Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
TRAV30A0A087WSZ9 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
TRAV30A0A087WSZ9 RNU6-1243P-201ENST00000364028 107 ntBASIC1.53□□□□□ -2.16
TRAV30A0A087WSZ9 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
TRAV30A0A087WSZ9 AGR3-202ENST00000402239 563 ntTSL 2 BASIC1.53□□□□□ -2.16
TRAV30A0A087WSZ9 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC1.53□□□□□ -2.16
TRAV30A0A087WSZ9 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.53□□□□□ -2.16
TRAV30A0A087WSZ9 AC096638.1-201ENST00000444678 216 ntBASIC1.53□□□□□ -2.16
TRAV30A0A087WSZ9 WASF1P1-201ENST00000447560 1131 ntBASIC1.53□□□□□ -2.16
TRAV30A0A087WSZ9 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC1.53□□□□□ -2.16
TRAV30A0A087WSZ9 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC1.53□□□□□ -2.16
TRAV30A0A087WSZ9 AC096751.1-202ENST00000502691 1067 ntBASIC1.53□□□□□ -2.16
TRAV30A0A087WSZ9 AC010486.1-201ENST00000511793 424 ntBASIC1.53□□□□□ -2.16
TRAV30A0A087WSZ9 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC1.53□□□□□ -2.16
TRAV30A0A087WSZ9 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC1.53□□□□□ -2.16
TRAV30A0A087WSZ9 HSPE1P18-201ENST00000517602 280 ntBASIC1.53□□□□□ -2.16
TRAV30A0A087WSZ9 AP002812.4-201ENST00000532139 286 ntBASIC1.53□□□□□ -2.16
TRAV30A0A087WSZ9 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC1.53□□□□□ -2.16
TRAV30A0A087WSZ9 AC007375.1-201ENST00000554513 578 ntBASIC1.53□□□□□ -2.16
TRAV30A0A087WSZ9 DEFB122-202ENST00000569013 197 ntBASIC1.53□□□□□ -2.16
TRAV30A0A087WSZ9 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC1.53□□□□□ -2.16
TRAV30A0A087WSZ9 AC025165.5-201ENST00000602802 578 ntBASIC1.53□□□□□ -2.16
TRAV30A0A087WSZ9 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC1.53□□□□□ -2.16
TRAV30A0A087WSZ9 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
TRAV30A0A087WSZ9 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC1.53□□□□□ -2.16
TRAV30A0A087WSZ9 AC244517.12-201ENST00000623581 663 ntBASIC1.53□□□□□ -2.16
TRAV30A0A087WSZ9 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC1.53□□□□□ -2.16
TRAV30A0A087WSZ9 AC103710.2-202ENST00000641454 2853 ntBASIC1.53□□□□□ -2.16
TRAV30A0A087WSZ9 ELF2P3-201ENST00000445099 1506 ntBASIC1.52□□□□□ -2.17
TRAV30A0A087WSZ9 RPS3AP24-201ENST00000407896 734 ntBASIC1.52□□□□□ -2.17
TRAV30A0A087WSZ9 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.52□□□□□ -2.17
TRAV30A0A087WSZ9 EIF1AXP1-201ENST00000419267 435 ntBASIC1.52□□□□□ -2.17
TRAV30A0A087WSZ9 PGBD4P6-201ENST00000421501 610 ntBASIC1.52□□□□□ -2.17
TRAV30A0A087WSZ9 EIF4EP4-201ENST00000424916 578 ntBASIC1.52□□□□□ -2.17
TRAV30A0A087WSZ9 AL445646.1-201ENST00000431784 216 ntBASIC1.52□□□□□ -2.17
TRAV30A0A087WSZ9 USP12PX-201ENST00000432383 1057 ntBASIC1.52□□□□□ -2.17
TRAV30A0A087WSZ9 IFNA20P-201ENST00000436840 528 ntBASIC1.52□□□□□ -2.17
TRAV30A0A087WSZ9 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.52□□□□□ -2.17
TRAV30A0A087WSZ9 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC1.52□□□□□ -2.17
TRAV30A0A087WSZ9 CDC42P1-201ENST00000456658 548 ntBASIC1.52□□□□□ -2.17
TRAV30A0A087WSZ9 MTCYBP14-201ENST00000457471 715 ntBASIC1.52□□□□□ -2.17
TRAV30A0A087WSZ9 PNPLA4P1-201ENST00000458328 305 ntBASIC1.52□□□□□ -2.17
TRAV30A0A087WSZ9 MLLT10P2-201ENST00000506434 249 ntBASIC1.52□□□□□ -2.17
TRAV30A0A087WSZ9 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.52□□□□□ -2.17
TRAV30A0A087WSZ9 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC1.52□□□□□ -2.17
TRAV30A0A087WSZ9 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC1.52□□□□□ -2.17
TRAV30A0A087WSZ9 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
TRAV30A0A087WSZ9 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC1.52□□□□□ -2.17
TRAV30A0A087WSZ9 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC1.52□□□□□ -2.17
TRAV30A0A087WSZ9 AC040174.2-201ENST00000602701 465 ntBASIC1.52□□□□□ -2.17
TRAV30A0A087WSZ9 AC135507.1-201ENST00000607214 561 ntBASIC1.52□□□□□ -2.17
TRAV30A0A087WSZ9 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC1.52□□□□□ -2.17
TRAV30A0A087WSZ9 AC020658.4-201ENST00000613987 684 ntBASIC1.52□□□□□ -2.17
TRAV30A0A087WSZ9 AL590099.1-201ENST00000615276 138 ntBASIC1.52□□□□□ -2.17
TRAV30A0A087WSZ9 OR1S1-201ENST00000624470 978 ntBASIC1.52□□□□□ -2.17
TRAV30A0A087WSZ9 ATP8A2P3-201ENST00000426792 1536 ntBASIC1.51□□□□□ -2.17
TRAV30A0A087WSZ9 ADAM3A-203ENST00000461344 2157 ntBASIC1.51□□□□□ -2.17
TRAV30A0A087WSZ9 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
TRAV30A0A087WSZ9 AC004520.1-201ENST00000608362 1413 ntBASIC1.51□□□□□ -2.17
TRAV30A0A087WSZ9 RNU4-82P-201ENST00000362443 140 ntBASIC1.51□□□□□ -2.17
TRAV30A0A087WSZ9 UBE2V1P2-201ENST00000397758 440 ntBASIC1.51□□□□□ -2.17
TRAV30A0A087WSZ9 AC019129.1-201ENST00000403786 261 ntBASIC1.51□□□□□ -2.17
TRAV30A0A087WSZ9 RN7SKP32-201ENST00000410167 303 ntBASIC1.51□□□□□ -2.17
TRAV30A0A087WSZ9 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC1.51□□□□□ -2.17
TRAV30A0A087WSZ9 AC098614.2-201ENST00000426040 255 ntBASIC1.51□□□□□ -2.17
TRAV30A0A087WSZ9 AC072039.1-201ENST00000477611 581 ntBASIC1.51□□□□□ -2.17
TRAV30A0A087WSZ9 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.51□□□□□ -2.17
TRAV30A0A087WSZ9 RPL9P6-201ENST00000492764 598 ntBASIC1.51□□□□□ -2.17
TRAV30A0A087WSZ9 OR52A4P-203ENST00000498233 1014 ntBASIC1.51□□□□□ -2.17
TRAV30A0A087WSZ9 MTCYBP17-201ENST00000503579 789 ntBASIC1.51□□□□□ -2.17
TRAV30A0A087WSZ9 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC1.51□□□□□ -2.17
TRAV30A0A087WSZ9 AC023141.11-201ENST00000508864 202 ntBASIC1.51□□□□□ -2.17
TRAV30A0A087WSZ9 RNU2-19P-201ENST00000517288 84 ntBASIC1.51□□□□□ -2.17
TRAV30A0A087WSZ9 AL512310.1-201ENST00000548639 172 ntBASIC1.51□□□□□ -2.17
TRAV30A0A087WSZ9 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC1.51□□□□□ -2.17
TRAV30A0A087WSZ9 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC1.51□□□□□ -2.17
TRAV30A0A087WSZ9 MIR5089-201ENST00000580047 84 ntBASIC1.51□□□□□ -2.17
TRAV30A0A087WSZ9 MIR4435-1-201ENST00000582552 80 ntBASIC1.51□□□□□ -2.17
TRAV30A0A087WSZ9 ZNF92P3-201ENST00000596594 954 ntBASIC1.51□□□□□ -2.17
TRAV30A0A087WSZ9 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC1.51□□□□□ -2.17
TRAV30A0A087WSZ9 AC103710.4-201ENST00000609301 899 ntBASIC1.51□□□□□ -2.17
TRAV30A0A087WSZ9 AC103710.1-201ENST00000610003 901 ntBASIC1.51□□□□□ -2.17
TRAV30A0A087WSZ9 Y_RNA.783-201ENST00000613546 102 ntBASIC1.51□□□□□ -2.17
TRAV30A0A087WSZ9 AL590808.1-201ENST00000618696 141 ntBASIC1.51□□□□□ -2.17
TRAV30A0A087WSZ9 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.51□□□□□ -2.17
TRAV30A0A087WSZ9 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC1.51□□□□□ -2.17
TRAV30A0A087WSZ9 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.51□□□□□ -2.17
TRAV30A0A087WSZ9 AC009487.4-201ENST00000624969 3585 ntBASIC1.51□□□□□ -2.17
TRAV30A0A087WSZ9 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
TRAV30A0A087WSZ9 RNU6-1249P-201ENST00000363237 111 ntBASIC1.5□□□□□ -2.17
TRAV30A0A087WSZ9 MIR634-201ENST00000385208 97 ntBASIC1.5□□□□□ -2.17
TRAV30A0A087WSZ9 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
TRAV30A0A087WSZ9 SLC9B1P2-201ENST00000398120 1184 ntBASIC1.5□□□□□ -2.17
TRAV30A0A087WSZ9 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC1.5□□□□□ -2.17
TRAV30A0A087WSZ9 RN7SKP192-201ENST00000411291 327 ntBASIC1.5□□□□□ -2.17
TRAV30A0A087WSZ9 RNA5SP508-201ENST00000411327 119 ntBASIC1.5□□□□□ -2.17
TRAV30A0A087WSZ9 RNA5SP270-201ENST00000411361 118 ntBASIC1.5□□□□□ -2.17
TRAV30A0A087WSZ9 AL139156.1-201ENST00000412785 841 ntBASIC1.5□□□□□ -2.17
TRAV30A0A087WSZ9 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC1.5□□□□□ -2.17
TRAV30A0A087WSZ9 FCF1P2-201ENST00000415284 583 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms