Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.15□□□□□ -2.06
CISHQ9NSE2 MTND5P31-201ENST00000419366 1374 ntBASIC2.15□□□□□ -2.07
CISHQ9NSE2 RNU6-730P-201ENST00000383954 104 ntBASIC2.15□□□□□ -2.07
CISHQ9NSE2 AL079342.1-201ENST00000401460 267 ntBASIC2.15□□□□□ -2.07
CISHQ9NSE2 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.15□□□□□ -2.07
CISHQ9NSE2 USP9YP27-201ENST00000418455 438 ntBASIC2.15□□□□□ -2.07
CISHQ9NSE2 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.15□□□□□ -2.07
CISHQ9NSE2 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC2.15□□□□□ -2.07
CISHQ9NSE2 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.15□□□□□ -2.07
CISHQ9NSE2 AC009237.8-201ENST00000445492 379 ntBASIC2.15□□□□□ -2.07
CISHQ9NSE2 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC2.15□□□□□ -2.07
CISHQ9NSE2 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.15□□□□□ -2.07
CISHQ9NSE2 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.15□□□□□ -2.07
CISHQ9NSE2 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.15□□□□□ -2.07
CISHQ9NSE2 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.15□□□□□ -2.07
CISHQ9NSE2 HIGD1AP6-201ENST00000521833 279 ntBASIC2.15□□□□□ -2.07
CISHQ9NSE2 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.15□□□□□ -2.07
CISHQ9NSE2 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.15□□□□□ -2.07
CISHQ9NSE2 AC012414.2-201ENST00000559474 187 ntBASIC2.15□□□□□ -2.07
CISHQ9NSE2 AC016542.1-201ENST00000608259 493 ntBASIC2.15□□□□□ -2.07
CISHQ9NSE2 FRG1HP-204ENST00000617940 757 ntBASIC2.15□□□□□ -2.07
CISHQ9NSE2 AC073968.1-201ENST00000618594 637 ntBASIC2.15□□□□□ -2.07
CISHQ9NSE2 AC068722.2-201ENST00000618734 544 ntBASIC2.15□□□□□ -2.07
CISHQ9NSE2 FO624990.1-201ENST00000636373 85 ntBASIC2.15□□□□□ -2.07
CISHQ9NSE2 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.15□□□□□ -2.07
CISHQ9NSE2 AC093536.2-201ENST00000565257 1406 ntBASIC2.15□□□□□ -2.07
CISHQ9NSE2 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
CISHQ9NSE2 AL513185.3-201ENST00000433335 1300 ntBASIC2.15□□□□□ -2.07
CISHQ9NSE2 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.15□□□□□ -2.07
CISHQ9NSE2 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC2.14□□□□□ -2.07
CISHQ9NSE2 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.14□□□□□ -2.07
CISHQ9NSE2 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC2.14□□□□□ -2.07
CISHQ9NSE2 RNU6-253P-201ENST00000384730 105 ntBASIC2.14□□□□□ -2.07
CISHQ9NSE2 TAS2R15P-201ENST00000390674 928 ntBASIC2.14□□□□□ -2.07
CISHQ9NSE2 AL589655.1-201ENST00000405398 482 ntBASIC2.14□□□□□ -2.07
CISHQ9NSE2 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC2.14□□□□□ -2.07
CISHQ9NSE2 UBE2V1P11-201ENST00000411559 285 ntBASIC2.14□□□□□ -2.07
CISHQ9NSE2 OFD1P12Y-201ENST00000427963 1207 ntBASIC2.14□□□□□ -2.07
CISHQ9NSE2 WARS2P1-201ENST00000429678 537 ntBASIC2.14□□□□□ -2.07
CISHQ9NSE2 OFD1P13Y-201ENST00000431179 1232 ntBASIC2.14□□□□□ -2.07
CISHQ9NSE2 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC2.14□□□□□ -2.07
CISHQ9NSE2 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.14□□□□□ -2.07
CISHQ9NSE2 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
CISHQ9NSE2 XKRY2-201ENST00000442362 1093 ntBASIC2.14□□□□□ -2.07
CISHQ9NSE2 MTND2P19-201ENST00000449129 1012 ntBASIC2.14□□□□□ -2.07
CISHQ9NSE2 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC2.14□□□□□ -2.07
CISHQ9NSE2 BX248409.1-201ENST00000455497 255 ntBASIC2.14□□□□□ -2.07
CISHQ9NSE2 RNU6-717P-201ENST00000459076 104 ntBASIC2.14□□□□□ -2.07
CISHQ9NSE2 AC090255.1-201ENST00000495779 349 ntBASIC2.14□□□□□ -2.07
CISHQ9NSE2 RNU1-40P-201ENST00000516816 164 ntBASIC2.14□□□□□ -2.07
CISHQ9NSE2 RNU1-97P-201ENST00000516872 164 ntBASIC2.14□□□□□ -2.07
CISHQ9NSE2 RNU4ATAC10P-201ENST00000516967 122 ntBASIC2.14□□□□□ -2.07
CISHQ9NSE2 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC2.14□□□□□ -2.07
CISHQ9NSE2 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.14□□□□□ -2.07
CISHQ9NSE2 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.14□□□□□ -2.07
CISHQ9NSE2 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.14□□□□□ -2.07
CISHQ9NSE2 MED28P6-201ENST00000558776 231 ntBASIC2.14□□□□□ -2.07
CISHQ9NSE2 FAM60BP-201ENST00000578364 658 ntBASIC2.14□□□□□ -2.07
CISHQ9NSE2 MIR5089-201ENST00000580047 84 ntBASIC2.14□□□□□ -2.07
CISHQ9NSE2 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.14□□□□□ -2.07
CISHQ9NSE2 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.14□□□□□ -2.07
CISHQ9NSE2 YWHAEP7-203ENST00000622054 312 ntBASIC2.14□□□□□ -2.07
CISHQ9NSE2 AL353748.2-201ENST00000622148 471 ntBASIC2.14□□□□□ -2.07
CISHQ9NSE2 AC090617.9-201ENST00000623751 147 ntBASIC2.14□□□□□ -2.07
CISHQ9NSE2 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.14□□□□□ -2.07
CISHQ9NSE2 AC087359.1-201ENST00000508335 1740 ntBASIC2.14□□□□□ -2.07
CISHQ9NSE2 AC008669.1-201ENST00000565823 2178 ntBASIC2.13□□□□□ -2.07
CISHQ9NSE2 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.13□□□□□ -2.07
CISHQ9NSE2 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC2.13□□□□□ -2.07
CISHQ9NSE2 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
CISHQ9NSE2 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.13□□□□□ -2.07
CISHQ9NSE2 RNA5SP37-201ENST00000365420 130 ntBASIC2.13□□□□□ -2.07
CISHQ9NSE2 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
CISHQ9NSE2 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
CISHQ9NSE2 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.13□□□□□ -2.07
CISHQ9NSE2 SUMO1P4-201ENST00000429430 302 ntBASIC2.13□□□□□ -2.07
CISHQ9NSE2 AC004866.2-201ENST00000438285 481 ntBASIC2.13□□□□□ -2.07
CISHQ9NSE2 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.13□□□□□ -2.07
CISHQ9NSE2 OR6K5P-201ENST00000447050 945 ntBASIC2.13□□□□□ -2.07
CISHQ9NSE2 OR51B8P-201ENST00000449892 769 ntBASIC2.13□□□□□ -2.07
CISHQ9NSE2 AC104073.1-201ENST00000451988 151 ntBASIC2.13□□□□□ -2.07
CISHQ9NSE2 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.13□□□□□ -2.07
CISHQ9NSE2 AC025768.1-201ENST00000510057 267 ntBASIC2.13□□□□□ -2.07
CISHQ9NSE2 RNU1-104P-201ENST00000517280 175 ntBASIC2.13□□□□□ -2.07
CISHQ9NSE2 HSPE1P18-201ENST00000517602 280 ntBASIC2.13□□□□□ -2.07
CISHQ9NSE2 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
CISHQ9NSE2 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.13□□□□□ -2.07
CISHQ9NSE2 AC002984.1-201ENST00000591692 448 ntBASIC2.13□□□□□ -2.07
CISHQ9NSE2 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC2.13□□□□□ -2.07
CISHQ9NSE2 AL049779.4-201ENST00000604500 156 ntBASIC2.13□□□□□ -2.07
CISHQ9NSE2 MTCO1P18-201ENST00000455518 1419 ntBASIC2.13□□□□□ -2.07
CISHQ9NSE2 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
CISHQ9NSE2 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.13□□□□□ -2.07
CISHQ9NSE2 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.12□□□□□ -2.07
CISHQ9NSE2 RNU6-252P-201ENST00000363232 107 ntBASIC2.12□□□□□ -2.07
CISHQ9NSE2 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
CISHQ9NSE2 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC2.12□□□□□ -2.07
CISHQ9NSE2 ZNF965P-201ENST00000432501 817 ntBASIC2.12□□□□□ -2.07
CISHQ9NSE2 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.12□□□□□ -2.07
CISHQ9NSE2 CBWD4P-201ENST00000445695 655 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms