Protein–RNA interactions for Protein: Q9UKV0

HDAC9, Histone deacetylase 9, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9Q9UKV0 AC084198.1-201ENST00000477747 402 ntBASIC4.43□□□□□ -1.7
HDAC9Q9UKV0 RN7SL429P-201ENST00000479090 223 ntBASIC4.43□□□□□ -1.7
HDAC9Q9UKV0 RN7SL489P-201ENST00000486185 223 ntBASIC4.43□□□□□ -1.7
HDAC9Q9UKV0 RN7SL327P-201ENST00000488659 223 ntBASIC4.43□□□□□ -1.7
HDAC9Q9UKV0 RPL31P61-201ENST00000496160 376 ntBASIC4.43□□□□□ -1.7
HDAC9Q9UKV0 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.43□□□□□ -1.7
HDAC9Q9UKV0 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.43□□□□□ -1.7
HDAC9Q9UKV0 AC109464.2-201ENST00000510242 943 ntBASIC4.43□□□□□ -1.7
HDAC9Q9UKV0 RNU6-1003P-201ENST00000517099 105 ntBASIC4.43□□□□□ -1.7
HDAC9Q9UKV0 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC4.43□□□□□ -1.7
HDAC9Q9UKV0 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.43□□□□□ -1.7
HDAC9Q9UKV0 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC4.43□□□□□ -1.7
HDAC9Q9UKV0 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.43□□□□□ -1.7
HDAC9Q9UKV0 AC091805.2-201ENST00000603848 235 ntBASIC4.43□□□□□ -1.7
HDAC9Q9UKV0 AC006566.1-201ENST00000608943 513 ntBASIC4.43□□□□□ -1.7
HDAC9Q9UKV0 AC128687.2-201ENST00000609657 566 ntBASIC4.43□□□□□ -1.7
HDAC9Q9UKV0 AC131902.3-201ENST00000611767 581 ntBASIC4.43□□□□□ -1.7
HDAC9Q9UKV0 RN7SL853P-201ENST00000617250 223 ntBASIC4.43□□□□□ -1.7
HDAC9Q9UKV0 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.43□□□□□ -1.7
HDAC9Q9UKV0 AP000553.6-201ENST00000641242 118 ntBASIC4.43□□□□□ -1.7
HDAC9Q9UKV0 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HDAC9Q9UKV0 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.43□□□□□ -1.7
HDAC9Q9UKV0 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
HDAC9Q9UKV0 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
HDAC9Q9UKV0 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4.43□□□□□ -1.7
HDAC9Q9UKV0 AC007823.1-201ENST00000569932 1566 ntBASIC4.43□□□□□ -1.7
HDAC9Q9UKV0 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.43□□□□□ -1.7
HDAC9Q9UKV0 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC4.43□□□□□ -1.7
HDAC9Q9UKV0 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HDAC9Q9UKV0 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
HDAC9Q9UKV0 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HDAC9Q9UKV0 Y_RNA.234-201ENST00000364409 97 ntBASIC4.42□□□□□ -1.7
HDAC9Q9UKV0 RNU6-629P-201ENST00000384061 103 ntBASIC4.42□□□□□ -1.7
HDAC9Q9UKV0 SNORD115.1-201ENST00000391109 76 ntBASIC4.42□□□□□ -1.7
HDAC9Q9UKV0 RNU2-15P-201ENST00000410692 191 ntBASIC4.42□□□□□ -1.7
HDAC9Q9UKV0 RNU2-71P-201ENST00000411395 189 ntBASIC4.42□□□□□ -1.7
HDAC9Q9UKV0 AF274854.1-201ENST00000413236 615 ntBASIC4.42□□□□□ -1.7
HDAC9Q9UKV0 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC4.42□□□□□ -1.7
HDAC9Q9UKV0 AC245054.1-201ENST00000420944 258 ntBASIC4.42□□□□□ -1.7
HDAC9Q9UKV0 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.42□□□□□ -1.7
HDAC9Q9UKV0 BX890604.2-201ENST00000427883 474 ntBASIC4.42□□□□□ -1.7
HDAC9Q9UKV0 VDAC1P3-201ENST00000434069 851 ntBASIC4.42□□□□□ -1.7
HDAC9Q9UKV0 FAM103A2P-201ENST00000444122 354 ntBASIC4.42□□□□□ -1.7
HDAC9Q9UKV0 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC4.42□□□□□ -1.7
HDAC9Q9UKV0 MTND1P27-201ENST00000451117 902 ntBASIC4.42□□□□□ -1.7
HDAC9Q9UKV0 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC4.42□□□□□ -1.7
HDAC9Q9UKV0 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC4.42□□□□□ -1.7
HDAC9Q9UKV0 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.42□□□□□ -1.7
HDAC9Q9UKV0 SNRPGP3-201ENST00000469405 227 ntBASIC4.42□□□□□ -1.7
HDAC9Q9UKV0 LARP1BP2-201ENST00000486594 519 ntBASIC4.42□□□□□ -1.7
HDAC9Q9UKV0 AC023424.2-201ENST00000493479 777 ntBASIC4.42□□□□□ -1.7
HDAC9Q9UKV0 AC034222.1-201ENST00000494052 532 ntBASIC4.42□□□□□ -1.7
HDAC9Q9UKV0 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC4.42□□□□□ -1.7
HDAC9Q9UKV0 RN7SKP244-201ENST00000516513 307 ntBASIC4.42□□□□□ -1.7
HDAC9Q9UKV0 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.42□□□□□ -1.7
HDAC9Q9UKV0 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC4.42□□□□□ -1.7
HDAC9Q9UKV0 ZNF519P3-201ENST00000557158 1032 ntBASIC4.42□□□□□ -1.7
HDAC9Q9UKV0 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC4.42□□□□□ -1.7
HDAC9Q9UKV0 TPMTP1-201ENST00000592307 737 ntBASIC4.42□□□□□ -1.7
HDAC9Q9UKV0 BNIP3P8-201ENST00000597863 560 ntBASIC4.42□□□□□ -1.7
HDAC9Q9UKV0 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC4.42□□□□□ -1.7
HDAC9Q9UKV0 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HDAC9Q9UKV0 AC079684.1-201ENST00000621405 437 ntBASIC4.42□□□□□ -1.7
HDAC9Q9UKV0 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HDAC9Q9UKV0 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HDAC9Q9UKV0 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
HDAC9Q9UKV0 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.41□□□□□ -1.7
HDAC9Q9UKV0 AC004925.1-201ENST00000624256 2706 ntBASIC4.41□□□□□ -1.7
HDAC9Q9UKV0 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HDAC9Q9UKV0 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HDAC9Q9UKV0 RNY4P24-201ENST00000362735 96 ntBASIC4.41□□□□□ -1.7
HDAC9Q9UKV0 RNA5SP258-201ENST00000362750 119 ntBASIC4.41□□□□□ -1.7
HDAC9Q9UKV0 RNU6-853P-201ENST00000364306 107 ntBASIC4.41□□□□□ -1.7
HDAC9Q9UKV0 SNORD6-201ENST00000365444 73 ntBASIC4.41□□□□□ -1.7
HDAC9Q9UKV0 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC4.41□□□□□ -1.7
HDAC9Q9UKV0 USP9YP13-201ENST00000417797 480 ntBASIC4.41□□□□□ -1.7
HDAC9Q9UKV0 USP9YP36-201ENST00000424581 829 ntBASIC4.41□□□□□ -1.7
HDAC9Q9UKV0 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC4.41□□□□□ -1.7
HDAC9Q9UKV0 AL033528.1-201ENST00000453780 140 ntBASIC4.41□□□□□ -1.7
HDAC9Q9UKV0 RPS20P24-201ENST00000457473 361 ntBASIC4.41□□□□□ -1.7
HDAC9Q9UKV0 RPL23AP55-201ENST00000498163 452 ntBASIC4.41□□□□□ -1.7
HDAC9Q9UKV0 AC112204.1-201ENST00000502591 103 ntBASIC4.41□□□□□ -1.7
HDAC9Q9UKV0 RPL37P25-201ENST00000507308 276 ntBASIC4.41□□□□□ -1.7
HDAC9Q9UKV0 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HDAC9Q9UKV0 RNU6-27P-201ENST00000516146 107 ntBASIC4.41□□□□□ -1.7
HDAC9Q9UKV0 RNU6-714P-201ENST00000516963 103 ntBASIC4.41□□□□□ -1.7
HDAC9Q9UKV0 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.41□□□□□ -1.7
HDAC9Q9UKV0 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HDAC9Q9UKV0 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC4.41□□□□□ -1.7
HDAC9Q9UKV0 AC025946.2-201ENST00000603398 234 ntBASIC4.41□□□□□ -1.7
HDAC9Q9UKV0 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HDAC9Q9UKV0 AC018755.4-201ENST00000619715 454 ntBASIC4.41□□□□□ -1.7
HDAC9Q9UKV0 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HDAC9Q9UKV0 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HDAC9Q9UKV0 IPO8P1-201ENST00000455509 3109 ntBASIC4.41□□□□□ -1.7
HDAC9Q9UKV0 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
HDAC9Q9UKV0 MFSD8-236ENST00000641509 4050 ntBASIC4.41□□□□□ -1.7
HDAC9Q9UKV0 AC068254.2-201ENST00000623938 3577 ntBASIC4.4□□□□□ -1.7
HDAC9Q9UKV0 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
HDAC9Q9UKV0 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms