Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AL139421.1-201ENST00000423010 169 ntBASIC2.58□□□□□ -2
CLCF1Q9UBD9 AL953862.1-201ENST00000423016 168 ntBASIC2.58□□□□□ -2
CLCF1Q9UBD9 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC2.58□□□□□ -2
CLCF1Q9UBD9 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC2.58□□□□□ -2
CLCF1Q9UBD9 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC2.58□□□□□ -2
CLCF1Q9UBD9 SNRPEP4-201ENST00000435815 279 ntBASIC2.58□□□□□ -2
CLCF1Q9UBD9 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC2.58□□□□□ -2
CLCF1Q9UBD9 AC105272.1-201ENST00000438604 198 ntBASIC2.58□□□□□ -2
CLCF1Q9UBD9 RPL17P49-201ENST00000443728 411 ntBASIC2.58□□□□□ -2
CLCF1Q9UBD9 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.58□□□□□ -2
CLCF1Q9UBD9 OR6K5P-201ENST00000447050 945 ntBASIC2.58□□□□□ -2
CLCF1Q9UBD9 AL162389.1-201ENST00000449233 177 ntBASIC2.58□□□□□ -2
CLCF1Q9UBD9 NIPA2P5-201ENST00000452282 464 ntBASIC2.58□□□□□ -2
CLCF1Q9UBD9 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC2.58□□□□□ -2
CLCF1Q9UBD9 BX322784.1-201ENST00000455793 1077 ntBASIC2.58□□□□□ -2
CLCF1Q9UBD9 snoU13.8-201ENST00000458890 104 ntBASIC2.58□□□□□ -2
CLCF1Q9UBD9 SNORA59A-201ENST00000459326 152 ntBASIC2.58□□□□□ -2
CLCF1Q9UBD9 RPL31P50-201ENST00000471002 296 ntBASIC2.58□□□□□ -2
CLCF1Q9UBD9 AC108729.1-201ENST00000487812 947 ntBASIC2.58□□□□□ -2
CLCF1Q9UBD9 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC2.58□□□□□ -2
CLCF1Q9UBD9 CBX3P3-201ENST00000508108 532 ntBASIC2.58□□□□□ -2
CLCF1Q9UBD9 MTND4LP22-201ENST00000508209 276 ntBASIC2.58□□□□□ -2
CLCF1Q9UBD9 AC026801.2-201ENST00000515352 425 ntBASIC2.58□□□□□ -2
CLCF1Q9UBD9 RNU6-150P-201ENST00000516237 95 ntBASIC2.58□□□□□ -2
CLCF1Q9UBD9 RNA5SP367-201ENST00000516557 118 ntBASIC2.58□□□□□ -2
CLCF1Q9UBD9 AC090136.1-201ENST00000520009 240 ntBASIC2.58□□□□□ -2
CLCF1Q9UBD9 AP000889.1-201ENST00000530968 660 ntBASIC2.58□□□□□ -2
CLCF1Q9UBD9 AL163153.1-201ENST00000554223 283 ntBASIC2.58□□□□□ -2
CLCF1Q9UBD9 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.58□□□□□ -2
CLCF1Q9UBD9 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC2.58□□□□□ -2
CLCF1Q9UBD9 BNIP3P40-201ENST00000596017 556 ntBASIC2.58□□□□□ -2
CLCF1Q9UBD9 BBIP1P1-201ENST00000602999 279 ntBASIC2.58□□□□□ -2
CLCF1Q9UBD9 AC013444.2-201ENST00000603317 787 ntBASIC2.58□□□□□ -2
CLCF1Q9UBD9 AC106900.2-201ENST00000604994 317 ntBASIC2.58□□□□□ -2
CLCF1Q9UBD9 AC097478.2-201ENST00000610572 514 ntBASIC2.58□□□□□ -2
CLCF1Q9UBD9 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
CLCF1Q9UBD9 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC2.58□□□□□ -2
CLCF1Q9UBD9 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC2.58□□□□□ -2
CLCF1Q9UBD9 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.58□□□□□ -2
CLCF1Q9UBD9 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CLCF1Q9UBD9 AL513185.3-201ENST00000433335 1300 ntBASIC2.58□□□□□ -2
CLCF1Q9UBD9 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CLCF1Q9UBD9 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.57□□□□□ -2
CLCF1Q9UBD9 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC2.57□□□□□ -2
CLCF1Q9UBD9 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CLCF1Q9UBD9 OR5J1P-201ENST00000313544 939 ntBASIC2.57□□□□□ -2
CLCF1Q9UBD9 SNORA5B-201ENST00000363786 132 ntBASIC2.57□□□□□ -2
CLCF1Q9UBD9 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC2.57□□□□□ -2
CLCF1Q9UBD9 RNU6-1242P-201ENST00000391052 103 ntBASIC2.57□□□□□ -2
CLCF1Q9UBD9 RN7SKP58-201ENST00000411010 305 ntBASIC2.57□□□□□ -2
CLCF1Q9UBD9 USP9YP33-201ENST00000412220 421 ntBASIC2.57□□□□□ -2
CLCF1Q9UBD9 AC109780.2-201ENST00000413467 845 ntBASIC2.57□□□□□ -2
CLCF1Q9UBD9 SSXP9-201ENST00000417503 292 ntBASIC2.57□□□□□ -2
CLCF1Q9UBD9 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC2.57□□□□□ -2
CLCF1Q9UBD9 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC2.57□□□□□ -2
CLCF1Q9UBD9 UBE2D3P2-201ENST00000424409 445 ntBASIC2.57□□□□□ -2
CLCF1Q9UBD9 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.57□□□□□ -2
CLCF1Q9UBD9 RPL7P46-201ENST00000425129 740 ntBASIC2.57□□□□□ -2
CLCF1Q9UBD9 AC244505.4-201ENST00000434905 287 ntBASIC2.57□□□□□ -2
CLCF1Q9UBD9 USP9YP35-201ENST00000435696 412 ntBASIC2.57□□□□□ -2
CLCF1Q9UBD9 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.57□□□□□ -2
CLCF1Q9UBD9 COX7BP2-201ENST00000437976 242 ntBASIC2.57□□□□□ -2
CLCF1Q9UBD9 RPS24P13-201ENST00000442520 397 ntBASIC2.57□□□□□ -2
CLCF1Q9UBD9 SSXP5-201ENST00000443473 287 ntBASIC2.57□□□□□ -2
CLCF1Q9UBD9 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.57□□□□□ -2
CLCF1Q9UBD9 UQCRHP3-201ENST00000451503 251 ntBASIC2.57□□□□□ -2
CLCF1Q9UBD9 ARPC3P2-201ENST00000457786 533 ntBASIC2.57□□□□□ -2
CLCF1Q9UBD9 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC2.57□□□□□ -2
CLCF1Q9UBD9 AC010587.2-201ENST00000511727 448 ntBASIC2.57□□□□□ -2
CLCF1Q9UBD9 AC022483.1-201ENST00000514020 567 ntBASIC2.57□□□□□ -2
CLCF1Q9UBD9 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC2.57□□□□□ -2
CLCF1Q9UBD9 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
CLCF1Q9UBD9 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.57□□□□□ -2
CLCF1Q9UBD9 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.57□□□□□ -2
CLCF1Q9UBD9 OR6C7P-201ENST00000547875 934 ntBASIC2.57□□□□□ -2
CLCF1Q9UBD9 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC2.57□□□□□ -2
CLCF1Q9UBD9 GTF3AP2-201ENST00000557014 266 ntBASIC2.57□□□□□ -2
CLCF1Q9UBD9 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.57□□□□□ -2
CLCF1Q9UBD9 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC2.57□□□□□ -2
CLCF1Q9UBD9 ELOCP29-201ENST00000588193 334 ntBASIC2.57□□□□□ -2
CLCF1Q9UBD9 AP002826.1-201ENST00000608835 315 ntBASIC2.57□□□□□ -2
CLCF1Q9UBD9 AC009974.1-201ENST00000608881 455 ntBASIC2.57□□□□□ -2
CLCF1Q9UBD9 AL590099.1-201ENST00000615276 138 ntBASIC2.57□□□□□ -2
CLCF1Q9UBD9 AC068831.7-201ENST00000616954 363 ntBASIC2.57□□□□□ -2
CLCF1Q9UBD9 AC006386.1-201ENST00000619436 415 ntBASIC2.57□□□□□ -2
CLCF1Q9UBD9 AC011330.2-201ENST00000621680 635 ntBASIC2.57□□□□□ -2
CLCF1Q9UBD9 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.57□□□□□ -2
CLCF1Q9UBD9 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.57□□□□□ -2
CLCF1Q9UBD9 DDX43P2-201ENST00000604753 1354 ntBASIC2.57□□□□□ -2
CLCF1Q9UBD9 AC090740.1-201ENST00000623193 2262 ntBASIC2.57□□□□□ -2
CLCF1Q9UBD9 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.57□□□□□ -2
CLCF1Q9UBD9 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.57□□□□□ -2
CLCF1Q9UBD9 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.57□□□□□ -2
CLCF1Q9UBD9 AC009812.4-201ENST00000569134 1805 ntBASIC2.56□□□□□ -2
CLCF1Q9UBD9 AC008264.2-201ENST00000610193 3731 ntBASIC2.56□□□□□ -2
CLCF1Q9UBD9 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.56□□□□□ -2
CLCF1Q9UBD9 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.56□□□□□ -2
CLCF1Q9UBD9 BMS1P22-201ENST00000414726 313 ntBASIC2.56□□□□□ -2
CLCF1Q9UBD9 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC2.56□□□□□ -2
CLCF1Q9UBD9 MTCYBP38-201ENST00000417160 1123 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms