Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC2.5□□□□□ -2.01
TREX1Q9NSU2 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.5□□□□□ -2.01
TREX1Q9NSU2 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.5□□□□□ -2.01
TREX1Q9NSU2 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.5□□□□□ -2.01
TREX1Q9NSU2 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC2.5□□□□□ -2.01
TREX1Q9NSU2 MIR4666A-201ENST00000580160 79 ntBASIC2.5□□□□□ -2.01
TREX1Q9NSU2 MIR5194-201ENST00000582634 120 ntBASIC2.5□□□□□ -2.01
TREX1Q9NSU2 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.5□□□□□ -2.01
TREX1Q9NSU2 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.5□□□□□ -2.01
TREX1Q9NSU2 OR2AS2P-201ENST00000606902 342 ntBASIC2.5□□□□□ -2.01
TREX1Q9NSU2 MIR7106-201ENST00000612419 65 ntBASIC2.5□□□□□ -2.01
TREX1Q9NSU2 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
TREX1Q9NSU2 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
TREX1Q9NSU2 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.49□□□□□ -2.01
TREX1Q9NSU2 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
TREX1Q9NSU2 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
TREX1Q9NSU2 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
TREX1Q9NSU2 RNU6-7-201ENST00000364784 107 ntBASIC2.49□□□□□ -2.01
TREX1Q9NSU2 RNU6-8-201ENST00000365467 107 ntBASIC2.49□□□□□ -2.01
TREX1Q9NSU2 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
TREX1Q9NSU2 RNU6-1300P-201ENST00000391046 108 ntBASIC2.49□□□□□ -2.01
TREX1Q9NSU2 AL136372.1-201ENST00000403060 228 ntBASIC2.49□□□□□ -2.01
TREX1Q9NSU2 AL162578.1-201ENST00000406202 378 ntBASIC2.49□□□□□ -2.01
TREX1Q9NSU2 NUP35P1-201ENST00000422734 947 ntBASIC2.49□□□□□ -2.01
TREX1Q9NSU2 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC2.49□□□□□ -2.01
TREX1Q9NSU2 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC2.49□□□□□ -2.01
TREX1Q9NSU2 MTCO2P17-201ENST00000424336 677 ntBASIC2.49□□□□□ -2.01
TREX1Q9NSU2 RNF2P1-201ENST00000442955 1010 ntBASIC2.49□□□□□ -2.01
TREX1Q9NSU2 RAC1P7-201ENST00000445367 377 ntBASIC2.49□□□□□ -2.01
TREX1Q9NSU2 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC2.49□□□□□ -2.01
TREX1Q9NSU2 Z82190.1-201ENST00000454534 490 ntBASIC2.49□□□□□ -2.01
TREX1Q9NSU2 RPL23AP70-201ENST00000483361 460 ntBASIC2.49□□□□□ -2.01
TREX1Q9NSU2 NAMPTP2-201ENST00000505629 1115 ntBASIC2.49□□□□□ -2.01
TREX1Q9NSU2 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC2.49□□□□□ -2.01
TREX1Q9NSU2 RNA5SP320-201ENST00000516263 124 ntBASIC2.49□□□□□ -2.01
TREX1Q9NSU2 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC2.49□□□□□ -2.01
TREX1Q9NSU2 AC024224.1-201ENST00000538284 609 ntBASIC2.49□□□□□ -2.01
TREX1Q9NSU2 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.49□□□□□ -2.01
TREX1Q9NSU2 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC2.49□□□□□ -2.01
TREX1Q9NSU2 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC2.49□□□□□ -2.01
TREX1Q9NSU2 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.49□□□□□ -2.01
TREX1Q9NSU2 AC012443.1-201ENST00000605605 231 ntBASIC2.49□□□□□ -2.01
TREX1Q9NSU2 AC091946.2-201ENST00000606105 291 ntBASIC2.49□□□□□ -2.01
TREX1Q9NSU2 AL583856.2-201ENST00000606298 543 ntBASIC2.49□□□□□ -2.01
TREX1Q9NSU2 AC073592.7-201ENST00000623659 507 ntBASIC2.49□□□□□ -2.01
TREX1Q9NSU2 AC092608.2-201ENST00000624427 218 ntBASIC2.49□□□□□ -2.01
TREX1Q9NSU2 FO624990.1-201ENST00000636373 85 ntBASIC2.49□□□□□ -2.01
TREX1Q9NSU2 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
TREX1Q9NSU2 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
TREX1Q9NSU2 Y_RNA.110-201ENST00000363220 99 ntBASIC2.48□□□□□ -2.01
TREX1Q9NSU2 Y_RNA.111-201ENST00000363248 100 ntBASIC2.48□□□□□ -2.01
TREX1Q9NSU2 RNA5SP393-201ENST00000363423 117 ntBASIC2.48□□□□□ -2.01
TREX1Q9NSU2 MIR518C-201ENST00000384822 101 ntBASIC2.48□□□□□ -2.01
TREX1Q9NSU2 AL603865.2-201ENST00000401679 213 ntBASIC2.48□□□□□ -2.01
TREX1Q9NSU2 USP9YP19-201ENST00000412165 485 ntBASIC2.48□□□□□ -2.01
TREX1Q9NSU2 BTF3P8-201ENST00000414577 526 ntBASIC2.48□□□□□ -2.01
TREX1Q9NSU2 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC2.48□□□□□ -2.01
TREX1Q9NSU2 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC2.48□□□□□ -2.01
TREX1Q9NSU2 RPL7L1P10-201ENST00000427790 463 ntBASIC2.48□□□□□ -2.01
TREX1Q9NSU2 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC2.48□□□□□ -2.01
TREX1Q9NSU2 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC2.48□□□□□ -2.01
TREX1Q9NSU2 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.48□□□□□ -2.01
TREX1Q9NSU2 AC010460.2-201ENST00000509054 677 ntBASIC2.48□□□□□ -2.01
TREX1Q9NSU2 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC2.48□□□□□ -2.01
TREX1Q9NSU2 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC2.48□□□□□ -2.01
TREX1Q9NSU2 RN7SKP24-201ENST00000515888 284 ntBASIC2.48□□□□□ -2.01
TREX1Q9NSU2 RNA5SP471-201ENST00000516971 106 ntBASIC2.48□□□□□ -2.01
TREX1Q9NSU2 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC2.48□□□□□ -2.01
TREX1Q9NSU2 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
TREX1Q9NSU2 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC2.48□□□□□ -2.01
TREX1Q9NSU2 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC2.48□□□□□ -2.01
TREX1Q9NSU2 AL136520.1-202ENST00000555494 763 ntBASIC2.48□□□□□ -2.01
TREX1Q9NSU2 AC009163.5-201ENST00000575421 637 ntBASIC2.48□□□□□ -2.01
TREX1Q9NSU2 AC011260.1-201ENST00000578420 472 ntBASIC2.48□□□□□ -2.01
TREX1Q9NSU2 MTATP6P2-201ENST00000603319 678 ntBASIC2.48□□□□□ -2.01
TREX1Q9NSU2 AL031176.1-201ENST00000604554 466 ntBASIC2.48□□□□□ -2.01
TREX1Q9NSU2 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC2.48□□□□□ -2.01
TREX1Q9NSU2 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC2.48□□□□□ -2.01
TREX1Q9NSU2 AL356585.4-201ENST00000623078 1229 ntBASIC2.48□□□□□ -2.01
TREX1Q9NSU2 AC010297.1-201ENST00000623948 149 ntBASIC2.48□□□□□ -2.01
TREX1Q9NSU2 AC079228.1-201ENST00000624774 1049 ntBASIC2.48□□□□□ -2.01
TREX1Q9NSU2 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
TREX1Q9NSU2 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.48□□□□□ -2.01
TREX1Q9NSU2 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
TREX1Q9NSU2 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.47□□□□□ -2.01
TREX1Q9NSU2 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
TREX1Q9NSU2 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
TREX1Q9NSU2 AC006378.2-201ENST00000623178 2476 ntBASIC2.47□□□□□ -2.01
TREX1Q9NSU2 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
TREX1Q9NSU2 RNU1-105P-201ENST00000363470 161 ntBASIC2.47□□□□□ -2.01
TREX1Q9NSU2 RNU6-1155P-201ENST00000363554 107 ntBASIC2.47□□□□□ -2.01
TREX1Q9NSU2 U8.8-201ENST00000365399 135 ntBASIC2.47□□□□□ -2.01
TREX1Q9NSU2 RNA5SP184-201ENST00000411071 108 ntBASIC2.47□□□□□ -2.01
TREX1Q9NSU2 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC2.47□□□□□ -2.01
TREX1Q9NSU2 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.47□□□□□ -2.01
TREX1Q9NSU2 AC027644.1-201ENST00000419595 298 ntBASIC2.47□□□□□ -2.01
TREX1Q9NSU2 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.47□□□□□ -2.01
TREX1Q9NSU2 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC2.47□□□□□ -2.01
TREX1Q9NSU2 NDUFB4P6-201ENST00000436819 366 ntBASIC2.47□□□□□ -2.01
TREX1Q9NSU2 AL109933.2-201ENST00000452651 260 ntBASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 125.2 ms