Protein–RNA interactions for Protein: Q9NY93

DDX56, Probable ATP-dependent RNA helicase DDX56, humanhuman

Known RBP Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56Q9NY93 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.39□□□□□ -1.71
DDX56Q9NY93 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC4.39□□□□□ -1.71
DDX56Q9NY93 RNU1-14P-201ENST00000362759 152 ntBASIC4.39□□□□□ -1.71
DDX56Q9NY93 RNA5SP332-201ENST00000391063 115 ntBASIC4.39□□□□□ -1.71
DDX56Q9NY93 RNA5SP36-201ENST00000410197 133 ntBASIC4.39□□□□□ -1.71
DDX56Q9NY93 RNU2-33P-201ENST00000410344 192 ntBASIC4.39□□□□□ -1.71
DDX56Q9NY93 AC004552.1-201ENST00000419089 348 ntBASIC4.39□□□□□ -1.71
DDX56Q9NY93 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC4.39□□□□□ -1.71
DDX56Q9NY93 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC4.39□□□□□ -1.71
DDX56Q9NY93 DPPA2P1-201ENST00000428060 556 ntBASIC4.39□□□□□ -1.71
DDX56Q9NY93 AC007919.1-201ENST00000429380 217 ntBASIC4.39□□□□□ -1.71
DDX56Q9NY93 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC4.39□□□□□ -1.71
DDX56Q9NY93 AC092573.2-201ENST00000434546 243 ntBASIC4.39□□□□□ -1.71
DDX56Q9NY93 AC002486.1-201ENST00000435098 391 ntBASIC4.39□□□□□ -1.71
DDX56Q9NY93 Z74696.2-201ENST00000436514 498 ntBASIC4.39□□□□□ -1.71
DDX56Q9NY93 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.39□□□□□ -1.71
DDX56Q9NY93 MTATP6P30-201ENST00000443540 664 ntBASIC4.39□□□□□ -1.71
DDX56Q9NY93 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC4.39□□□□□ -1.71
DDX56Q9NY93 SSXP4-201ENST00000451349 245 ntBASIC4.39□□□□□ -1.71
DDX56Q9NY93 RPS26P3-201ENST00000470205 348 ntBASIC4.39□□□□□ -1.71
DDX56Q9NY93 AC126389.1-201ENST00000477436 290 ntBASIC4.39□□□□□ -1.71
DDX56Q9NY93 AC090543.2-201ENST00000483963 348 ntBASIC4.39□□□□□ -1.71
DDX56Q9NY93 AC004057.1-201ENST00000485827 348 ntBASIC4.39□□□□□ -1.71
DDX56Q9NY93 RPL35P6-201ENST00000490024 372 ntBASIC4.39□□□□□ -1.71
DDX56Q9NY93 AC026427.2-201ENST00000506228 536 ntBASIC4.39□□□□□ -1.71
DDX56Q9NY93 RPL37P25-201ENST00000507308 276 ntBASIC4.39□□□□□ -1.71
DDX56Q9NY93 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC4.39□□□□□ -1.71
DDX56Q9NY93 SNORA31.3-201ENST00000516029 96 ntBASIC4.39□□□□□ -1.71
DDX56Q9NY93 RNU6-677P-201ENST00000516914 101 ntBASIC4.39□□□□□ -1.71
DDX56Q9NY93 RNU6-1220P-201ENST00000517126 108 ntBASIC4.39□□□□□ -1.71
DDX56Q9NY93 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC4.39□□□□□ -1.71
DDX56Q9NY93 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.39□□□□□ -1.71
DDX56Q9NY93 OR4R1P-201ENST00000529879 463 ntBASIC4.39□□□□□ -1.71
DDX56Q9NY93 ZDHHC20P3-201ENST00000531576 336 ntBASIC4.39□□□□□ -1.71
DDX56Q9NY93 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC4.39□□□□□ -1.71
DDX56Q9NY93 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC4.39□□□□□ -1.71
DDX56Q9NY93 SUB1P2-201ENST00000556401 297 ntBASIC4.39□□□□□ -1.71
DDX56Q9NY93 TRAV28-201ENST00000557548 323 ntBASIC4.39□□□□□ -1.71
DDX56Q9NY93 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.39□□□□□ -1.71
DDX56Q9NY93 EIF1P4-201ENST00000572664 335 ntBASIC4.39□□□□□ -1.71
DDX56Q9NY93 AC008962.1-201ENST00000605729 304 ntBASIC4.39□□□□□ -1.71
DDX56Q9NY93 AC103710.3-201ENST00000608157 948 ntBASIC4.39□□□□□ -1.71
DDX56Q9NY93 AC107294.1-201ENST00000609524 467 ntBASIC4.39□□□□□ -1.71
DDX56Q9NY93 AC007684.1-201ENST00000609671 477 ntBASIC4.39□□□□□ -1.71
DDX56Q9NY93 AL365204.3-201ENST00000612448 685 ntBASIC4.39□□□□□ -1.71
DDX56Q9NY93 MIR7703-201ENST00000620784 77 ntBASIC4.39□□□□□ -1.71
DDX56Q9NY93 AL445363.3-201ENST00000623080 671 ntBASIC4.39□□□□□ -1.71
DDX56Q9NY93 AC027309.3-201ENST00000623419 351 ntBASIC4.39□□□□□ -1.71
DDX56Q9NY93 AP005264.7-201ENST00000625003 745 ntBASIC4.39□□□□□ -1.71
DDX56Q9NY93 AC099654.12-201ENST00000639868 649 ntBASIC4.39□□□□□ -1.71
DDX56Q9NY93 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
DDX56Q9NY93 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC4.39□□□□□ -1.71
DDX56Q9NY93 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.39□□□□□ -1.71
DDX56Q9NY93 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.39□□□□□ -1.71
DDX56Q9NY93 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
DDX56Q9NY93 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
DDX56Q9NY93 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
DDX56Q9NY93 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
DDX56Q9NY93 AC016588.2-201ENST00000632484 3021 ntBASIC4.38□□□□□ -1.71
DDX56Q9NY93 BDP1P-201ENST00000582658 1990 ntBASIC4.38□□□□□ -1.71
DDX56Q9NY93 RPL7P26-201ENST00000333817 754 ntBASIC4.38□□□□□ -1.71
DDX56Q9NY93 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
DDX56Q9NY93 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.38□□□□□ -1.71
DDX56Q9NY93 RN7SKP226-201ENST00000364912 300 ntBASIC4.38□□□□□ -1.71
DDX56Q9NY93 RNU6-282P-201ENST00000365357 103 ntBASIC4.38□□□□□ -1.71
DDX56Q9NY93 RNU6-398P-201ENST00000384143 109 ntBASIC4.38□□□□□ -1.71
DDX56Q9NY93 Y_RNA.619-201ENST00000410951 90 ntBASIC4.38□□□□□ -1.71
DDX56Q9NY93 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.38□□□□□ -1.71
DDX56Q9NY93 AF274854.1-201ENST00000413236 615 ntBASIC4.38□□□□□ -1.71
DDX56Q9NY93 Z85995.1-201ENST00000415547 335 ntBASIC4.38□□□□□ -1.71
DDX56Q9NY93 AC091390.3-201ENST00000426478 338 ntBASIC4.38□□□□□ -1.71
DDX56Q9NY93 RPL23AP46-201ENST00000438548 490 ntBASIC4.38□□□□□ -1.71
DDX56Q9NY93 Z82210.1-201ENST00000440037 231 ntBASIC4.38□□□□□ -1.71
DDX56Q9NY93 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC4.38□□□□□ -1.71
DDX56Q9NY93 AL353748.1-201ENST00000440753 474 ntBASIC4.38□□□□□ -1.71
DDX56Q9NY93 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.38□□□□□ -1.71
DDX56Q9NY93 AL590664.1-201ENST00000448065 339 ntBASIC4.38□□□□□ -1.71
DDX56Q9NY93 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.38□□□□□ -1.71
DDX56Q9NY93 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC4.38□□□□□ -1.71
DDX56Q9NY93 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC4.38□□□□□ -1.71
DDX56Q9NY93 RPL30P14-201ENST00000482744 348 ntBASIC4.38□□□□□ -1.71
DDX56Q9NY93 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC4.38□□□□□ -1.71
DDX56Q9NY93 MTND4LP31-201ENST00000514859 294 ntBASIC4.38□□□□□ -1.71
DDX56Q9NY93 RN7SKP60-201ENST00000516985 239 ntBASIC4.38□□□□□ -1.71
DDX56Q9NY93 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC4.38□□□□□ -1.71
DDX56Q9NY93 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.38□□□□□ -1.71
DDX56Q9NY93 AC007448.1-201ENST00000582714 234 ntBASIC4.38□□□□□ -1.71
DDX56Q9NY93 AC067852.3-201ENST00000589177 561 ntBASIC4.38□□□□□ -1.71
DDX56Q9NY93 AC008638.3-201ENST00000603341 463 ntBASIC4.38□□□□□ -1.71
DDX56Q9NY93 AC025946.2-201ENST00000603398 234 ntBASIC4.38□□□□□ -1.71
DDX56Q9NY93 Z84480.1-201ENST00000605131 311 ntBASIC4.38□□□□□ -1.71
DDX56Q9NY93 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC4.38□□□□□ -1.71
DDX56Q9NY93 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.38□□□□□ -1.71
DDX56Q9NY93 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.38□□□□□ -1.71
DDX56Q9NY93 AC068831.7-201ENST00000616954 363 ntBASIC4.38□□□□□ -1.71
DDX56Q9NY93 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
DDX56Q9NY93 AC091905.1-201ENST00000624400 311 ntBASIC4.38□□□□□ -1.71
DDX56Q9NY93 AL158163.1-201ENST00000603915 1649 ntBASIC4.38□□□□□ -1.71
DDX56Q9NY93 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
DDX56Q9NY93 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 210.8 ms