Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 AC090740.1-201ENST00000623193 2262 ntBASIC2.9□□□□□ -1.94
RNF6Q9Y252 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
RNF6Q9Y252 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
RNF6Q9Y252 AL161781.1-201ENST00000354277 403 ntBASIC2.9□□□□□ -1.95
RNF6Q9Y252 RNU6-1207P-201ENST00000384343 107 ntBASIC2.9□□□□□ -1.95
RNF6Q9Y252 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
RNF6Q9Y252 AL138885.1-201ENST00000405921 675 ntBASIC2.9□□□□□ -1.95
RNF6Q9Y252 RPL27AP8-201ENST00000424277 446 ntBASIC2.9□□□□□ -1.95
RNF6Q9Y252 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.9□□□□□ -1.95
RNF6Q9Y252 COX7BP2-201ENST00000437976 242 ntBASIC2.9□□□□□ -1.95
RNF6Q9Y252 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.9□□□□□ -1.95
RNF6Q9Y252 MTND1P31-201ENST00000449206 961 ntBASIC2.9□□□□□ -1.95
RNF6Q9Y252 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC2.9□□□□□ -1.95
RNF6Q9Y252 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.9□□□□□ -1.95
RNF6Q9Y252 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
RNF6Q9Y252 AC022080.3-201ENST00000544433 482 ntBASIC2.9□□□□□ -1.95
RNF6Q9Y252 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC2.9□□□□□ -1.95
RNF6Q9Y252 AC090695.1-201ENST00000561269 1222 ntBASIC2.9□□□□□ -1.95
RNF6Q9Y252 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.9□□□□□ -1.95
RNF6Q9Y252 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.9□□□□□ -1.95
RNF6Q9Y252 AC022662.1-201ENST00000580252 331 ntBASIC2.9□□□□□ -1.95
RNF6Q9Y252 AC105224.1-201ENST00000587055 421 ntBASIC2.9□□□□□ -1.95
RNF6Q9Y252 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.9□□□□□ -1.95
RNF6Q9Y252 AL157817.1-201ENST00000614264 790 ntBASIC2.9□□□□□ -1.95
RNF6Q9Y252 AC138932.5-201ENST00000617759 563 ntBASIC2.9□□□□□ -1.95
RNF6Q9Y252 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
RNF6Q9Y252 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC2.9□□□□□ -1.95
RNF6Q9Y252 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.9□□□□□ -1.95
RNF6Q9Y252 AC005832.2-201ENST00000538921 1430 ntBASIC2.9□□□□□ -1.95
RNF6Q9Y252 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.9□□□□□ -1.95
RNF6Q9Y252 AC108206.1-201ENST00000570186 4159 ntBASIC2.9□□□□□ -1.95
RNF6Q9Y252 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.89□□□□□ -1.95
RNF6Q9Y252 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
RNF6Q9Y252 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
RNF6Q9Y252 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
RNF6Q9Y252 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
RNF6Q9Y252 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
RNF6Q9Y252 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.89□□□□□ -1.95
RNF6Q9Y252 Y_RNA.510-201ENST00000384511 114 ntBASIC2.89□□□□□ -1.95
RNF6Q9Y252 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
RNF6Q9Y252 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC2.89□□□□□ -1.95
RNF6Q9Y252 AL356421.1-201ENST00000403255 413 ntBASIC2.89□□□□□ -1.95
RNF6Q9Y252 RPL5P18-201ENST00000406671 891 ntBASIC2.89□□□□□ -1.95
RNF6Q9Y252 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC2.89□□□□□ -1.95
RNF6Q9Y252 HSPE1P1-201ENST00000421494 318 ntBASIC2.89□□□□□ -1.95
RNF6Q9Y252 USP9YP36-201ENST00000424581 829 ntBASIC2.89□□□□□ -1.95
RNF6Q9Y252 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.89□□□□□ -1.95
RNF6Q9Y252 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.89□□□□□ -1.95
RNF6Q9Y252 SNRPEP7-201ENST00000438350 220 ntBASIC2.89□□□□□ -1.95
RNF6Q9Y252 MTND3P1-201ENST00000441336 220 ntBASIC2.89□□□□□ -1.95
RNF6Q9Y252 FGF7P5-201ENST00000441829 291 ntBASIC2.89□□□□□ -1.95
RNF6Q9Y252 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC2.89□□□□□ -1.95
RNF6Q9Y252 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.89□□□□□ -1.95
RNF6Q9Y252 EEF1E1P1-201ENST00000446998 430 ntBASIC2.89□□□□□ -1.95
RNF6Q9Y252 AL590664.1-201ENST00000448065 339 ntBASIC2.89□□□□□ -1.95
RNF6Q9Y252 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.89□□□□□ -1.95
RNF6Q9Y252 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC2.89□□□□□ -1.95
RNF6Q9Y252 UBE2DNL-203ENST00000474922 222 ntBASIC2.89□□□□□ -1.95
RNF6Q9Y252 RPL7P18-201ENST00000478965 734 ntBASIC2.89□□□□□ -1.95
RNF6Q9Y252 AL049874.1-201ENST00000489560 388 ntBASIC2.89□□□□□ -1.95
RNF6Q9Y252 AC080014.1-201ENST00000496877 1201 ntBASIC2.89□□□□□ -1.95
RNF6Q9Y252 AC147055.4-201ENST00000504399 745 ntBASIC2.89□□□□□ -1.95
RNF6Q9Y252 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.89□□□□□ -1.95
RNF6Q9Y252 TPT1P8-201ENST00000510120 555 ntBASIC2.89□□□□□ -1.95
RNF6Q9Y252 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC2.89□□□□□ -1.95
RNF6Q9Y252 SNORA31.1-201ENST00000515993 133 ntBASIC2.89□□□□□ -1.95
RNF6Q9Y252 SNORA31.5-201ENST00000516190 133 ntBASIC2.89□□□□□ -1.95
RNF6Q9Y252 SNORD59.2-201ENST00000516873 68 ntBASIC2.89□□□□□ -1.95
RNF6Q9Y252 SCARNA1-201ENST00000517138 166 ntBASIC2.89□□□□□ -1.95
RNF6Q9Y252 COX6CP8-201ENST00000522620 226 ntBASIC2.89□□□□□ -1.95
RNF6Q9Y252 MTND1P8-201ENST00000571424 950 ntBASIC2.89□□□□□ -1.95
RNF6Q9Y252 AC011260.1-201ENST00000578420 472 ntBASIC2.89□□□□□ -1.95
RNF6Q9Y252 MIR4513-201ENST00000581077 86 ntBASIC2.89□□□□□ -1.95
RNF6Q9Y252 AC006539.2-201ENST00000601729 572 ntBASIC2.89□□□□□ -1.95
RNF6Q9Y252 AL158042.1-201ENST00000605338 460 ntBASIC2.89□□□□□ -1.95
RNF6Q9Y252 AC092953.2-201ENST00000608000 699 ntBASIC2.89□□□□□ -1.95
RNF6Q9Y252 AC004067.1-201ENST00000608733 700 ntBASIC2.89□□□□□ -1.95
RNF6Q9Y252 AP000254.1-201ENST00000609934 520 ntBASIC2.89□□□□□ -1.95
RNF6Q9Y252 AC006213.4-201ENST00000616184 634 ntBASIC2.89□□□□□ -1.95
RNF6Q9Y252 AC006386.1-201ENST00000619436 415 ntBASIC2.89□□□□□ -1.95
RNF6Q9Y252 AC002550.2-201ENST00000621246 394 ntBASIC2.89□□□□□ -1.95
RNF6Q9Y252 AC079228.1-201ENST00000624774 1049 ntBASIC2.89□□□□□ -1.95
RNF6Q9Y252 AL355596.1-201ENST00000565399 3996 ntBASIC2.89□□□□□ -1.95
RNF6Q9Y252 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.89□□□□□ -1.95
RNF6Q9Y252 AC008568.2-201ENST00000623862 2313 ntBASIC2.88□□□□□ -1.95
RNF6Q9Y252 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
RNF6Q9Y252 AC110774.1-201ENST00000623567 2018 ntBASIC2.88□□□□□ -1.95
RNF6Q9Y252 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
RNF6Q9Y252 MTND5P7-201ENST00000413558 1798 ntBASIC2.88□□□□□ -1.95
RNF6Q9Y252 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
RNF6Q9Y252 RNU1-140P-201ENST00000365040 165 ntBASIC2.88□□□□□ -1.95
RNF6Q9Y252 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC2.88□□□□□ -1.95
RNF6Q9Y252 SNORA1.3-201ENST00000384676 136 ntBASIC2.88□□□□□ -1.95
RNF6Q9Y252 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
RNF6Q9Y252 RPS3AP26-201ENST00000398259 784 ntBASIC2.88□□□□□ -1.95
RNF6Q9Y252 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.88□□□□□ -1.95
RNF6Q9Y252 MTCYBP38-201ENST00000417160 1123 ntBASIC2.88□□□□□ -1.95
RNF6Q9Y252 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC2.88□□□□□ -1.95
RNF6Q9Y252 AL390023.1-201ENST00000428836 262 ntBASIC2.88□□□□□ -1.95
RNF6Q9Y252 AL353705.1-201ENST00000433468 480 ntBASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 163.4 ms