Protein–RNA interactions for Protein: Q9Y6N9

USH1C, Harmonin, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1CQ9Y6N9 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC2.38□□□□□ -2.03
USH1CQ9Y6N9 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC2.38□□□□□ -2.03
USH1CQ9Y6N9 MIR5694-201ENST00000581190 76 ntBASIC2.38□□□□□ -2.03
USH1CQ9Y6N9 ELOCP29-201ENST00000588193 334 ntBASIC2.38□□□□□ -2.03
USH1CQ9Y6N9 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.38□□□□□ -2.03
USH1CQ9Y6N9 AC002487.1-201ENST00000604565 994 ntBASIC2.38□□□□□ -2.03
USH1CQ9Y6N9 AC079791.1-201ENST00000605356 973 ntBASIC2.38□□□□□ -2.03
USH1CQ9Y6N9 AC067747.1-201ENST00000608026 250 ntBASIC2.38□□□□□ -2.03
USH1CQ9Y6N9 AL512506.2-201ENST00000624472 458 ntBASIC2.38□□□□□ -2.03
USH1CQ9Y6N9 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
USH1CQ9Y6N9 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.38□□□□□ -2.03
USH1CQ9Y6N9 ZNF519P1-201ENST00000449011 1626 ntBASIC2.38□□□□□ -2.03
USH1CQ9Y6N9 ZNF849P-201ENST00000594711 1566 ntBASIC2.37□□□□□ -2.03
USH1CQ9Y6N9 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
USH1CQ9Y6N9 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
USH1CQ9Y6N9 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
USH1CQ9Y6N9 SNORD114-30-201ENST00000364448 72 ntBASIC2.37□□□□□ -2.03
USH1CQ9Y6N9 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.37□□□□□ -2.03
USH1CQ9Y6N9 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
USH1CQ9Y6N9 RNU2-47P-201ENST00000410649 186 ntBASIC2.37□□□□□ -2.03
USH1CQ9Y6N9 TAF13P2-201ENST00000416876 286 ntBASIC2.37□□□□□ -2.03
USH1CQ9Y6N9 SFR1P2-201ENST00000421841 730 ntBASIC2.37□□□□□ -2.03
USH1CQ9Y6N9 AC241584.1-201ENST00000438469 1241 ntBASIC2.37□□□□□ -2.03
USH1CQ9Y6N9 AC009296.1-201ENST00000443146 155 ntBASIC2.37□□□□□ -2.03
USH1CQ9Y6N9 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC2.37□□□□□ -2.03
USH1CQ9Y6N9 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.37□□□□□ -2.03
USH1CQ9Y6N9 AC004924.1-201ENST00000480160 781 ntBASIC2.37□□□□□ -2.03
USH1CQ9Y6N9 RPL23AP70-201ENST00000483361 460 ntBASIC2.37□□□□□ -2.03
USH1CQ9Y6N9 NAA50-206ENST00000493454 964 ntTSL 2 BASIC2.37□□□□□ -2.03
USH1CQ9Y6N9 GTF2IP9-201ENST00000502460 301 ntBASIC2.37□□□□□ -2.03
USH1CQ9Y6N9 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC2.37□□□□□ -2.03
USH1CQ9Y6N9 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.37□□□□□ -2.03
USH1CQ9Y6N9 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.37□□□□□ -2.03
USH1CQ9Y6N9 AC087808.1-201ENST00000520501 361 ntBASIC2.37□□□□□ -2.03
USH1CQ9Y6N9 AP001317.1-201ENST00000531194 960 ntBASIC2.37□□□□□ -2.03
USH1CQ9Y6N9 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC2.37□□□□□ -2.03
USH1CQ9Y6N9 AC103810.1-201ENST00000579873 453 ntBASIC2.37□□□□□ -2.03
USH1CQ9Y6N9 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC2.37□□□□□ -2.03
USH1CQ9Y6N9 AC013444.2-201ENST00000603317 787 ntBASIC2.37□□□□□ -2.03
USH1CQ9Y6N9 AL035413.2-201ENST00000604801 525 ntBASIC2.37□□□□□ -2.03
USH1CQ9Y6N9 OR2AS2P-201ENST00000606902 342 ntBASIC2.37□□□□□ -2.03
USH1CQ9Y6N9 AC003001.2-201ENST00000616294 831 ntBASIC2.37□□□□□ -2.03
USH1CQ9Y6N9 U4.3-201ENST00000621047 82 ntBASIC2.37□□□□□ -2.03
USH1CQ9Y6N9 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.37□□□□□ -2.03
USH1CQ9Y6N9 AC008568.2-201ENST00000623862 2313 ntBASIC2.37□□□□□ -2.03
USH1CQ9Y6N9 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
USH1CQ9Y6N9 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.36□□□□□ -2.03
USH1CQ9Y6N9 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.36□□□□□ -2.03
USH1CQ9Y6N9 AC069528.2-201ENST00000624849 1991 ntBASIC2.36□□□□□ -2.03
USH1CQ9Y6N9 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
USH1CQ9Y6N9 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
USH1CQ9Y6N9 CKAP2P1-201ENST00000555477 2049 ntBASIC2.36□□□□□ -2.03
USH1CQ9Y6N9 RNU6-353P-201ENST00000364266 108 ntBASIC2.36□□□□□ -2.03
USH1CQ9Y6N9 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
USH1CQ9Y6N9 RNU6-198P-201ENST00000384258 104 ntBASIC2.36□□□□□ -2.03
USH1CQ9Y6N9 RNU6-301P-201ENST00000384277 107 ntBASIC2.36□□□□□ -2.03
USH1CQ9Y6N9 AP002784.2-201ENST00000397300 549 ntBASIC2.36□□□□□ -2.03
USH1CQ9Y6N9 NPM1P10-201ENST00000398310 865 ntBASIC2.36□□□□□ -2.03
USH1CQ9Y6N9 AL133264.1-201ENST00000407157 562 ntBASIC2.36□□□□□ -2.03
USH1CQ9Y6N9 AC096533.1-201ENST00000411645 353 ntBASIC2.36□□□□□ -2.03
USH1CQ9Y6N9 AL121882.1-201ENST00000422893 417 ntBASIC2.36□□□□□ -2.03
USH1CQ9Y6N9 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC2.36□□□□□ -2.03
USH1CQ9Y6N9 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC2.36□□□□□ -2.03
USH1CQ9Y6N9 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC2.36□□□□□ -2.03
USH1CQ9Y6N9 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC2.36□□□□□ -2.03
USH1CQ9Y6N9 AC092427.1-202ENST00000430569 476 ntBASIC2.36□□□□□ -2.03
USH1CQ9Y6N9 AC024082.2-201ENST00000434771 238 ntBASIC2.36□□□□□ -2.03
USH1CQ9Y6N9 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.36□□□□□ -2.03
USH1CQ9Y6N9 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.36□□□□□ -2.03
USH1CQ9Y6N9 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC2.36□□□□□ -2.03
USH1CQ9Y6N9 AL049714.1-201ENST00000466686 347 ntBASIC2.36□□□□□ -2.03
USH1CQ9Y6N9 HESX1-202ENST00000473921 757 ntTSL 5 BASIC2.36□□□□□ -2.03
USH1CQ9Y6N9 OR52A4P-202ENST00000481634 799 ntBASIC2.36□□□□□ -2.03
USH1CQ9Y6N9 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.36□□□□□ -2.03
USH1CQ9Y6N9 AC104435.1-201ENST00000483483 166 ntBASIC2.36□□□□□ -2.03
USH1CQ9Y6N9 RPS15AP34-201ENST00000487776 387 ntBASIC2.36□□□□□ -2.03
USH1CQ9Y6N9 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
USH1CQ9Y6N9 AL359273.1-201ENST00000510918 627 ntBASIC2.36□□□□□ -2.03
USH1CQ9Y6N9 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC2.36□□□□□ -2.03
USH1CQ9Y6N9 AP000889.2-201ENST00000532684 490 ntBASIC2.36□□□□□ -2.03
USH1CQ9Y6N9 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
USH1CQ9Y6N9 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
USH1CQ9Y6N9 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC2.36□□□□□ -2.03
USH1CQ9Y6N9 AL731537.2-201ENST00000561565 951 ntBASIC2.36□□□□□ -2.03
USH1CQ9Y6N9 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
USH1CQ9Y6N9 AC007998.5-201ENST00000622938 237 ntBASIC2.36□□□□□ -2.03
USH1CQ9Y6N9 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.36□□□□□ -2.03
USH1CQ9Y6N9 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
USH1CQ9Y6N9 AC009812.4-201ENST00000569134 1805 ntBASIC2.35□□□□□ -2.03
USH1CQ9Y6N9 DBF4P1-201ENST00000412976 1892 ntBASIC2.35□□□□□ -2.03
USH1CQ9Y6N9 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
USH1CQ9Y6N9 OR5J1P-201ENST00000313544 939 ntBASIC2.35□□□□□ -2.03
USH1CQ9Y6N9 DEFB108F-201ENST00000344638 222 ntBASIC2.35□□□□□ -2.03
USH1CQ9Y6N9 RNU6-839P-201ENST00000363347 108 ntBASIC2.35□□□□□ -2.03
USH1CQ9Y6N9 RNU6-657P-201ENST00000383904 107 ntBASIC2.35□□□□□ -2.03
USH1CQ9Y6N9 RNU6-878P-201ENST00000384578 110 ntBASIC2.35□□□□□ -2.03
USH1CQ9Y6N9 RNA5SP354-201ENST00000391247 136 ntBASIC2.35□□□□□ -2.03
USH1CQ9Y6N9 AL035405.1-201ENST00000400795 710 ntBASIC2.35□□□□□ -2.03
USH1CQ9Y6N9 AL357078.2-201ENST00000416486 427 ntBASIC2.35□□□□□ -2.03
USH1CQ9Y6N9 Z75741.2-201ENST00000417272 1167 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms