Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 RPS3AP36-201ENST00000398190 775 ntBASIC3.59□□□□□ -1.83
PCDH9Q9HC56 CCNG1P1-201ENST00000406783 885 ntBASIC3.59□□□□□ -1.83
PCDH9Q9HC56 RNA5SP31-201ENST00000411144 127 ntBASIC3.59□□□□□ -1.83
PCDH9Q9HC56 AF274854.1-201ENST00000413236 615 ntBASIC3.59□□□□□ -1.83
PCDH9Q9HC56 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.59□□□□□ -1.83
PCDH9Q9HC56 AC017079.2-201ENST00000416102 485 ntBASIC3.59□□□□□ -1.83
PCDH9Q9HC56 RPL23AP82-202ENST00000427528 469 ntBASIC3.59□□□□□ -1.83
PCDH9Q9HC56 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC3.59□□□□□ -1.83
PCDH9Q9HC56 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.59□□□□□ -1.83
PCDH9Q9HC56 GOT2P5-201ENST00000433995 546 ntBASIC3.59□□□□□ -1.83
PCDH9Q9HC56 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
PCDH9Q9HC56 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.59□□□□□ -1.83
PCDH9Q9HC56 AC244505.5-201ENST00000443639 207 ntBASIC3.59□□□□□ -1.83
PCDH9Q9HC56 SNRPFP4-201ENST00000456366 242 ntBASIC3.59□□□□□ -1.83
PCDH9Q9HC56 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3.59□□□□□ -1.83
PCDH9Q9HC56 SNORD42A-201ENST00000459584 64 ntBASIC3.59□□□□□ -1.83
PCDH9Q9HC56 CENPBD1P1-201ENST00000464061 469 ntBASIC3.59□□□□□ -1.83
PCDH9Q9HC56 KLF3P2-201ENST00000465138 268 ntBASIC3.59□□□□□ -1.83
PCDH9Q9HC56 LARP1BP2-201ENST00000486594 519 ntBASIC3.59□□□□□ -1.83
PCDH9Q9HC56 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.59□□□□□ -1.83
PCDH9Q9HC56 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.59□□□□□ -1.83
PCDH9Q9HC56 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.59□□□□□ -1.83
PCDH9Q9HC56 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.59□□□□□ -1.83
PCDH9Q9HC56 CDC42P4-201ENST00000510507 563 ntBASIC3.59□□□□□ -1.83
PCDH9Q9HC56 MIR2276-201ENST00000516886 89 ntBASIC3.59□□□□□ -1.83
PCDH9Q9HC56 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.59□□□□□ -1.83
PCDH9Q9HC56 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC3.59□□□□□ -1.83
PCDH9Q9HC56 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.59□□□□□ -1.83
PCDH9Q9HC56 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.59□□□□□ -1.83
PCDH9Q9HC56 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.59□□□□□ -1.83
PCDH9Q9HC56 AC009977.1-201ENST00000586015 570 ntBASIC3.59□□□□□ -1.83
PCDH9Q9HC56 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.59□□□□□ -1.83
PCDH9Q9HC56 AC004853.1-201ENST00000604902 698 ntBASIC3.59□□□□□ -1.83
PCDH9Q9HC56 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.59□□□□□ -1.83
PCDH9Q9HC56 AC131902.3-201ENST00000611767 581 ntBASIC3.59□□□□□ -1.83
PCDH9Q9HC56 AL589743.7-201ENST00000612637 233 ntBASIC3.59□□□□□ -1.83
PCDH9Q9HC56 U73479.1-201ENST00000618062 168 ntBASIC3.59□□□□□ -1.83
PCDH9Q9HC56 AL596245.1-201ENST00000618994 362 ntBASIC3.59□□□□□ -1.83
PCDH9Q9HC56 AC018755.4-201ENST00000619715 454 ntBASIC3.59□□□□□ -1.83
PCDH9Q9HC56 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.59□□□□□ -1.83
PCDH9Q9HC56 AC110994.2-201ENST00000635481 492 ntBASIC3.59□□□□□ -1.83
PCDH9Q9HC56 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
PCDH9Q9HC56 AC091152.2-201ENST00000591628 2569 ntBASIC3.59□□□□□ -1.83
PCDH9Q9HC56 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.59□□□□□ -1.83
PCDH9Q9HC56 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
PCDH9Q9HC56 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.59□□□□□ -1.83
PCDH9Q9HC56 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.59□□□□□ -1.84
PCDH9Q9HC56 RIOK3P1-201ENST00000418778 1528 ntBASIC3.59□□□□□ -1.84
PCDH9Q9HC56 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
PCDH9Q9HC56 AC092447.10-201ENST00000620607 1652 ntBASIC3.59□□□□□ -1.84
PCDH9Q9HC56 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
PCDH9Q9HC56 MTND5P29-201ENST00000458676 1807 ntBASIC3.58□□□□□ -1.84
PCDH9Q9HC56 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PCDH9Q9HC56 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
PCDH9Q9HC56 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.58□□□□□ -1.84
PCDH9Q9HC56 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
PCDH9Q9HC56 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PCDH9Q9HC56 RNU1-75P-201ENST00000347264 129 ntBASIC3.58□□□□□ -1.84
PCDH9Q9HC56 FRG1CP-201ENST00000358464 769 ntBASIC3.58□□□□□ -1.84
PCDH9Q9HC56 RNA5SP258-201ENST00000362750 119 ntBASIC3.58□□□□□ -1.84
PCDH9Q9HC56 RNY4P34-201ENST00000364779 95 ntBASIC3.58□□□□□ -1.84
PCDH9Q9HC56 SNORA73.2-201ENST00000364946 201 ntBASIC3.58□□□□□ -1.84
PCDH9Q9HC56 FCF1P10-201ENST00000407590 479 ntBASIC3.58□□□□□ -1.84
PCDH9Q9HC56 Y_RNA.608-201ENST00000410647 95 ntBASIC3.58□□□□□ -1.84
PCDH9Q9HC56 RNU2-66P-201ENST00000410650 161 ntBASIC3.58□□□□□ -1.84
PCDH9Q9HC56 AL359704.1-201ENST00000411586 781 ntBASIC3.58□□□□□ -1.84
PCDH9Q9HC56 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.58□□□□□ -1.84
PCDH9Q9HC56 DBIP2-201ENST00000419076 262 ntBASIC3.58□□□□□ -1.84
PCDH9Q9HC56 RPL31P12-201ENST00000422587 358 ntBASIC3.58□□□□□ -1.84
PCDH9Q9HC56 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.58□□□□□ -1.84
PCDH9Q9HC56 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.58□□□□□ -1.84
PCDH9Q9HC56 Z95327.1-201ENST00000446082 482 ntBASIC3.58□□□□□ -1.84
PCDH9Q9HC56 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.58□□□□□ -1.84
PCDH9Q9HC56 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.58□□□□□ -1.84
PCDH9Q9HC56 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC3.58□□□□□ -1.84
PCDH9Q9HC56 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.58□□□□□ -1.84
PCDH9Q9HC56 RPL23AP67-201ENST00000465341 474 ntBASIC3.58□□□□□ -1.84
PCDH9Q9HC56 AC106707.2-201ENST00000484182 374 ntBASIC3.58□□□□□ -1.84
PCDH9Q9HC56 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
PCDH9Q9HC56 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.58□□□□□ -1.84
PCDH9Q9HC56 AC109464.2-201ENST00000510242 943 ntBASIC3.58□□□□□ -1.84
PCDH9Q9HC56 RN7SKP298-201ENST00000515950 94 ntBASIC3.58□□□□□ -1.84
PCDH9Q9HC56 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.58□□□□□ -1.84
PCDH9Q9HC56 AC026403.1-201ENST00000518938 295 ntBASIC3.58□□□□□ -1.84
PCDH9Q9HC56 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.58□□□□□ -1.84
PCDH9Q9HC56 AL157394.1-201ENST00000562983 1224 ntBASIC3.58□□□□□ -1.84
PCDH9Q9HC56 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.58□□□□□ -1.84
PCDH9Q9HC56 MIR3913-1-201ENST00000577744 102 ntBASIC3.58□□□□□ -1.84
PCDH9Q9HC56 AL669831.4-202ENST00000590817 238 ntBASIC3.58□□□□□ -1.84
PCDH9Q9HC56 AL355812.1-201ENST00000603215 216 ntBASIC3.58□□□□□ -1.84
PCDH9Q9HC56 AC080078.2-201ENST00000603766 501 ntBASIC3.58□□□□□ -1.84
PCDH9Q9HC56 OR10AB1P-201ENST00000609613 938 ntBASIC3.58□□□□□ -1.84
PCDH9Q9HC56 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.58□□□□□ -1.84
PCDH9Q9HC56 AC108479.2-201ENST00000617314 601 ntBASIC3.58□□□□□ -1.84
PCDH9Q9HC56 AC068792.1-201ENST00000621354 417 ntBASIC3.58□□□□□ -1.84
PCDH9Q9HC56 U4.6-201ENST00000621618 127 ntBASIC3.58□□□□□ -1.84
PCDH9Q9HC56 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.58□□□□□ -1.84
PCDH9Q9HC56 AC009093.8-201ENST00000641769 292 ntBASIC3.58□□□□□ -1.84
PCDH9Q9HC56 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
PCDH9Q9HC56 AC027514.1-201ENST00000588561 1603 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms