Protein–RNA interactions for Protein: Q9Y3E1

HDGFL3, Hepatoma-derived growth factor-related protein 3, humanhuman

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3Q9Y3E1 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC2.12□□□□□ -2.07
HDGFL3Q9Y3E1 AC092573.2-201ENST00000434546 243 ntBASIC2.12□□□□□ -2.07
HDGFL3Q9Y3E1 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.12□□□□□ -2.07
HDGFL3Q9Y3E1 RNF2P1-201ENST00000442955 1010 ntBASIC2.12□□□□□ -2.07
HDGFL3Q9Y3E1 RAC1P7-201ENST00000445367 377 ntBASIC2.12□□□□□ -2.07
HDGFL3Q9Y3E1 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC2.12□□□□□ -2.07
HDGFL3Q9Y3E1 GTF2IP12-201ENST00000456547 356 ntBASIC2.12□□□□□ -2.07
HDGFL3Q9Y3E1 AC092798.1-201ENST00000458542 409 ntBASIC2.12□□□□□ -2.07
HDGFL3Q9Y3E1 AC104164.3-201ENST00000467363 1258 ntBASIC2.12□□□□□ -2.07
HDGFL3Q9Y3E1 RPL31P60-201ENST00000478450 367 ntBASIC2.12□□□□□ -2.07
HDGFL3Q9Y3E1 OR52A4P-202ENST00000481634 799 ntBASIC2.12□□□□□ -2.07
HDGFL3Q9Y3E1 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.12□□□□□ -2.07
HDGFL3Q9Y3E1 RPS27P26-201ENST00000494583 239 ntBASIC2.12□□□□□ -2.07
HDGFL3Q9Y3E1 RPL30P5-201ENST00000494923 336 ntBASIC2.12□□□□□ -2.07
HDGFL3Q9Y3E1 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC2.12□□□□□ -2.07
HDGFL3Q9Y3E1 AC048346.1-201ENST00000510247 144 ntBASIC2.12□□□□□ -2.07
HDGFL3Q9Y3E1 XKRY-201ENST00000510392 1100 ntBASIC2.12□□□□□ -2.07
HDGFL3Q9Y3E1 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC2.12□□□□□ -2.07
HDGFL3Q9Y3E1 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC2.12□□□□□ -2.07
HDGFL3Q9Y3E1 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC2.12□□□□□ -2.07
HDGFL3Q9Y3E1 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.12□□□□□ -2.07
HDGFL3Q9Y3E1 RNU6-751P-201ENST00000516382 101 ntBASIC2.12□□□□□ -2.07
HDGFL3Q9Y3E1 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.12□□□□□ -2.07
HDGFL3Q9Y3E1 AP003467.2-201ENST00000520175 319 ntBASIC2.12□□□□□ -2.07
HDGFL3Q9Y3E1 DEFB108D-201ENST00000527787 222 ntBASIC2.12□□□□□ -2.07
HDGFL3Q9Y3E1 AP000916.1-201ENST00000533869 835 ntBASIC2.12□□□□□ -2.07
HDGFL3Q9Y3E1 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
HDGFL3Q9Y3E1 ACTR3BP3-201ENST00000565577 979 ntBASIC2.12□□□□□ -2.07
HDGFL3Q9Y3E1 AC010546.1-201ENST00000569391 485 ntBASIC2.12□□□□□ -2.07
HDGFL3Q9Y3E1 MIR5007-201ENST00000583098 95 ntBASIC2.12□□□□□ -2.07
HDGFL3Q9Y3E1 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC2.12□□□□□ -2.07
HDGFL3Q9Y3E1 AC040174.2-201ENST00000602701 465 ntBASIC2.12□□□□□ -2.07
HDGFL3Q9Y3E1 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC2.12□□□□□ -2.07
HDGFL3Q9Y3E1 KATNBL1P5-201ENST00000605015 517 ntBASIC2.12□□□□□ -2.07
HDGFL3Q9Y3E1 AC079791.1-201ENST00000605356 973 ntBASIC2.12□□□□□ -2.07
HDGFL3Q9Y3E1 AC097504.2-201ENST00000608088 454 ntBASIC2.12□□□□□ -2.07
HDGFL3Q9Y3E1 AC034102.8-201ENST00000615146 484 ntBASIC2.12□□□□□ -2.07
HDGFL3Q9Y3E1 AC104307.1-201ENST00000616142 196 ntBASIC2.12□□□□□ -2.07
HDGFL3Q9Y3E1 AC009159.1-201ENST00000618386 642 ntBASIC2.12□□□□□ -2.07
HDGFL3Q9Y3E1 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.12□□□□□ -2.07
HDGFL3Q9Y3E1 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
HDGFL3Q9Y3E1 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.12□□□□□ -2.07
HDGFL3Q9Y3E1 MTCO1P23-201ENST00000415223 1526 ntBASIC2.12□□□□□ -2.07
HDGFL3Q9Y3E1 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
HDGFL3Q9Y3E1 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.11□□□□□ -2.07
HDGFL3Q9Y3E1 MIR21-201ENST00000362134 72 ntBASIC2.11□□□□□ -2.07
HDGFL3Q9Y3E1 MIR23A-201ENST00000385245 73 ntBASIC2.11□□□□□ -2.07
HDGFL3Q9Y3E1 AC016769.3-201ENST00000396562 315 ntBASIC2.11□□□□□ -2.07
HDGFL3Q9Y3E1 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
HDGFL3Q9Y3E1 AC009963.1-201ENST00000417265 157 ntBASIC2.11□□□□□ -2.07
HDGFL3Q9Y3E1 AC008173.1-201ENST00000418901 264 ntBASIC2.11□□□□□ -2.07
HDGFL3Q9Y3E1 AC009414.1-201ENST00000427200 443 ntBASIC2.11□□□□□ -2.07
HDGFL3Q9Y3E1 MTATP6P11-201ENST00000428071 670 ntBASIC2.11□□□□□ -2.07
HDGFL3Q9Y3E1 ZFAND6P1-201ENST00000434138 605 ntBASIC2.11□□□□□ -2.07
HDGFL3Q9Y3E1 AL691517.1-201ENST00000440833 1235 ntBASIC2.11□□□□□ -2.07
HDGFL3Q9Y3E1 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
HDGFL3Q9Y3E1 AC025181.1-201ENST00000477507 416 ntBASIC2.11□□□□□ -2.07
HDGFL3Q9Y3E1 LINC00888-204ENST00000487386 421 ntBASIC2.11□□□□□ -2.07
HDGFL3Q9Y3E1 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
HDGFL3Q9Y3E1 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC2.11□□□□□ -2.07
HDGFL3Q9Y3E1 NAMPTP2-201ENST00000505629 1115 ntBASIC2.11□□□□□ -2.07
HDGFL3Q9Y3E1 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC2.11□□□□□ -2.07
HDGFL3Q9Y3E1 OR5BM1P-201ENST00000512021 366 ntBASIC2.11□□□□□ -2.07
HDGFL3Q9Y3E1 AC112673.1-201ENST00000513168 575 ntBASIC2.11□□□□□ -2.07
HDGFL3Q9Y3E1 AC119751.5-201ENST00000514077 770 ntBASIC2.11□□□□□ -2.07
HDGFL3Q9Y3E1 RNA5SP135-201ENST00000517019 125 ntBASIC2.11□□□□□ -2.07
HDGFL3Q9Y3E1 RNU1-104P-201ENST00000517280 175 ntBASIC2.11□□□□□ -2.07
HDGFL3Q9Y3E1 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC2.11□□□□□ -2.07
HDGFL3Q9Y3E1 SETP7-201ENST00000552169 453 ntBASIC2.11□□□□□ -2.07
HDGFL3Q9Y3E1 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC2.11□□□□□ -2.07
HDGFL3Q9Y3E1 AMZ2P1-203ENST00000565833 850 ntBASIC2.11□□□□□ -2.07
HDGFL3Q9Y3E1 ANKRD36BP2-206ENST00000575193 1245 ntBASIC2.11□□□□□ -2.07
HDGFL3Q9Y3E1 MIR3921-201ENST00000577308 85 ntBASIC2.11□□□□□ -2.07
HDGFL3Q9Y3E1 AC103810.1-201ENST00000579873 453 ntBASIC2.11□□□□□ -2.07
HDGFL3Q9Y3E1 AC090616.3-201ENST00000582184 217 ntBASIC2.11□□□□□ -2.07
HDGFL3Q9Y3E1 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC2.11□□□□□ -2.07
HDGFL3Q9Y3E1 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.11□□□□□ -2.07
HDGFL3Q9Y3E1 AC013444.2-201ENST00000603317 787 ntBASIC2.11□□□□□ -2.07
HDGFL3Q9Y3E1 AL645944.1-201ENST00000603857 493 ntBASIC2.11□□□□□ -2.07
HDGFL3Q9Y3E1 VN1R9P-201ENST00000614184 867 ntBASIC2.11□□□□□ -2.07
HDGFL3Q9Y3E1 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.11□□□□□ -2.07
HDGFL3Q9Y3E1 SDAD1P2-201ENST00000441308 2028 ntBASIC2.11□□□□□ -2.07
HDGFL3Q9Y3E1 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.11□□□□□ -2.07
HDGFL3Q9Y3E1 AL359693.1-201ENST00000614959 2407 ntBASIC2.1□□□□□ -2.07
HDGFL3Q9Y3E1 AC093536.2-201ENST00000565257 1406 ntBASIC2.1□□□□□ -2.07
HDGFL3Q9Y3E1 ANKRD36P1-201ENST00000344424 659 ntBASIC2.1□□□□□ -2.07
HDGFL3Q9Y3E1 RNU6-582P-201ENST00000362989 107 ntBASIC2.1□□□□□ -2.07
HDGFL3Q9Y3E1 RNU6-270P-201ENST00000364131 105 ntBASIC2.1□□□□□ -2.07
HDGFL3Q9Y3E1 SNORA67.4-201ENST00000384688 142 ntBASIC2.1□□□□□ -2.07
HDGFL3Q9Y3E1 MTCO2P31-201ENST00000402702 684 ntBASIC2.1□□□□□ -2.07
HDGFL3Q9Y3E1 AL355615.1-201ENST00000406187 641 ntBASIC2.1□□□□□ -2.07
HDGFL3Q9Y3E1 AL513475.1-201ENST00000406602 315 ntBASIC2.1□□□□□ -2.07
HDGFL3Q9Y3E1 RNU2-15P-201ENST00000410692 191 ntBASIC2.1□□□□□ -2.07
HDGFL3Q9Y3E1 RNU6-193P-201ENST00000410977 107 ntBASIC2.1□□□□□ -2.07
HDGFL3Q9Y3E1 AL445183.3-201ENST00000414168 502 ntBASIC2.1□□□□□ -2.07
HDGFL3Q9Y3E1 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
HDGFL3Q9Y3E1 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.1□□□□□ -2.07
HDGFL3Q9Y3E1 AC090774.1-201ENST00000435925 246 ntBASIC2.1□□□□□ -2.07
HDGFL3Q9Y3E1 AL714022.1-201ENST00000439897 151 ntBASIC2.1□□□□□ -2.07
HDGFL3Q9Y3E1 RFC5P1-201ENST00000454419 874 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms