Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 AL109741.2-201ENST00000455561 343 ntBASIC5.73□□□□□ -1.49
SHROOM4Q9ULL8 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC5.73□□□□□ -1.49
SHROOM4Q9ULL8 AC118282.1-201ENST00000506408 765 ntBASIC5.73□□□□□ -1.49
SHROOM4Q9ULL8 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC5.73□□□□□ -1.49
SHROOM4Q9ULL8 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC5.73□□□□□ -1.49
SHROOM4Q9ULL8 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC5.73□□□□□ -1.49
SHROOM4Q9ULL8 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC5.73□□□□□ -1.49
SHROOM4Q9ULL8 CYCSP39-201ENST00000565821 309 ntBASIC5.73□□□□□ -1.49
SHROOM4Q9ULL8 FAM60BP-201ENST00000578364 658 ntBASIC5.73□□□□□ -1.49
SHROOM4Q9ULL8 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC5.73□□□□□ -1.49
SHROOM4Q9ULL8 AC026790.2-201ENST00000606282 430 ntBASIC5.73□□□□□ -1.49
SHROOM4Q9ULL8 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SHROOM4Q9ULL8 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SHROOM4Q9ULL8 AL360181.4-201ENST00000621752 134 ntBASIC5.73□□□□□ -1.49
SHROOM4Q9ULL8 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SHROOM4Q9ULL8 AP000568.1-201ENST00000282964 442 ntBASIC5.72□□□□□ -1.49
SHROOM4Q9ULL8 RNU6-931P-201ENST00000363850 107 ntBASIC5.72□□□□□ -1.49
SHROOM4Q9ULL8 SNORD15B-201ENST00000384714 146 ntBASIC5.72□□□□□ -1.49
SHROOM4Q9ULL8 AL592148.1-201ENST00000413568 445 ntBASIC5.72□□□□□ -1.49
SHROOM4Q9ULL8 RPL21P40-201ENST00000428586 483 ntBASIC5.72□□□□□ -1.49
SHROOM4Q9ULL8 FTH1P1-201ENST00000437933 532 ntBASIC5.72□□□□□ -1.49
SHROOM4Q9ULL8 AL354941.1-201ENST00000438600 464 ntBASIC5.72□□□□□ -1.49
SHROOM4Q9ULL8 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC5.72□□□□□ -1.49
SHROOM4Q9ULL8 EEF1E1P1-201ENST00000446998 430 ntBASIC5.72□□□□□ -1.49
SHROOM4Q9ULL8 EEF1B2P7-201ENST00000451177 676 ntBASIC5.72□□□□□ -1.49
SHROOM4Q9ULL8 ZNF736P8Y-201ENST00000451913 669 ntBASIC5.72□□□□□ -1.49
SHROOM4Q9ULL8 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC5.72□□□□□ -1.49
SHROOM4Q9ULL8 TXNP6-201ENST00000510190 310 ntBASIC5.72□□□□□ -1.49
SHROOM4Q9ULL8 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
SHROOM4Q9ULL8 UBTFL10-201ENST00000528532 562 ntBASIC5.72□□□□□ -1.49
SHROOM4Q9ULL8 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC5.72□□□□□ -1.49
SHROOM4Q9ULL8 SNRPGP16-201ENST00000533275 226 ntBASIC5.72□□□□□ -1.49
SHROOM4Q9ULL8 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC5.72□□□□□ -1.49
SHROOM4Q9ULL8 MTATP6P24-201ENST00000576835 677 ntBASIC5.72□□□□□ -1.49
SHROOM4Q9ULL8 AL353997.4-201ENST00000586196 166 ntBASIC5.72□□□□□ -1.49
SHROOM4Q9ULL8 AP001029.3-201ENST00000588063 596 ntBASIC5.72□□□□□ -1.49
SHROOM4Q9ULL8 AC011451.2-201ENST00000604303 598 ntBASIC5.72□□□□□ -1.49
SHROOM4Q9ULL8 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC5.72□□□□□ -1.49
SHROOM4Q9ULL8 VIS1.1-201ENST00000610517 203 ntBASIC5.72□□□□□ -1.49
SHROOM4Q9ULL8 AC007490.1-201ENST00000624321 703 ntBASIC5.72□□□□□ -1.49
SHROOM4Q9ULL8 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
SHROOM4Q9ULL8 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC5.72□□□□□ -1.49
SHROOM4Q9ULL8 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC5.72□□□□□ -1.49
SHROOM4Q9ULL8 GABRG2-229ENST00000641017 3628 ntBASIC5.72□□□□□ -1.49
SHROOM4Q9ULL8 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SHROOM4Q9ULL8 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC5.72□□□□□ -1.49
SHROOM4Q9ULL8 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SHROOM4Q9ULL8 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
SHROOM4Q9ULL8 FRG1BP-201ENST00000278882 761 ntBASIC5.71□□□□□ -1.49
SHROOM4Q9ULL8 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
SHROOM4Q9ULL8 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC5.71□□□□□ -1.49
SHROOM4Q9ULL8 CD2-201ENST00000369477 478 ntTSL 2 BASIC5.71□□□□□ -1.49
SHROOM4Q9ULL8 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC5.71□□□□□ -1.49
SHROOM4Q9ULL8 RPS3AP26-201ENST00000398259 784 ntBASIC5.71□□□□□ -1.49
SHROOM4Q9ULL8 YWHAZP7-201ENST00000436906 631 ntBASIC5.71□□□□□ -1.49
SHROOM4Q9ULL8 AC010095.1-201ENST00000443543 144 ntBASIC5.71□□□□□ -1.49
SHROOM4Q9ULL8 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC5.71□□□□□ -1.49
SHROOM4Q9ULL8 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC5.71□□□□□ -1.49
SHROOM4Q9ULL8 AC093677.1-201ENST00000514414 678 ntBASIC5.71□□□□□ -1.49
SHROOM4Q9ULL8 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC5.71□□□□□ -1.49
SHROOM4Q9ULL8 AC090888.2-201ENST00000559765 1144 ntBASIC5.71□□□□□ -1.49
SHROOM4Q9ULL8 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC5.71□□□□□ -1.49
SHROOM4Q9ULL8 MIR7843-201ENST00000622274 79 ntBASIC5.71□□□□□ -1.49
SHROOM4Q9ULL8 AP000770.2-201ENST00000623694 100 ntBASIC5.71□□□□□ -1.49
SHROOM4Q9ULL8 AC066616.2-201ENST00000559334 1481 ntBASIC5.71□□□□□ -1.5
SHROOM4Q9ULL8 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC5.71□□□□□ -1.5
SHROOM4Q9ULL8 AC110754.1-201ENST00000399740 601 ntBASIC5.71□□□□□ -1.5
SHROOM4Q9ULL8 AC003685.2-201ENST00000422795 395 ntBASIC5.71□□□□□ -1.5
SHROOM4Q9ULL8 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC5.71□□□□□ -1.5
SHROOM4Q9ULL8 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC5.71□□□□□ -1.5
SHROOM4Q9ULL8 AC034159.1-201ENST00000513885 583 ntBASIC5.71□□□□□ -1.5
SHROOM4Q9ULL8 AC023538.1-201ENST00000534576 736 ntBASIC5.71□□□□□ -1.5
SHROOM4Q9ULL8 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC5.71□□□□□ -1.5
SHROOM4Q9ULL8 AL133507.1-201ENST00000605269 557 ntBASIC5.71□□□□□ -1.5
SHROOM4Q9ULL8 AC004832.5-201ENST00000608677 401 ntBASIC5.71□□□□□ -1.5
SHROOM4Q9ULL8 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC5.71□□□□□ -1.5
SHROOM4Q9ULL8 AL139418.1-201ENST00000613613 177 ntBASIC5.71□□□□□ -1.5
SHROOM4Q9ULL8 AC103706.2-201ENST00000638080 240 ntBASIC5.71□□□□□ -1.5
SHROOM4Q9ULL8 AF127577.6-201ENST00000623352 2191 ntBASIC5.7□□□□□ -1.5
SHROOM4Q9ULL8 EXOC5P1-201ENST00000510543 1969 ntBASIC5.7□□□□□ -1.5
SHROOM4Q9ULL8 AC119751.3-201ENST00000399720 670 ntBASIC5.7□□□□□ -1.5
SHROOM4Q9ULL8 RNU4-65P-201ENST00000410473 140 ntBASIC5.7□□□□□ -1.5
SHROOM4Q9ULL8 TXNL1P1-201ENST00000429528 554 ntBASIC5.7□□□□□ -1.5
SHROOM4Q9ULL8 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
SHROOM4Q9ULL8 MTND1P31-201ENST00000449206 961 ntBASIC5.7□□□□□ -1.5
SHROOM4Q9ULL8 AC104685.1-201ENST00000502445 371 ntBASIC5.7□□□□□ -1.5
SHROOM4Q9ULL8 AC147055.4-201ENST00000504399 745 ntBASIC5.7□□□□□ -1.5
SHROOM4Q9ULL8 MTND5P4-201ENST00000514978 288 ntBASIC5.7□□□□□ -1.5
SHROOM4Q9ULL8 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC5.7□□□□□ -1.5
SHROOM4Q9ULL8 ELOCP32-201ENST00000548625 324 ntBASIC5.7□□□□□ -1.5
SHROOM4Q9ULL8 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC5.7□□□□□ -1.5
SHROOM4Q9ULL8 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC5.7□□□□□ -1.5
SHROOM4Q9ULL8 AC008507.1-201ENST00000587506 734 ntBASIC5.7□□□□□ -1.5
SHROOM4Q9ULL8 AL022099.1-201ENST00000604551 712 ntBASIC5.7□□□□□ -1.5
SHROOM4Q9ULL8 AL590099.1-201ENST00000615276 138 ntBASIC5.7□□□□□ -1.5
SHROOM4Q9ULL8 RMST_9.1-201ENST00000619945 193 ntBASIC5.7□□□□□ -1.5
SHROOM4Q9ULL8 AC007318.2-201ENST00000620999 243 ntBASIC5.7□□□□□ -1.5
SHROOM4Q9ULL8 AC243829.7-201ENST00000633081 225 ntBASIC5.7□□□□□ -1.5
SHROOM4Q9ULL8 ELF2P3-201ENST00000445099 1506 ntBASIC5.69□□□□□ -1.5
SHROOM4Q9ULL8 ANKRD36BP1-201ENST00000358576 1779 ntBASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms