Protein–RNA interactions for Protein: A0A0B4J248

TRAV1-1, T-cell receptor alpha variable 1-1 (Fragment), humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1A0A0B4J248 PSMD5-AS1-215ENST00000640622 205 ntBASIC1.69□□□□□ -2.14
TRAV1-1A0A0B4J248 AL109809.4-201ENST00000603520 2185 ntBASIC1.69□□□□□ -2.14
TRAV1-1A0A0B4J248 SDAD1P2-201ENST00000441308 2028 ntBASIC1.69□□□□□ -2.14
TRAV1-1A0A0B4J248 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC1.69□□□□□ -2.14
TRAV1-1A0A0B4J248 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC1.68□□□□□ -2.14
TRAV1-1A0A0B4J248 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC1.68□□□□□ -2.14
TRAV1-1A0A0B4J248 SNORA80A-201ENST00000363922 136 ntBASIC1.68□□□□□ -2.14
TRAV1-1A0A0B4J248 RNU6-619P-201ENST00000365146 108 ntBASIC1.68□□□□□ -2.14
TRAV1-1A0A0B4J248 RNU6-198P-201ENST00000384258 104 ntBASIC1.68□□□□□ -2.14
TRAV1-1A0A0B4J248 SNORD51-201ENST00000384320 80 ntBASIC1.68□□□□□ -2.14
TRAV1-1A0A0B4J248 AL122016.1-201ENST00000403365 367 ntBASIC1.68□□□□□ -2.14
TRAV1-1A0A0B4J248 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC1.68□□□□□ -2.14
TRAV1-1A0A0B4J248 AL023807.1-201ENST00000407932 359 ntBASIC1.68□□□□□ -2.14
TRAV1-1A0A0B4J248 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.68□□□□□ -2.14
TRAV1-1A0A0B4J248 RNA5SP184-201ENST00000411071 108 ntBASIC1.68□□□□□ -2.14
TRAV1-1A0A0B4J248 AC019097.1-201ENST00000424783 735 ntBASIC1.68□□□□□ -2.14
TRAV1-1A0A0B4J248 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC1.68□□□□□ -2.14
TRAV1-1A0A0B4J248 AC000041.1-201ENST00000439655 175 ntBASIC1.68□□□□□ -2.14
TRAV1-1A0A0B4J248 AL714022.1-201ENST00000439897 151 ntBASIC1.68□□□□□ -2.14
TRAV1-1A0A0B4J248 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC1.68□□□□□ -2.14
TRAV1-1A0A0B4J248 AL929288.2-201ENST00000446368 407 ntBASIC1.68□□□□□ -2.14
TRAV1-1A0A0B4J248 WASF1P1-201ENST00000447560 1131 ntBASIC1.68□□□□□ -2.14
TRAV1-1A0A0B4J248 AL589880.1-201ENST00000448271 287 ntBASIC1.68□□□□□ -2.14
TRAV1-1A0A0B4J248 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.68□□□□□ -2.14
TRAV1-1A0A0B4J248 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC1.68□□□□□ -2.14
TRAV1-1A0A0B4J248 AC233279.1-201ENST00000455300 423 ntBASIC1.68□□□□□ -2.14
TRAV1-1A0A0B4J248 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC1.68□□□□□ -2.14
TRAV1-1A0A0B4J248 MTCO3P2-201ENST00000457365 171 ntBASIC1.68□□□□□ -2.14
TRAV1-1A0A0B4J248 AC116337.2-201ENST00000477662 156 ntBASIC1.68□□□□□ -2.14
TRAV1-1A0A0B4J248 AL135752.1-201ENST00000479477 471 ntBASIC1.68□□□□□ -2.14
TRAV1-1A0A0B4J248 AC004924.1-201ENST00000480160 781 ntBASIC1.68□□□□□ -2.14
TRAV1-1A0A0B4J248 RPL23AP70-201ENST00000483361 460 ntBASIC1.68□□□□□ -2.14
TRAV1-1A0A0B4J248 SRI-210ENST00000490437 570 ntTSL 2 BASIC1.68□□□□□ -2.14
TRAV1-1A0A0B4J248 AC022493.1-201ENST00000492984 337 ntBASIC1.68□□□□□ -2.14
TRAV1-1A0A0B4J248 RPS27P26-201ENST00000494583 239 ntBASIC1.68□□□□□ -2.14
TRAV1-1A0A0B4J248 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.68□□□□□ -2.14
TRAV1-1A0A0B4J248 OR5BM1P-201ENST00000512021 366 ntBASIC1.68□□□□□ -2.14
TRAV1-1A0A0B4J248 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC1.68□□□□□ -2.14
TRAV1-1A0A0B4J248 RNA5SP471-201ENST00000516971 106 ntBASIC1.68□□□□□ -2.14
TRAV1-1A0A0B4J248 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC1.68□□□□□ -2.14
TRAV1-1A0A0B4J248 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC1.68□□□□□ -2.14
TRAV1-1A0A0B4J248 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC1.68□□□□□ -2.14
TRAV1-1A0A0B4J248 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC1.68□□□□□ -2.14
TRAV1-1A0A0B4J248 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC1.68□□□□□ -2.14
TRAV1-1A0A0B4J248 AC010546.1-201ENST00000569391 485 ntBASIC1.68□□□□□ -2.14
TRAV1-1A0A0B4J248 LRRC37A5P-203ENST00000580181 585 ntBASIC1.68□□□□□ -2.14
TRAV1-1A0A0B4J248 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC1.68□□□□□ -2.14
TRAV1-1A0A0B4J248 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC1.68□□□□□ -2.14
TRAV1-1A0A0B4J248 AL022099.1-201ENST00000604551 712 ntBASIC1.68□□□□□ -2.14
TRAV1-1A0A0B4J248 AL035413.2-201ENST00000604801 525 ntBASIC1.68□□□□□ -2.14
TRAV1-1A0A0B4J248 AC016911.1-201ENST00000613297 452 ntBASIC1.68□□□□□ -2.14
TRAV1-1A0A0B4J248 AL163051.2-201ENST00000618976 735 ntBASIC1.68□□□□□ -2.14
TRAV1-1A0A0B4J248 CU459211.1-201ENST00000635667 749 ntBASIC1.68□□□□□ -2.14
TRAV1-1A0A0B4J248 AC097714.1-201ENST00000511272 1647 ntBASIC1.68□□□□□ -2.14
TRAV1-1A0A0B4J248 AL359851.1-201ENST00000569460 4997 ntBASIC1.68□□□□□ -2.14
TRAV1-1A0A0B4J248 Z99496.1-201ENST00000469424 1477 ntBASIC1.68□□□□□ -2.14
TRAV1-1A0A0B4J248 RNU6-270P-201ENST00000364131 105 ntBASIC1.67□□□□□ -2.14
TRAV1-1A0A0B4J248 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
TRAV1-1A0A0B4J248 RNU6-1197P-201ENST00000391183 107 ntBASIC1.67□□□□□ -2.14
TRAV1-1A0A0B4J248 RPL17P12-201ENST00000413391 526 ntBASIC1.67□□□□□ -2.14
TRAV1-1A0A0B4J248 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.67□□□□□ -2.14
TRAV1-1A0A0B4J248 TRBV24OR9-2-201ENST00000416632 435 ntBASIC1.67□□□□□ -2.14
TRAV1-1A0A0B4J248 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC1.67□□□□□ -2.14
TRAV1-1A0A0B4J248 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC1.67□□□□□ -2.14
TRAV1-1A0A0B4J248 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC1.67□□□□□ -2.14
TRAV1-1A0A0B4J248 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC1.67□□□□□ -2.14
TRAV1-1A0A0B4J248 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC1.67□□□□□ -2.14
TRAV1-1A0A0B4J248 CBWD4P-201ENST00000445695 655 ntBASIC1.67□□□□□ -2.14
TRAV1-1A0A0B4J248 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC1.67□□□□□ -2.14
TRAV1-1A0A0B4J248 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC1.67□□□□□ -2.14
TRAV1-1A0A0B4J248 PNPLA4P1-201ENST00000458328 305 ntBASIC1.67□□□□□ -2.14
TRAV1-1A0A0B4J248 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC1.67□□□□□ -2.14
TRAV1-1A0A0B4J248 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC1.67□□□□□ -2.14
TRAV1-1A0A0B4J248 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC1.67□□□□□ -2.14
TRAV1-1A0A0B4J248 OR5AK1P-201ENST00000524837 922 ntBASIC1.67□□□□□ -2.14
TRAV1-1A0A0B4J248 OR5AQ1P-201ENST00000527596 927 ntBASIC1.67□□□□□ -2.14
TRAV1-1A0A0B4J248 NDUFS5P6-201ENST00000529136 295 ntBASIC1.67□□□□□ -2.14
TRAV1-1A0A0B4J248 AP002770.2-201ENST00000543613 532 ntBASIC1.67□□□□□ -2.14
TRAV1-1A0A0B4J248 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC1.67□□□□□ -2.14
TRAV1-1A0A0B4J248 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC1.67□□□□□ -2.14
TRAV1-1A0A0B4J248 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC1.67□□□□□ -2.14
TRAV1-1A0A0B4J248 NRBF2P5-201ENST00000603087 788 ntBASIC1.67□□□□□ -2.14
TRAV1-1A0A0B4J248 AC079089.3-201ENST00000603094 673 ntBASIC1.67□□□□□ -2.14
TRAV1-1A0A0B4J248 AP002826.1-201ENST00000608835 315 ntBASIC1.67□□□□□ -2.14
TRAV1-1A0A0B4J248 AP000254.1-201ENST00000609934 520 ntBASIC1.67□□□□□ -2.14
TRAV1-1A0A0B4J248 AL161629.2-201ENST00000615347 275 ntBASIC1.67□□□□□ -2.14
TRAV1-1A0A0B4J248 AL450472.3-201ENST00000615578 367 ntBASIC1.67□□□□□ -2.14
TRAV1-1A0A0B4J248 MIR6132-201ENST00000622083 109 ntBASIC1.67□□□□□ -2.14
TRAV1-1A0A0B4J248 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC1.67□□□□□ -2.14
TRAV1-1A0A0B4J248 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC1.67□□□□□ -2.14
TRAV1-1A0A0B4J248 AC009812.4-201ENST00000569134 1805 ntBASIC1.67□□□□□ -2.14
TRAV1-1A0A0B4J248 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
TRAV1-1A0A0B4J248 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC1.67□□□□□ -2.14
TRAV1-1A0A0B4J248 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.67□□□□□ -2.14
TRAV1-1A0A0B4J248 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
TRAV1-1A0A0B4J248 AC008568.2-201ENST00000623862 2313 ntBASIC1.67□□□□□ -2.14
TRAV1-1A0A0B4J248 CR848007.1-201ENST00000442354 1699 ntBASIC1.67□□□□□ -2.14
TRAV1-1A0A0B4J248 MFSD8-213ENST00000641134 1327 ntBASIC1.66□□□□□ -2.14
TRAV1-1A0A0B4J248 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
TRAV1-1A0A0B4J248 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms