Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 RPL31P41-201ENST00000477967 372 ntBASIC2.35□□□□□ -2.03
VAPAQ9P0L0 RPS15AP34-201ENST00000487776 387 ntBASIC2.35□□□□□ -2.03
VAPAQ9P0L0 KLRA1P-201ENST00000503499 986 ntBASIC2.35□□□□□ -2.03
VAPAQ9P0L0 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.35□□□□□ -2.03
VAPAQ9P0L0 AC034159.1-201ENST00000513885 583 ntBASIC2.35□□□□□ -2.03
VAPAQ9P0L0 RN7SKP132-201ENST00000516001 208 ntBASIC2.35□□□□□ -2.03
VAPAQ9P0L0 AC027309.2-201ENST00000520566 192 ntBASIC2.35□□□□□ -2.03
VAPAQ9P0L0 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
VAPAQ9P0L0 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
VAPAQ9P0L0 AMZ2P1-203ENST00000565833 850 ntBASIC2.35□□□□□ -2.03
VAPAQ9P0L0 HMGB1P6-201ENST00000569046 646 ntBASIC2.35□□□□□ -2.03
VAPAQ9P0L0 AC007336.1-201ENST00000576365 3828 ntBASIC2.35□□□□□ -2.03
VAPAQ9P0L0 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
VAPAQ9P0L0 AC024220.1-201ENST00000603675 484 ntBASIC2.35□□□□□ -2.03
VAPAQ9P0L0 AL645944.1-201ENST00000603857 493 ntBASIC2.35□□□□□ -2.03
VAPAQ9P0L0 DUXAP11-201ENST00000603858 526 ntBASIC2.35□□□□□ -2.03
VAPAQ9P0L0 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC2.35□□□□□ -2.03
VAPAQ9P0L0 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC2.35□□□□□ -2.03
VAPAQ9P0L0 AC004852.3-201ENST00000614131 326 ntBASIC2.35□□□□□ -2.03
VAPAQ9P0L0 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
VAPAQ9P0L0 AC004777.1-201ENST00000624317 287 ntBASIC2.35□□□□□ -2.03
VAPAQ9P0L0 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.35□□□□□ -2.03
VAPAQ9P0L0 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.35□□□□□ -2.03
VAPAQ9P0L0 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.35□□□□□ -2.03
VAPAQ9P0L0 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.35□□□□□ -2.03
VAPAQ9P0L0 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.35□□□□□ -2.03
VAPAQ9P0L0 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.35□□□□□ -2.03
VAPAQ9P0L0 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
VAPAQ9P0L0 MTCO1P4-201ENST00000520516 1409 ntBASIC2.34□□□□□ -2.03
VAPAQ9P0L0 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
VAPAQ9P0L0 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
VAPAQ9P0L0 SNORA9-201ENST00000384215 133 ntBASIC2.34□□□□□ -2.03
VAPAQ9P0L0 MIR767-201ENST00000390228 109 ntBASIC2.34□□□□□ -2.03
VAPAQ9P0L0 RNU6-1300P-201ENST00000391046 108 ntBASIC2.34□□□□□ -2.03
VAPAQ9P0L0 AL356131.1-201ENST00000405826 414 ntBASIC2.34□□□□□ -2.03
VAPAQ9P0L0 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
VAPAQ9P0L0 RPS4XP7-201ENST00000406274 780 ntBASIC2.34□□□□□ -2.03
VAPAQ9P0L0 AC098826.1-201ENST00000433943 471 ntBASIC2.34□□□□□ -2.03
VAPAQ9P0L0 MTND4P15-201ENST00000437913 1033 ntBASIC2.34□□□□□ -2.03
VAPAQ9P0L0 AC000041.1-201ENST00000439655 175 ntBASIC2.34□□□□□ -2.03
VAPAQ9P0L0 WASF1P1-201ENST00000447560 1131 ntBASIC2.34□□□□□ -2.03
VAPAQ9P0L0 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.34□□□□□ -2.03
VAPAQ9P0L0 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
VAPAQ9P0L0 TTC39CP1-201ENST00000512513 755 ntBASIC2.34□□□□□ -2.03
VAPAQ9P0L0 RNA5SP82-201ENST00000516707 92 ntBASIC2.34□□□□□ -2.03
VAPAQ9P0L0 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.34□□□□□ -2.03
VAPAQ9P0L0 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC2.34□□□□□ -2.03
VAPAQ9P0L0 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
VAPAQ9P0L0 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
VAPAQ9P0L0 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.34□□□□□ -2.03
VAPAQ9P0L0 MIR1254-2-201ENST00000579553 63 ntBASIC2.34□□□□□ -2.03
VAPAQ9P0L0 OR1M4P-201ENST00000589199 287 ntBASIC2.34□□□□□ -2.03
VAPAQ9P0L0 AC104237.2-201ENST00000612456 443 ntBASIC2.34□□□□□ -2.03
VAPAQ9P0L0 AC090132.2-201ENST00000615881 347 ntBASIC2.34□□□□□ -2.03
VAPAQ9P0L0 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.34□□□□□ -2.03
VAPAQ9P0L0 AC004009.2-201ENST00000623016 728 ntBASIC2.34□□□□□ -2.03
VAPAQ9P0L0 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.34□□□□□ -2.03
VAPAQ9P0L0 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.34□□□□□ -2.03
VAPAQ9P0L0 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.34□□□□□ -2.04
VAPAQ9P0L0 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
VAPAQ9P0L0 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
VAPAQ9P0L0 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
VAPAQ9P0L0 PABPC1P9-201ENST00000426076 1612 ntBASIC2.33□□□□□ -2.04
VAPAQ9P0L0 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.33□□□□□ -2.04
VAPAQ9P0L0 MIR21-201ENST00000362134 72 ntBASIC2.33□□□□□ -2.04
VAPAQ9P0L0 SNORA67.1-201ENST00000364749 141 ntBASIC2.33□□□□□ -2.04
VAPAQ9P0L0 SUGT1P1-201ENST00000379514 476 ntBASIC2.33□□□□□ -2.04
VAPAQ9P0L0 RNU6-354P-201ENST00000383862 107 ntBASIC2.33□□□□□ -2.04
VAPAQ9P0L0 RNU6-610P-201ENST00000384264 107 ntBASIC2.33□□□□□ -2.04
VAPAQ9P0L0 RNU6-1035P-201ENST00000384477 107 ntBASIC2.33□□□□□ -2.04
VAPAQ9P0L0 MIR144-201ENST00000384886 86 ntBASIC2.33□□□□□ -2.04
VAPAQ9P0L0 SNRPEP2-201ENST00000397592 279 ntBASIC2.33□□□□□ -2.04
VAPAQ9P0L0 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.33□□□□□ -2.04
VAPAQ9P0L0 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.33□□□□□ -2.04
VAPAQ9P0L0 BLOC1S2P1-201ENST00000428431 301 ntBASIC2.33□□□□□ -2.04
VAPAQ9P0L0 FO393414.1-201ENST00000428697 1184 ntBASIC2.33□□□□□ -2.04
VAPAQ9P0L0 RPL17P35-201ENST00000432217 549 ntBASIC2.33□□□□□ -2.04
VAPAQ9P0L0 MTND2P5-201ENST00000432656 1006 ntBASIC2.33□□□□□ -2.04
VAPAQ9P0L0 AL512844.2-201ENST00000433990 593 ntBASIC2.33□□□□□ -2.04
VAPAQ9P0L0 TAAR7P-201ENST00000436141 242 ntBASIC2.33□□□□□ -2.04
VAPAQ9P0L0 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.33□□□□□ -2.04
VAPAQ9P0L0 AL714022.1-201ENST00000439897 151 ntBASIC2.33□□□□□ -2.04
VAPAQ9P0L0 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC2.33□□□□□ -2.04
VAPAQ9P0L0 AL353691.1-201ENST00000451332 387 ntBASIC2.33□□□□□ -2.04
VAPAQ9P0L0 SUMO2P2-201ENST00000456482 255 ntBASIC2.33□□□□□ -2.04
VAPAQ9P0L0 AC116337.2-201ENST00000477662 156 ntBASIC2.33□□□□□ -2.04
VAPAQ9P0L0 AL135752.1-201ENST00000479477 471 ntBASIC2.33□□□□□ -2.04
VAPAQ9P0L0 AL049874.1-201ENST00000489560 388 ntBASIC2.33□□□□□ -2.04
VAPAQ9P0L0 AC135721.1-201ENST00000497954 479 ntBASIC2.33□□□□□ -2.04
VAPAQ9P0L0 NAMPTP2-201ENST00000505629 1115 ntBASIC2.33□□□□□ -2.04
VAPAQ9P0L0 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC2.33□□□□□ -2.04
VAPAQ9P0L0 AC022483.1-201ENST00000514020 567 ntBASIC2.33□□□□□ -2.04
VAPAQ9P0L0 AC096725.1-201ENST00000514266 313 ntBASIC2.33□□□□□ -2.04
VAPAQ9P0L0 SNORA31.11-201ENST00000516528 139 ntBASIC2.33□□□□□ -2.04
VAPAQ9P0L0 AP003467.2-201ENST00000520175 319 ntBASIC2.33□□□□□ -2.04
VAPAQ9P0L0 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.33□□□□□ -2.04
VAPAQ9P0L0 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC2.33□□□□□ -2.04
VAPAQ9P0L0 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.33□□□□□ -2.04
VAPAQ9P0L0 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.33□□□□□ -2.04
VAPAQ9P0L0 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms