Protein–RNA interactions for Protein: Q9NXS3

KLHL28, Kelch-like protein 28, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL28Q9NXS3 AC114981.1-201ENST00000503897 678 ntBASIC2.73□□□□□ -1.97
KLHL28Q9NXS3 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.73□□□□□ -1.97
KLHL28Q9NXS3 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC2.73□□□□□ -1.97
KLHL28Q9NXS3 AC017037.2-201ENST00000513850 890 ntBASIC2.73□□□□□ -1.97
KLHL28Q9NXS3 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.73□□□□□ -1.97
KLHL28Q9NXS3 RNU6-1225P-201ENST00000516336 65 ntBASIC2.73□□□□□ -1.97
KLHL28Q9NXS3 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC2.73□□□□□ -1.97
KLHL28Q9NXS3 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
KLHL28Q9NXS3 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
KLHL28Q9NXS3 HMGB1P14-201ENST00000557424 591 ntBASIC2.73□□□□□ -1.97
KLHL28Q9NXS3 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.73□□□□□ -1.97
KLHL28Q9NXS3 H3F3AP1-201ENST00000559984 334 ntBASIC2.73□□□□□ -1.97
KLHL28Q9NXS3 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC2.73□□□□□ -1.97
KLHL28Q9NXS3 ACTR3BP3-201ENST00000565577 979 ntBASIC2.73□□□□□ -1.97
KLHL28Q9NXS3 AC103810.1-201ENST00000579873 453 ntBASIC2.73□□□□□ -1.97
KLHL28Q9NXS3 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC2.73□□□□□ -1.97
KLHL28Q9NXS3 AC083760.1-201ENST00000589621 670 ntBASIC2.73□□□□□ -1.97
KLHL28Q9NXS3 BNIP3P11-201ENST00000603878 563 ntBASIC2.73□□□□□ -1.97
KLHL28Q9NXS3 AC093673.2-201ENST00000609674 331 ntBASIC2.73□□□□□ -1.97
KLHL28Q9NXS3 AC243773.3-201ENST00000613270 256 ntBASIC2.73□□□□□ -1.97
KLHL28Q9NXS3 AC023158.2-201ENST00000614876 543 ntBASIC2.73□□□□□ -1.97
KLHL28Q9NXS3 MIR6852-201ENST00000621699 66 ntBASIC2.73□□□□□ -1.97
KLHL28Q9NXS3 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.73□□□□□ -1.97
KLHL28Q9NXS3 Z82195.2-201ENST00000612348 18351 ntBASIC2.73□□□□□ -1.97
KLHL28Q9NXS3 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.73□□□□□ -1.97
KLHL28Q9NXS3 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
KLHL28Q9NXS3 AL035425.3-201ENST00000564206 4996 ntBASIC2.73□□□□□ -1.97
KLHL28Q9NXS3 MAPK10-266ENST00000641066 6555 ntBASIC2.72□□□□□ -1.97
KLHL28Q9NXS3 SNORA80A-201ENST00000363922 136 ntBASIC2.72□□□□□ -1.97
KLHL28Q9NXS3 RNU2-25P-201ENST00000411041 191 ntBASIC2.72□□□□□ -1.97
KLHL28Q9NXS3 AC096533.1-201ENST00000411645 353 ntBASIC2.72□□□□□ -1.97
KLHL28Q9NXS3 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.72□□□□□ -1.97
KLHL28Q9NXS3 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.72□□□□□ -1.97
KLHL28Q9NXS3 AC009296.1-201ENST00000443146 155 ntBASIC2.72□□□□□ -1.97
KLHL28Q9NXS3 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.72□□□□□ -1.97
KLHL28Q9NXS3 RPL23AP20-201ENST00000447965 421 ntBASIC2.72□□□□□ -1.97
KLHL28Q9NXS3 AL162389.1-201ENST00000449233 177 ntBASIC2.72□□□□□ -1.97
KLHL28Q9NXS3 RPL21P41-201ENST00000459863 264 ntBASIC2.72□□□□□ -1.97
KLHL28Q9NXS3 RPL23AP70-201ENST00000483361 460 ntBASIC2.72□□□□□ -1.97
KLHL28Q9NXS3 AC147055.4-201ENST00000504399 745 ntBASIC2.72□□□□□ -1.97
KLHL28Q9NXS3 AC118282.1-201ENST00000506408 765 ntBASIC2.72□□□□□ -1.97
KLHL28Q9NXS3 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC2.72□□□□□ -1.97
KLHL28Q9NXS3 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
KLHL28Q9NXS3 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC2.72□□□□□ -1.97
KLHL28Q9NXS3 SLC2A13P1-201ENST00000531560 322 ntBASIC2.72□□□□□ -1.97
KLHL28Q9NXS3 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.72□□□□□ -1.97
KLHL28Q9NXS3 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
KLHL28Q9NXS3 AC138761.3-201ENST00000579993 334 ntBASIC2.72□□□□□ -1.97
KLHL28Q9NXS3 AC006504.3-201ENST00000586818 523 ntBASIC2.72□□□□□ -1.97
KLHL28Q9NXS3 AC093732.2-201ENST00000607950 274 ntBASIC2.72□□□□□ -1.97
KLHL28Q9NXS3 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.72□□□□□ -1.97
KLHL28Q9NXS3 AL020991.1-201ENST00000612314 373 ntBASIC2.72□□□□□ -1.97
KLHL28Q9NXS3 MIR7106-201ENST00000612419 65 ntBASIC2.72□□□□□ -1.97
KLHL28Q9NXS3 AL450472.3-201ENST00000615578 367 ntBASIC2.72□□□□□ -1.97
KLHL28Q9NXS3 AC090132.2-201ENST00000615881 347 ntBASIC2.72□□□□□ -1.97
KLHL28Q9NXS3 AC006213.4-201ENST00000616184 634 ntBASIC2.72□□□□□ -1.97
KLHL28Q9NXS3 AC140725.3-201ENST00000616193 880 ntBASIC2.72□□□□□ -1.97
KLHL28Q9NXS3 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
KLHL28Q9NXS3 AC103798.2-201ENST00000624292 632 ntBASIC2.72□□□□□ -1.97
KLHL28Q9NXS3 AC009039.2-201ENST00000624524 529 ntBASIC2.72□□□□□ -1.97
KLHL28Q9NXS3 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.72□□□□□ -1.97
KLHL28Q9NXS3 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
KLHL28Q9NXS3 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC2.72□□□□□ -1.97
KLHL28Q9NXS3 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
KLHL28Q9NXS3 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.72□□□□□ -1.97
KLHL28Q9NXS3 ZNF519P1-201ENST00000449011 1626 ntBASIC2.71□□□□□ -1.97
KLHL28Q9NXS3 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC2.71□□□□□ -1.98
KLHL28Q9NXS3 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.71□□□□□ -1.98
KLHL28Q9NXS3 AL356473.1-201ENST00000406203 1408 ntBASIC2.71□□□□□ -1.98
KLHL28Q9NXS3 RPL9P7-201ENST00000330965 580 ntBASIC2.71□□□□□ -1.98
KLHL28Q9NXS3 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
KLHL28Q9NXS3 NACA3P-201ENST00000359690 648 ntBASIC2.71□□□□□ -1.98
KLHL28Q9NXS3 VTRNA1-1-201ENST00000363120 99 ntBASIC2.71□□□□□ -1.98
KLHL28Q9NXS3 RNU1-105P-201ENST00000363470 161 ntBASIC2.71□□□□□ -1.98
KLHL28Q9NXS3 snoZ40.1-201ENST00000364540 72 ntBASIC2.71□□□□□ -1.98
KLHL28Q9NXS3 RNU6-76P-201ENST00000384060 104 ntBASIC2.71□□□□□ -1.98
KLHL28Q9NXS3 SNORA40.4-201ENST00000390971 128 ntBASIC2.71□□□□□ -1.98
KLHL28Q9NXS3 HMGB1P17-201ENST00000403495 628 ntBASIC2.71□□□□□ -1.98
KLHL28Q9NXS3 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC2.71□□□□□ -1.98
KLHL28Q9NXS3 SNORD88.1-201ENST00000408684 91 ntBASIC2.71□□□□□ -1.98
KLHL28Q9NXS3 RNU6-193P-201ENST00000410977 107 ntBASIC2.71□□□□□ -1.98
KLHL28Q9NXS3 AC069282.1-201ENST00000411911 526 ntBASIC2.71□□□□□ -1.98
KLHL28Q9NXS3 MTCO2P5-201ENST00000422621 426 ntBASIC2.71□□□□□ -1.98
KLHL28Q9NXS3 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC2.71□□□□□ -1.98
KLHL28Q9NXS3 AC090774.1-201ENST00000435925 246 ntBASIC2.71□□□□□ -1.98
KLHL28Q9NXS3 SDCBPP1-201ENST00000440192 890 ntBASIC2.71□□□□□ -1.98
KLHL28Q9NXS3 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC2.71□□□□□ -1.98
KLHL28Q9NXS3 AC117440.1-201ENST00000474107 571 ntBASIC2.71□□□□□ -1.98
KLHL28Q9NXS3 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.71□□□□□ -1.98
KLHL28Q9NXS3 AC097462.2-201ENST00000504623 481 ntBASIC2.71□□□□□ -1.98
KLHL28Q9NXS3 AC069306.1-201ENST00000507006 843 ntBASIC2.71□□□□□ -1.98
KLHL28Q9NXS3 OR5BM1P-201ENST00000512021 366 ntBASIC2.71□□□□□ -1.98
KLHL28Q9NXS3 RPPH1-2P-201ENST00000516688 293 ntBASIC2.71□□□□□ -1.98
KLHL28Q9NXS3 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.71□□□□□ -1.98
KLHL28Q9NXS3 ANKRD36BP2-206ENST00000575193 1245 ntBASIC2.71□□□□□ -1.98
KLHL28Q9NXS3 AC079597.1-201ENST00000624306 508 ntBASIC2.71□□□□□ -1.98
KLHL28Q9NXS3 PAPPA-AS1-201ENST00000445861 2450 ntBASIC2.71□□□□□ -1.98
KLHL28Q9NXS3 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.71□□□□□ -1.98
KLHL28Q9NXS3 AC092447.7-201ENST00000422212 1621 ntBASIC2.71□□□□□ -1.98
KLHL28Q9NXS3 AC000403.1-201ENST00000613696 3585 ntBASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms