0A1B0GU29 MTCO2P15-201ENST00000532655 656 ntBASIC2.86□□□□□ -1.95
SMIM28A0A1B0GU29 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
SMIM28A0A1B0GU29 MTND4P33-201ENST00000556706 766 ntBASIC2.86□□□□□ -1.95
SMIM28A0A1B0GU29 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC2.86□□□□□ -1.95
SMIM28A0A1B0GU29 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.86□□□□□ -1.95
SMIM28A0A1B0GU29 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
SMIM28A0A1B0GU29 AP001029.3-201ENST00000588063 596 ntBASIC2.86□□□□□ -1.95
SMIM28A0A1B0GU29 AL109653.1-201ENST00000603091 248 ntBASIC2.86□□□□□ -1.95
SMIM28A0A1B0GU29 AC107952.2-201ENST00000606048 486 ntBASIC2.86□□□□□ -1.95
SMIM28A0A1B0GU29 AP000484.1-201ENST00000620067 1252 ntBASIC2.86□□□□□ -1.95
SMIM28A0A1B0GU29 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC2.86□□□□□ -1.95
SMIM28A0A1B0GU29 AC092608.2-201ENST00000624427 218 ntBASIC2.86□□□□□ -1.95
SMIM28A0A1B0GU29 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC2.86□□□□□ -1.95
SMIM28A0A1B0GU29 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
SMIM28A0A1B0GU29 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.86□□□□□ -1.95
SMIM28A0A1B0GU29 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
SMIM28A0A1B0GU29 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.85□□□□□ -1.95
SMIM28A0A1B0GU29 RNA5SP68-201ENST00000363885 119 ntBASIC2.85□□□□□ -1.95
SMIM28A0A1B0GU29 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
SMIM28A0A1B0GU29 MTND4P13-201ENST00000402078 1023 ntBASIC2.85□□□□□ -1.95
SMIM28A0A1B0GU29 SNORA11.2-201ENST00000408318 127 ntBASIC2.85□□□□□ -1.95
SMIM28A0A1B0GU29 RNU2-47P-201ENST00000410649 186 ntBASIC2.85□□□□□ -1.95
SMIM28A0A1B0GU29 TPMTP2-201ENST00000414372 726 ntBASIC2.85□□□□□ -1.95
SMIM28A0A1B0GU29 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC2.85□□□□□ -1.95
SMIM28A0A1B0GU29 YPEL5P1-201ENST00000419731 367 ntBASIC2.85□□□□□ -1.95
SMIM28A0A1B0GU29 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.85□□□□□ -1.95
SMIM28A0A1B0GU29 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.85□□□□□ -1.95
SMIM28A0A1B0GU29 SUMO2P2-201ENST00000456482 255 ntBASIC2.85□□□□□ -1.95
SMIM28A0A1B0GU29 snoU13.4-201ENST00000458916 104 ntBASIC2.85□□□□□ -1.95
SMIM28A0A1B0GU29 AC097493.1-201ENST00000463958 372 ntBASIC2.85□□□□□ -1.95
SMIM28A0A1B0GU29 RPL21P8-201ENST00000465083 535 ntBASIC2.85□□□□□ -1.95
SMIM28A0A1B0GU29 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC2.85□□□□□ -1.95
SMIM28A0A1B0GU29 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC2.85□□□□□ -1.95
SMIM28A0A1B0GU29 AC114781.4-201ENST00000513707 639 ntBASIC2.85□□□□□ -1.95
SMIM28A0A1B0GU29 RNU6-1095P-201ENST00000516148 108 ntBASIC2.85□□□□□ -1.95
SMIM28A0A1B0GU29 HSPA8P13-201ENST00000523715 472 ntBASIC2.85□□□□□ -1.95
SMIM28A0A1B0GU29 AL133271.1-201ENST00000538229 291 ntBASIC2.85□□□□□ -1.95
SMIM28A0A1B0GU29 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.85□□□□□ -1.95
SMIM28A0A1B0GU29 SETP7-201ENST00000552169 453 ntBASIC2.85□□□□□ -1.95
SMIM28A0A1B0GU29 NBEAP1-201ENST00000554452 979 ntBASIC2.85□□□□□ -1.95
SMIM28A0A1B0GU29 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC2.85□□□□□ -1.95
SMIM28A0A1B0GU29 AL390208.1-201ENST00000605885 644 ntBASIC2.85□□□□□ -1.95
SMIM28A0A1B0GU29 AC006270.3-201ENST00000605967 1036 ntBASIC2.85□□□□□ -1.95
SMIM28A0A1B0GU29 AC245297.2-201ENST00000610119 565 ntBASIC2.85□□□□□ -1.95
SMIM28A0A1B0GU29 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
SMIM28A0A1B0GU29 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.85□□□□□ -1.95
SMIM28A0A1B0GU29 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.85□□□□□ -1.95
SMIM28A0A1B0GU29 MTND5P27-201ENST00000428871 1720 ntBASIC2.85□□□□□ -1.95
SMIM28A0A1B0GU29 OR4G11P-202ENST00000642116 1414 ntBASIC2.85□□□□□ -1.95
SMIM28A0A1B0GU29 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
SMIM28A0A1B0GU29 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
SMIM28A0A1B0GU29 AL672167.1-206ENST00000356293 943 ntBASIC2.84□□□□□ -1.95
SMIM28A0A1B0GU29 RNU6-1155P-201ENST00000363554 107 ntBASIC2.84□□□□□ -1.95
SMIM28A0A1B0GU29 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
SMIM28A0A1B0GU29 RNU6-1074P-201ENST00000383995 104 ntBASIC2.84□□□□□ -1.95
SMIM28A0A1B0GU29 MIR181B1-201ENST00000385240 110 ntBASIC2.84□□□□□ -1.95
SMIM28A0A1B0GU29 RNU6-952P-201ENST00000391164 108 ntBASIC2.84□□□□□ -1.95
SMIM28A0A1B0GU29 AL139039.1-201ENST00000401900 692 ntBASIC2.84□□□□□ -1.95
SMIM28A0A1B0GU29 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC2.84□□□□□ -1.95
SMIM28A0A1B0GU29 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
SMIM28A0A1B0GU29 SSXP9-201ENST00000417503 292 ntBASIC2.84□□□□□ -1.95
SMIM28A0A1B0GU29 TRAPPC2P4-201ENST00000421750 331 ntBASIC2.84□□□□□ -1.95
SMIM28A0A1B0GU29 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC2.84□□□□□ -1.95
SMIM28A0A1B0GU29 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC2.84□□□□□ -1.95
SMIM28A0A1B0GU29 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.84□□□□□ -1.95
SMIM28A0A1B0GU29 MTND3P1-201ENST00000441336 220 ntBASIC2.84□□□□□ -1.95
SMIM28A0A1B0GU29 EEF1E1P1-201ENST00000446998 430 ntBASIC2.84□□□□□ -1.95
SMIM28A0A1B0GU29 AL353691.1-201ENST00000451332 387 ntBASIC2.84□□□□□ -1.95
SMIM28A0A1B0GU29 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.84□□□□□ -1.95
SMIM28A0A1B0GU29 BX322784.1-201ENST00000455793 1077 ntBASIC2.84□□□□□ -1.95
SMIM28A0A1B0GU29 RPS3P1-201ENST00000456781 192 ntBASIC2.84□□□□□ -1.95
SMIM28A0A1B0GU29 ARPC3P2-201ENST00000457786 533 ntBASIC2.84□□□□□ -1.95
SMIM28A0A1B0GU29 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC2.84□□□□□ -1.95
SMIM28A0A1B0GU29 KC877373.1-201ENST00000479066 408 ntBASIC2.84□□□□□ -1.95
SMIM28A0A1B0GU29 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC2.84□□□□□ -1.95
SMIM28A0A1B0GU29 AC004062.1-201ENST00000509926 645 ntBASIC2.84□□□□□ -1.95
SMIM28A0A1B0GU29 AC010625.1-201ENST00000511296 403 ntBASIC2.84□□□□□ -1.95
SMIM28A0A1B0GU29 AC118465.1-201ENST00000513820 1271 ntBASIC2.84□□□□□ -1.95
SMIM28A0A1B0GU29 RNU6-150P-201ENST00000516237 95 ntBASIC2.84□□□□□ -1.95
SMIM28A0A1B0GU29 RNA5SP282-201ENST00000516355 108 ntBASIC2.84□□□□□ -1.95
SMIM28A0A1B0GU29 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.84□□□□□ -1.95
SMIM28A0A1B0GU29 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC2.84□□□□□ -1.95
SMIM28A0A1B0GU29 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
SMIM28A0A1B0GU29 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC2.84□□□□□ -1.95
SMIM28A0A1B0GU29 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.84□□□□□ -1.95
SMIM28A0A1B0GU29 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC2.84□□□□□ -1.95
SMIM28A0A1B0GU29 MIR4635-201ENST00000583759 79 ntBASIC2.84□□□□□ -1.95
SMIM28A0A1B0GU29 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.84□□□□□ -1.95
SMIM28A0A1B0GU29 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.84□□□□□ -1.95
SMIM28A0A1B0GU29 AL133507.1-201ENST00000605269 557 ntBASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms