Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
VPS45Q9NRW7 ZNF962P-201ENST00000443465 3140 ntBASIC4.12□□□□□ -1.75
VPS45Q9NRW7 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC4.12□□□□□ -1.75
VPS45Q9NRW7 OR4G2P-201ENST00000328113 903 ntBASIC4.12□□□□□ -1.75
VPS45Q9NRW7 RNU6-600P-201ENST00000362524 99 ntBASIC4.12□□□□□ -1.75
VPS45Q9NRW7 RNY4P34-201ENST00000364779 95 ntBASIC4.12□□□□□ -1.75
VPS45Q9NRW7 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
VPS45Q9NRW7 RNU6-1207P-201ENST00000384343 107 ntBASIC4.12□□□□□ -1.75
VPS45Q9NRW7 MIR491-201ENST00000384877 84 ntBASIC4.12□□□□□ -1.75
VPS45Q9NRW7 MIR34B-201ENST00000385076 84 ntBASIC4.12□□□□□ -1.75
VPS45Q9NRW7 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
VPS45Q9NRW7 MIR1251-201ENST00000408552 70 ntBASIC4.12□□□□□ -1.75
VPS45Q9NRW7 AL359704.1-201ENST00000411586 781 ntBASIC4.12□□□□□ -1.75
VPS45Q9NRW7 MTND1P21-201ENST00000412991 285 ntBASIC4.12□□□□□ -1.75
VPS45Q9NRW7 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC4.12□□□□□ -1.75
VPS45Q9NRW7 AL691449.1-201ENST00000426570 421 ntBASIC4.12□□□□□ -1.75
VPS45Q9NRW7 AF228730.2-201ENST00000438784 848 ntBASIC4.12□□□□□ -1.75
VPS45Q9NRW7 OFD1P4Y-201ENST00000455273 1179 ntBASIC4.12□□□□□ -1.75
VPS45Q9NRW7 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.12□□□□□ -1.75
VPS45Q9NRW7 AC092451.1-201ENST00000480211 153 ntBASIC4.12□□□□□ -1.75
VPS45Q9NRW7 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC4.12□□□□□ -1.75
VPS45Q9NRW7 MTND1P3-201ENST00000484956 952 ntBASIC4.12□□□□□ -1.75
VPS45Q9NRW7 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC4.12□□□□□ -1.75
VPS45Q9NRW7 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC4.12□□□□□ -1.75
VPS45Q9NRW7 AC017037.2-201ENST00000513850 890 ntBASIC4.12□□□□□ -1.75
VPS45Q9NRW7 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC4.12□□□□□ -1.75
VPS45Q9NRW7 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC4.12□□□□□ -1.75
VPS45Q9NRW7 SNORA74D-201ENST00000516404 141 ntBASIC4.12□□□□□ -1.75
VPS45Q9NRW7 RNU6-1178P-201ENST00000516674 107 ntBASIC4.12□□□□□ -1.75
VPS45Q9NRW7 RNU6-528P-201ENST00000516926 100 ntBASIC4.12□□□□□ -1.75
VPS45Q9NRW7 SNORA70.24-201ENST00000517233 118 ntBASIC4.12□□□□□ -1.75
VPS45Q9NRW7 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.12□□□□□ -1.75
VPS45Q9NRW7 TPRKBP2-201ENST00000565969 475 ntBASIC4.12□□□□□ -1.75
VPS45Q9NRW7 AC022968.1-201ENST00000567372 442 ntBASIC4.12□□□□□ -1.75
VPS45Q9NRW7 AC025627.2-201ENST00000576220 160 ntBASIC4.12□□□□□ -1.75
VPS45Q9NRW7 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.12□□□□□ -1.75
VPS45Q9NRW7 AL592436.1-201ENST00000605135 558 ntBASIC4.12□□□□□ -1.75
VPS45Q9NRW7 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC4.12□□□□□ -1.75
VPS45Q9NRW7 OR10AB1P-201ENST00000609613 938 ntBASIC4.12□□□□□ -1.75
VPS45Q9NRW7 AC096577.2-201ENST00000611455 153 ntBASIC4.12□□□□□ -1.75
VPS45Q9NRW7 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC4.12□□□□□ -1.75
VPS45Q9NRW7 AC079597.1-201ENST00000624306 508 ntBASIC4.12□□□□□ -1.75
VPS45Q9NRW7 AC048347.1-201ENST00000624621 427 ntBASIC4.12□□□□□ -1.75
VPS45Q9NRW7 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.12□□□□□ -1.75
VPS45Q9NRW7 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC4.12□□□□□ -1.75
VPS45Q9NRW7 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC4.12□□□□□ -1.75
VPS45Q9NRW7 AC010149.2-201ENST00000637608 315 ntBASIC4.12□□□□□ -1.75
VPS45Q9NRW7 AC009093.8-201ENST00000641769 292 ntBASIC4.12□□□□□ -1.75
VPS45Q9NRW7 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
VPS45Q9NRW7 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
VPS45Q9NRW7 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.12□□□□□ -1.75
VPS45Q9NRW7 AC092125.1-201ENST00000562568 1995 ntBASIC4.12□□□□□ -1.75
VPS45Q9NRW7 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
VPS45Q9NRW7 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
VPS45Q9NRW7 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
VPS45Q9NRW7 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
VPS45Q9NRW7 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC4.11□□□□□ -1.75
VPS45Q9NRW7 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
VPS45Q9NRW7 GNG5P1-201ENST00000255500 204 ntBASIC4.11□□□□□ -1.75
VPS45Q9NRW7 U8.3-201ENST00000363321 132 ntBASIC4.11□□□□□ -1.75
VPS45Q9NRW7 SNORD35B-201ENST00000363660 87 ntBASIC4.11□□□□□ -1.75
VPS45Q9NRW7 RNU6-173P-201ENST00000364215 104 ntBASIC4.11□□□□□ -1.75
VPS45Q9NRW7 Y_RNA.296-201ENST00000364930 108 ntBASIC4.11□□□□□ -1.75
VPS45Q9NRW7 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
VPS45Q9NRW7 RNU6-882P-201ENST00000391025 103 ntBASIC4.11□□□□□ -1.75
VPS45Q9NRW7 AL136372.1-201ENST00000403060 228 ntBASIC4.11□□□□□ -1.75
VPS45Q9NRW7 SNORA3C-201ENST00000408792 125 ntBASIC4.11□□□□□ -1.75
VPS45Q9NRW7 HSPE1P12-201ENST00000412576 301 ntBASIC4.11□□□□□ -1.75
VPS45Q9NRW7 AL353777.1-201ENST00000425552 326 ntBASIC4.11□□□□□ -1.75
VPS45Q9NRW7 AC010655.1-201ENST00000449336 292 ntBASIC4.11□□□□□ -1.75
VPS45Q9NRW7 RGS5-217ENST00000451759 835 ntTSL 3 BASIC4.11□□□□□ -1.75
VPS45Q9NRW7 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.11□□□□□ -1.75
VPS45Q9NRW7 AC104308.1-201ENST00000454621 333 ntBASIC4.11□□□□□ -1.75
VPS45Q9NRW7 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.11□□□□□ -1.75
VPS45Q9NRW7 KCTD9P5-201ENST00000504141 1170 ntBASIC4.11□□□□□ -1.75
VPS45Q9NRW7 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC4.11□□□□□ -1.75
VPS45Q9NRW7 AC110768.1-201ENST00000509222 400 ntBASIC4.11□□□□□ -1.75
VPS45Q9NRW7 Y_RNA.672-201ENST00000516289 104 ntBASIC4.11□□□□□ -1.75
VPS45Q9NRW7 RNA5SP468-201ENST00000516782 93 ntBASIC4.11□□□□□ -1.75
VPS45Q9NRW7 RNU2-46P-201ENST00000517038 113 ntBASIC4.11□□□□□ -1.75
VPS45Q9NRW7 AC026403.1-201ENST00000518938 295 ntBASIC4.11□□□□□ -1.75
VPS45Q9NRW7 AC022616.6-201ENST00000520479 119 ntBASIC4.11□□□□□ -1.75
VPS45Q9NRW7 AP003497.1-201ENST00000528472 562 ntBASIC4.11□□□□□ -1.75
VPS45Q9NRW7 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC4.11□□□□□ -1.75
VPS45Q9NRW7 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC4.11□□□□□ -1.75
VPS45Q9NRW7 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.11□□□□□ -1.75
VPS45Q9NRW7 AC009101.1-201ENST00000568135 242 ntBASIC4.11□□□□□ -1.75
VPS45Q9NRW7 AL391840.1-201ENST00000571144 367 ntBASIC4.11□□□□□ -1.75
VPS45Q9NRW7 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.11□□□□□ -1.75
VPS45Q9NRW7 DUXAP4-201ENST00000603046 613 ntBASIC4.11□□□□□ -1.75
VPS45Q9NRW7 AC012531.5-201ENST00000611375 151 ntBASIC4.11□□□□□ -1.75
VPS45Q9NRW7 AC091304.9-201ENST00000612091 226 ntBASIC4.11□□□□□ -1.75
VPS45Q9NRW7 AC009159.1-201ENST00000618386 642 ntBASIC4.11□□□□□ -1.75
VPS45Q9NRW7 AC136475.10-201ENST00000620253 385 ntBASIC4.11□□□□□ -1.75
VPS45Q9NRW7 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.11□□□□□ -1.75
VPS45Q9NRW7 LINC02471-203ENST00000641941 4752 ntBASIC4.11□□□□□ -1.75
VPS45Q9NRW7 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.11□□□□□ -1.75
VPS45Q9NRW7 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.11□□□□□ -1.75
VPS45Q9NRW7 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
VPS45Q9NRW7 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms