Protein–RNA interactions for Protein: Q9NT62

ATG3, Ubiquitin-like-conjugating enzyme ATG3, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3Q9NT62 AP004289.2-201ENST00000444413 1457 ntBASIC5.58□□□□□ -1.52
ATG3Q9NT62 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
ATG3Q9NT62 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
ATG3Q9NT62 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
ATG3Q9NT62 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
ATG3Q9NT62 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
ATG3Q9NT62 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
ATG3Q9NT62 RNU6-1097P-201ENST00000363586 107 ntBASIC5.58□□□□□ -1.52
ATG3Q9NT62 Y_RNA.158-201ENST00000363651 101 ntBASIC5.58□□□□□ -1.52
ATG3Q9NT62 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
ATG3Q9NT62 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC5.58□□□□□ -1.52
ATG3Q9NT62 MIR23A-201ENST00000385245 73 ntBASIC5.58□□□□□ -1.52
ATG3Q9NT62 DHFRP6-201ENST00000401776 268 ntBASIC5.58□□□□□ -1.52
ATG3Q9NT62 MIR548F5-201ENST00000408421 86 ntBASIC5.58□□□□□ -1.52
ATG3Q9NT62 RNU6-370P-201ENST00000411008 104 ntBASIC5.58□□□□□ -1.52
ATG3Q9NT62 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
ATG3Q9NT62 CYCSP10-201ENST00000417973 294 ntBASIC5.58□□□□□ -1.52
ATG3Q9NT62 Z74021.1-201ENST00000423610 407 ntBASIC5.58□□□□□ -1.52
ATG3Q9NT62 MTCYBP10-201ENST00000424905 650 ntBASIC5.58□□□□□ -1.52
ATG3Q9NT62 RPS26P40-201ENST00000435209 294 ntBASIC5.58□□□□□ -1.52
ATG3Q9NT62 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC5.58□□□□□ -1.52
ATG3Q9NT62 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC5.58□□□□□ -1.52
ATG3Q9NT62 AL031584.1-201ENST00000447169 754 ntBASIC5.58□□□□□ -1.52
ATG3Q9NT62 AL356010.1-201ENST00000456364 102 ntBASIC5.58□□□□□ -1.52
ATG3Q9NT62 TMEM251P1-201ENST00000503717 318 ntBASIC5.58□□□□□ -1.52
ATG3Q9NT62 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
ATG3Q9NT62 Y_RNA.682-201ENST00000516457 100 ntBASIC5.58□□□□□ -1.52
ATG3Q9NT62 RNA5SP143-201ENST00000516936 115 ntBASIC5.58□□□□□ -1.52
ATG3Q9NT62 HMGB1P19-201ENST00000517578 577 ntBASIC5.58□□□□□ -1.52
ATG3Q9NT62 OR4R1P-201ENST00000529879 463 ntBASIC5.58□□□□□ -1.52
ATG3Q9NT62 MYL12BP1-201ENST00000569826 507 ntBASIC5.58□□□□□ -1.52
ATG3Q9NT62 MIR4286-201ENST00000580651 93 ntBASIC5.58□□□□□ -1.52
ATG3Q9NT62 AP001029.3-201ENST00000588063 596 ntBASIC5.58□□□□□ -1.52
ATG3Q9NT62 OR10AB1P-201ENST00000609613 938 ntBASIC5.58□□□□□ -1.52
ATG3Q9NT62 AC007546.1-201ENST00000619452 559 ntBASIC5.58□□□□□ -1.52
ATG3Q9NT62 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
ATG3Q9NT62 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.58□□□□□ -1.52
ATG3Q9NT62 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
ATG3Q9NT62 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
ATG3Q9NT62 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC5.58□□□□□ -1.52
ATG3Q9NT62 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
ATG3Q9NT62 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
ATG3Q9NT62 AC090971.4-201ENST00000560291 1800 ntBASIC5.58□□□□□ -1.52
ATG3Q9NT62 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
ATG3Q9NT62 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
ATG3Q9NT62 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
ATG3Q9NT62 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
ATG3Q9NT62 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
ATG3Q9NT62 RNA5SP175-201ENST00000364275 119 ntBASIC5.57□□□□□ -1.52
ATG3Q9NT62 RNU6-343P-201ENST00000364709 104 ntBASIC5.57□□□□□ -1.52
ATG3Q9NT62 SET-203ENST00000372688 801 ntTSL 2 BASIC5.57□□□□□ -1.52
ATG3Q9NT62 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
ATG3Q9NT62 RNU1-63P-201ENST00000383902 164 ntBASIC5.57□□□□□ -1.52
ATG3Q9NT62 HMGB1P17-201ENST00000403495 628 ntBASIC5.57□□□□□ -1.52
ATG3Q9NT62 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
ATG3Q9NT62 RPL21P65-201ENST00000406094 466 ntBASIC5.57□□□□□ -1.52
ATG3Q9NT62 RN7SKP159-201ENST00000410657 292 ntBASIC5.57□□□□□ -1.52
ATG3Q9NT62 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC5.57□□□□□ -1.52
ATG3Q9NT62 RPL31P12-201ENST00000422587 358 ntBASIC5.57□□□□□ -1.52
ATG3Q9NT62 AL031736.2-201ENST00000426573 787 ntBASIC5.57□□□□□ -1.52
ATG3Q9NT62 AL669831.1-202ENST00000428504 417 ntBASIC5.57□□□□□ -1.52
ATG3Q9NT62 RPL21P91-201ENST00000429231 479 ntBASIC5.57□□□□□ -1.52
ATG3Q9NT62 RPS20P1-201ENST00000434853 354 ntBASIC5.57□□□□□ -1.52
ATG3Q9NT62 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC5.57□□□□□ -1.52
ATG3Q9NT62 AL138799.3-201ENST00000438968 350 ntBASIC5.57□□□□□ -1.52
ATG3Q9NT62 VN1R105P-201ENST00000486595 910 ntBASIC5.57□□□□□ -1.52
ATG3Q9NT62 AL592156.1-201ENST00000508758 304 ntBASIC5.57□□□□□ -1.52
ATG3Q9NT62 FTH1P21-201ENST00000512179 511 ntBASIC5.57□□□□□ -1.52
ATG3Q9NT62 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC5.57□□□□□ -1.52
ATG3Q9NT62 RNA5SP446-201ENST00000515955 82 ntBASIC5.57□□□□□ -1.52
ATG3Q9NT62 SCARNA24.1-201ENST00000516465 137 ntBASIC5.57□□□□□ -1.52
ATG3Q9NT62 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC5.57□□□□□ -1.52
ATG3Q9NT62 AC053481.4-201ENST00000583164 216 ntBASIC5.57□□□□□ -1.52
ATG3Q9NT62 MIR3942-201ENST00000585264 109 ntBASIC5.57□□□□□ -1.52
ATG3Q9NT62 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC5.57□□□□□ -1.52
ATG3Q9NT62 FAM157A-202ENST00000615155 405 ntBASIC5.57□□□□□ -1.52
ATG3Q9NT62 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.57□□□□□ -1.52
ATG3Q9NT62 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC5.57□□□□□ -1.52
ATG3Q9NT62 AL592182.3-201ENST00000642132 3304 ntBASIC5.57□□□□□ -1.52
ATG3Q9NT62 THUMPD3P1-201ENST00000506556 1480 ntBASIC5.57□□□□□ -1.52
ATG3Q9NT62 SMG1P4-204ENST00000523028 4131 ntBASIC5.57□□□□□ -1.52
ATG3Q9NT62 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.57□□□□□ -1.52
ATG3Q9NT62 AC114546.3-201ENST00000623582 1734 ntBASIC5.57□□□□□ -1.52
ATG3Q9NT62 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
ATG3Q9NT62 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
ATG3Q9NT62 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
ATG3Q9NT62 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
ATG3Q9NT62 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
ATG3Q9NT62 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC5.56□□□□□ -1.52
ATG3Q9NT62 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
ATG3Q9NT62 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.56□□□□□ -1.52
ATG3Q9NT62 AC105074.1-201ENST00000623380 3095 ntBASIC5.56□□□□□ -1.52
ATG3Q9NT62 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.56□□□□□ -1.52
ATG3Q9NT62 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
ATG3Q9NT62 Y_RNA.100-201ENST00000363141 102 ntBASIC5.56□□□□□ -1.52
ATG3Q9NT62 RNU6-522P-201ENST00000364497 107 ntBASIC5.56□□□□□ -1.52
ATG3Q9NT62 Y_RNA.373-201ENST00000365600 103 ntBASIC5.56□□□□□ -1.52
ATG3Q9NT62 RNU6-1151P-201ENST00000384684 107 ntBASIC5.56□□□□□ -1.52
ATG3Q9NT62 MIR554-201ENST00000384874 96 ntBASIC5.56□□□□□ -1.52
ATG3Q9NT62 MIR548K-201ENST00000408406 116 ntBASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms