Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 RNU1-109P-201ENST00000383960 147 ntBASIC3.12□□□□□ -1.91
CTNNA3Q9UI47 RNU6-1197P-201ENST00000391183 107 ntBASIC3.12□□□□□ -1.91
CTNNA3Q9UI47 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC3.12□□□□□ -1.91
CTNNA3Q9UI47 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.12□□□□□ -1.91
CTNNA3Q9UI47 AL136133.1-201ENST00000413694 376 ntBASIC3.12□□□□□ -1.91
CTNNA3Q9UI47 RPL7P37-201ENST00000425095 738 ntBASIC3.12□□□□□ -1.91
CTNNA3Q9UI47 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.12□□□□□ -1.91
CTNNA3Q9UI47 UBE2D3P3-201ENST00000426992 425 ntBASIC3.12□□□□□ -1.91
CTNNA3Q9UI47 ZYG11AP1-201ENST00000430329 837 ntBASIC3.12□□□□□ -1.91
CTNNA3Q9UI47 AL512637.2-201ENST00000431287 1256 ntBASIC3.12□□□□□ -1.91
CTNNA3Q9UI47 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3.12□□□□□ -1.91
CTNNA3Q9UI47 AP000936.2-201ENST00000447151 681 ntBASIC3.12□□□□□ -1.91
CTNNA3Q9UI47 ST13P20-201ENST00000447996 1065 ntBASIC3.12□□□□□ -1.91
CTNNA3Q9UI47 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC3.12□□□□□ -1.91
CTNNA3Q9UI47 XACT-201ENST00000468762 497 ntTSL 5 BASIC3.12□□□□□ -1.91
CTNNA3Q9UI47 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC3.12□□□□□ -1.91
CTNNA3Q9UI47 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.12□□□□□ -1.91
CTNNA3Q9UI47 AC100870.1-201ENST00000522035 505 ntBASIC3.12□□□□□ -1.91
CTNNA3Q9UI47 MTCO1P47-201ENST00000523889 1271 ntBASIC3.12□□□□□ -1.91
CTNNA3Q9UI47 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
CTNNA3Q9UI47 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
CTNNA3Q9UI47 AC013444.2-201ENST00000603317 787 ntBASIC3.12□□□□□ -1.91
CTNNA3Q9UI47 AC104763.2-201ENST00000604179 382 ntBASIC3.12□□□□□ -1.91
CTNNA3Q9UI47 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
CTNNA3Q9UI47 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.12□□□□□ -1.91
CTNNA3Q9UI47 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
CTNNA3Q9UI47 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
CTNNA3Q9UI47 TPTE2P4-201ENST00000258589 1605 ntBASIC3.11□□□□□ -1.91
CTNNA3Q9UI47 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.11□□□□□ -1.91
CTNNA3Q9UI47 RNU6-878P-201ENST00000384578 110 ntBASIC3.11□□□□□ -1.91
CTNNA3Q9UI47 MIR592-201ENST00000384959 97 ntBASIC3.11□□□□□ -1.91
CTNNA3Q9UI47 NPM1P11-201ENST00000417106 855 ntBASIC3.11□□□□□ -1.91
CTNNA3Q9UI47 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.11□□□□□ -1.91
CTNNA3Q9UI47 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.11□□□□□ -1.91
CTNNA3Q9UI47 AL513328.1-201ENST00000446460 224 ntBASIC3.11□□□□□ -1.91
CTNNA3Q9UI47 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.11□□□□□ -1.91
CTNNA3Q9UI47 OR51B8P-201ENST00000449892 769 ntBASIC3.11□□□□□ -1.91
CTNNA3Q9UI47 RNU7-140P-201ENST00000459546 60 ntBASIC3.11□□□□□ -1.91
CTNNA3Q9UI47 RPL31P60-201ENST00000478450 367 ntBASIC3.11□□□□□ -1.91
CTNNA3Q9UI47 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.11□□□□□ -1.91
CTNNA3Q9UI47 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC3.11□□□□□ -1.91
CTNNA3Q9UI47 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.11□□□□□ -1.91
CTNNA3Q9UI47 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CTNNA3Q9UI47 AL359273.1-201ENST00000510918 627 ntBASIC3.11□□□□□ -1.91
CTNNA3Q9UI47 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3.11□□□□□ -1.91
CTNNA3Q9UI47 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.11□□□□□ -1.91
CTNNA3Q9UI47 AL031176.1-201ENST00000604554 466 ntBASIC3.11□□□□□ -1.91
CTNNA3Q9UI47 BNIP3P10-201ENST00000605360 577 ntBASIC3.11□□□□□ -1.91
CTNNA3Q9UI47 AP000254.1-201ENST00000609934 520 ntBASIC3.11□□□□□ -1.91
CTNNA3Q9UI47 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC3.11□□□□□ -1.91
CTNNA3Q9UI47 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.11□□□□□ -1.91
CTNNA3Q9UI47 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CTNNA3Q9UI47 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CTNNA3Q9UI47 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
CTNNA3Q9UI47 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.1□□□□□ -1.91
CTNNA3Q9UI47 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CTNNA3Q9UI47 RNU6-198P-201ENST00000384258 104 ntBASIC3.1□□□□□ -1.91
CTNNA3Q9UI47 AL133264.1-201ENST00000407157 562 ntBASIC3.1□□□□□ -1.91
CTNNA3Q9UI47 RNU2-52P-201ENST00000410680 190 ntBASIC3.1□□□□□ -1.91
CTNNA3Q9UI47 TAF13P2-201ENST00000416876 286 ntBASIC3.1□□□□□ -1.91
CTNNA3Q9UI47 USP9YP20-201ENST00000419224 558 ntBASIC3.1□□□□□ -1.91
CTNNA3Q9UI47 OFD1P2Y-201ENST00000421895 1149 ntBASIC3.1□□□□□ -1.91
CTNNA3Q9UI47 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.1□□□□□ -1.91
CTNNA3Q9UI47 RPL23AP74-201ENST00000437246 471 ntBASIC3.1□□□□□ -1.91
CTNNA3Q9UI47 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC3.1□□□□□ -1.91
CTNNA3Q9UI47 GXYLT1P1-201ENST00000446657 490 ntBASIC3.1□□□□□ -1.91
CTNNA3Q9UI47 AL592447.1-201ENST00000447592 540 ntBASIC3.1□□□□□ -1.91
CTNNA3Q9UI47 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC3.1□□□□□ -1.91
CTNNA3Q9UI47 AL049714.1-201ENST00000466686 347 ntBASIC3.1□□□□□ -1.91
CTNNA3Q9UI47 MTCO2P9-201ENST00000503214 694 ntBASIC3.1□□□□□ -1.91
CTNNA3Q9UI47 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC3.1□□□□□ -1.91
CTNNA3Q9UI47 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.1□□□□□ -1.91
CTNNA3Q9UI47 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC3.1□□□□□ -1.91
CTNNA3Q9UI47 CASP1P1-201ENST00000526345 212 ntBASIC3.1□□□□□ -1.91
CTNNA3Q9UI47 AP001317.1-201ENST00000531194 960 ntBASIC3.1□□□□□ -1.91
CTNNA3Q9UI47 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC3.1□□□□□ -1.91
CTNNA3Q9UI47 MIR4666A-201ENST00000580160 79 ntBASIC3.1□□□□□ -1.91
CTNNA3Q9UI47 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC3.1□□□□□ -1.91
CTNNA3Q9UI47 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.1□□□□□ -1.91
CTNNA3Q9UI47 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC3.1□□□□□ -1.91
CTNNA3Q9UI47 AL160237.3-201ENST00000604114 1013 ntBASIC3.1□□□□□ -1.91
CTNNA3Q9UI47 AL136363.1-201ENST00000605349 337 ntBASIC3.1□□□□□ -1.91
CTNNA3Q9UI47 AL161734.1-201ENST00000609720 557 ntBASIC3.1□□□□□ -1.91
CTNNA3Q9UI47 AL512506.1-201ENST00000613918 449 ntBASIC3.1□□□□□ -1.91
CTNNA3Q9UI47 AC092608.2-201ENST00000624427 218 ntBASIC3.1□□□□□ -1.91
CTNNA3Q9UI47 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CTNNA3Q9UI47 OR4G11P-202ENST00000642116 1414 ntBASIC3.1□□□□□ -1.91
CTNNA3Q9UI47 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CTNNA3Q9UI47 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CTNNA3Q9UI47 ZNF519P1-201ENST00000449011 1626 ntBASIC3.09□□□□□ -1.91
CTNNA3Q9UI47 VTRNA1-1-201ENST00000363120 99 ntBASIC3.09□□□□□ -1.91
CTNNA3Q9UI47 RNU6-839P-201ENST00000363347 108 ntBASIC3.09□□□□□ -1.91
CTNNA3Q9UI47 RNU6-354P-201ENST00000383862 107 ntBASIC3.09□□□□□ -1.91
CTNNA3Q9UI47 RNU6-610P-201ENST00000384264 107 ntBASIC3.09□□□□□ -1.91
CTNNA3Q9UI47 RNA5SP354-201ENST00000391247 136 ntBASIC3.09□□□□□ -1.91
CTNNA3Q9UI47 AL035405.1-201ENST00000400795 710 ntBASIC3.09□□□□□ -1.91
CTNNA3Q9UI47 AL356057.2-201ENST00000403318 432 ntBASIC3.09□□□□□ -1.91
CTNNA3Q9UI47 AC092638.1-201ENST00000411966 1275 ntBASIC3.09□□□□□ -1.91
CTNNA3Q9UI47 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC3.09□□□□□ -1.91
CTNNA3Q9UI47 AC234781.2-201ENST00000426370 994 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms