Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.39□□□□□ -1.87
CLIP2Q9UDT6 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.39□□□□□ -1.87
CLIP2Q9UDT6 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.39□□□□□ -1.87
CLIP2Q9UDT6 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.39□□□□□ -1.87
CLIP2Q9UDT6 AC245036.5-201ENST00000596330 847 ntBASIC3.39□□□□□ -1.87
CLIP2Q9UDT6 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.39□□□□□ -1.87
CLIP2Q9UDT6 AC012669.1-201ENST00000603209 283 ntBASIC3.39□□□□□ -1.87
CLIP2Q9UDT6 AL450336.1-201ENST00000605180 586 ntBASIC3.39□□□□□ -1.87
CLIP2Q9UDT6 AL157392.4-201ENST00000609756 345 ntBASIC3.39□□□□□ -1.87
CLIP2Q9UDT6 AC069234.5-201ENST00000611056 416 ntBASIC3.39□□□□□ -1.87
CLIP2Q9UDT6 AC024257.5-201ENST00000612739 531 ntBASIC3.39□□□□□ -1.87
CLIP2Q9UDT6 AC068787.1-201ENST00000623908 691 ntBASIC3.39□□□□□ -1.87
CLIP2Q9UDT6 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CLIP2Q9UDT6 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CLIP2Q9UDT6 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CLIP2Q9UDT6 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CLIP2Q9UDT6 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
CLIP2Q9UDT6 RNU5E-10P-201ENST00000363506 118 ntBASIC3.38□□□□□ -1.87
CLIP2Q9UDT6 snoZ40.1-201ENST00000364540 72 ntBASIC3.38□□□□□ -1.87
CLIP2Q9UDT6 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
CLIP2Q9UDT6 SNORA26.7-201ENST00000391288 122 ntBASIC3.38□□□□□ -1.87
CLIP2Q9UDT6 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.38□□□□□ -1.87
CLIP2Q9UDT6 ATG3P1-201ENST00000419507 911 ntBASIC3.38□□□□□ -1.87
CLIP2Q9UDT6 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC3.38□□□□□ -1.87
CLIP2Q9UDT6 AL365338.1-201ENST00000422282 858 ntBASIC3.38□□□□□ -1.87
CLIP2Q9UDT6 EZH2P1-201ENST00000431167 291 ntBASIC3.38□□□□□ -1.87
CLIP2Q9UDT6 VN1R108P-201ENST00000431580 830 ntBASIC3.38□□□□□ -1.87
CLIP2Q9UDT6 RPL23AP74-201ENST00000437246 471 ntBASIC3.38□□□□□ -1.87
CLIP2Q9UDT6 COX6CP2-201ENST00000444980 225 ntBASIC3.38□□□□□ -1.87
CLIP2Q9UDT6 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.38□□□□□ -1.87
CLIP2Q9UDT6 snoU109.3-201ENST00000459477 145 ntBASIC3.38□□□□□ -1.87
CLIP2Q9UDT6 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CLIP2Q9UDT6 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CLIP2Q9UDT6 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.38□□□□□ -1.87
CLIP2Q9UDT6 AC010625.1-201ENST00000511296 403 ntBASIC3.38□□□□□ -1.87
CLIP2Q9UDT6 RNU6-56P-201ENST00000516986 93 ntBASIC3.38□□□□□ -1.87
CLIP2Q9UDT6 ERHP1-201ENST00000523006 310 ntBASIC3.38□□□□□ -1.87
CLIP2Q9UDT6 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC3.38□□□□□ -1.87
CLIP2Q9UDT6 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.38□□□□□ -1.87
CLIP2Q9UDT6 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3.38□□□□□ -1.87
CLIP2Q9UDT6 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CLIP2Q9UDT6 COX6CP3-201ENST00000580869 223 ntBASIC3.38□□□□□ -1.87
CLIP2Q9UDT6 ELOCP29-201ENST00000588193 334 ntBASIC3.38□□□□□ -1.87
CLIP2Q9UDT6 AL358072.1-201ENST00000604156 575 ntBASIC3.38□□□□□ -1.87
CLIP2Q9UDT6 AC009220.3-201ENST00000604318 586 ntBASIC3.38□□□□□ -1.87
CLIP2Q9UDT6 AL355810.1-201ENST00000614629 552 ntBASIC3.38□□□□□ -1.87
CLIP2Q9UDT6 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC3.38□□□□□ -1.87
CLIP2Q9UDT6 AP000676.4-201ENST00000624659 623 ntBASIC3.38□□□□□ -1.87
CLIP2Q9UDT6 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.38□□□□□ -1.87
CLIP2Q9UDT6 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.38□□□□□ -1.87
CLIP2Q9UDT6 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.38□□□□□ -1.87
CLIP2Q9UDT6 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
CLIP2Q9UDT6 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CLIP2Q9UDT6 AC096644.4-201ENST00000563417 2912 ntBASIC3.37□□□□□ -1.87
CLIP2Q9UDT6 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CLIP2Q9UDT6 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
CLIP2Q9UDT6 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CLIP2Q9UDT6 AL592310.1-201ENST00000414330 671 ntBASIC3.37□□□□□ -1.87
CLIP2Q9UDT6 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.37□□□□□ -1.87
CLIP2Q9UDT6 AC092447.6-201ENST00000414578 210 ntBASIC3.37□□□□□ -1.87
CLIP2Q9UDT6 AL451074.5-201ENST00000415894 435 ntBASIC3.37□□□□□ -1.87
CLIP2Q9UDT6 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CLIP2Q9UDT6 RPL7P34-201ENST00000433316 712 ntBASIC3.37□□□□□ -1.87
CLIP2Q9UDT6 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC3.37□□□□□ -1.87
CLIP2Q9UDT6 MTND4LP10-201ENST00000435146 291 ntBASIC3.37□□□□□ -1.87
CLIP2Q9UDT6 RPS24P13-201ENST00000442520 397 ntBASIC3.37□□□□□ -1.87
CLIP2Q9UDT6 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.37□□□□□ -1.87
CLIP2Q9UDT6 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.37□□□□□ -1.87
CLIP2Q9UDT6 RFC5P1-201ENST00000454419 874 ntBASIC3.37□□□□□ -1.87
CLIP2Q9UDT6 AC004924.1-201ENST00000480160 781 ntBASIC3.37□□□□□ -1.87
CLIP2Q9UDT6 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC3.37□□□□□ -1.87
CLIP2Q9UDT6 VN1R104P-201ENST00000505115 1009 ntBASIC3.37□□□□□ -1.87
CLIP2Q9UDT6 RNU6-276P-201ENST00000516114 96 ntBASIC3.37□□□□□ -1.87
CLIP2Q9UDT6 RNU6-1095P-201ENST00000516148 108 ntBASIC3.37□□□□□ -1.87
CLIP2Q9UDT6 RNA5SP76-201ENST00000516277 87 ntBASIC3.37□□□□□ -1.87
CLIP2Q9UDT6 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC3.37□□□□□ -1.87
CLIP2Q9UDT6 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.37□□□□□ -1.87
CLIP2Q9UDT6 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.37□□□□□ -1.87
CLIP2Q9UDT6 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.37□□□□□ -1.87
CLIP2Q9UDT6 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC3.37□□□□□ -1.87
CLIP2Q9UDT6 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.37□□□□□ -1.87
CLIP2Q9UDT6 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC3.37□□□□□ -1.87
CLIP2Q9UDT6 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC3.37□□□□□ -1.87
CLIP2Q9UDT6 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC3.37□□□□□ -1.87
CLIP2Q9UDT6 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC3.37□□□□□ -1.87
CLIP2Q9UDT6 AC234772.3-201ENST00000602277 528 ntBASIC3.37□□□□□ -1.87
CLIP2Q9UDT6 AL627309.6-201ENST00000606857 840 ntBASIC3.37□□□□□ -1.87
CLIP2Q9UDT6 AC007998.5-201ENST00000622938 237 ntBASIC3.37□□□□□ -1.87
CLIP2Q9UDT6 AC120349.2-201ENST00000625002 298 ntBASIC3.37□□□□□ -1.87
CLIP2Q9UDT6 AC090897.3-201ENST00000636973 1157 ntBASIC3.37□□□□□ -1.87
CLIP2Q9UDT6 U6.101-201ENST00000637707 76 ntBASIC3.37□□□□□ -1.87
CLIP2Q9UDT6 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CLIP2Q9UDT6 AC107982.1-201ENST00000507171 1300 ntBASIC3.37□□□□□ -1.87
CLIP2Q9UDT6 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.36□□□□□ -1.87
CLIP2Q9UDT6 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CLIP2Q9UDT6 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CLIP2Q9UDT6 RNU6-1074P-201ENST00000383995 104 ntBASIC3.36□□□□□ -1.87
CLIP2Q9UDT6 SNORD116-2-201ENST00000384274 95 ntBASIC3.36□□□□□ -1.87
CLIP2Q9UDT6 SNORD116-6-201ENST00000384711 96 ntBASIC3.36□□□□□ -1.87
CLIP2Q9UDT6 SNORA40.2-201ENST00000390847 128 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms