Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC4.01□□□□□ -1.77
USP29Q9HBJ7 MT-TC-201ENST00000387405 66 ntBASIC4.01□□□□□ -1.77
USP29Q9HBJ7 MIR670-201ENST00000390142 98 ntBASIC4.01□□□□□ -1.77
USP29Q9HBJ7 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
USP29Q9HBJ7 RNA5SP171-201ENST00000391071 115 ntBASIC4.01□□□□□ -1.77
USP29Q9HBJ7 MRPL42P2-201ENST00000403169 426 ntBASIC4.01□□□□□ -1.77
USP29Q9HBJ7 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC4.01□□□□□ -1.77
USP29Q9HBJ7 AC019097.1-201ENST00000424783 735 ntBASIC4.01□□□□□ -1.77
USP29Q9HBJ7 AC006548.1-201ENST00000427470 102 ntBASIC4.01□□□□□ -1.77
USP29Q9HBJ7 MTCO2P19-201ENST00000427513 598 ntBASIC4.01□□□□□ -1.77
USP29Q9HBJ7 AC133104.1-201ENST00000429100 218 ntBASIC4.01□□□□□ -1.77
USP29Q9HBJ7 RANP8-201ENST00000444720 713 ntBASIC4.01□□□□□ -1.77
USP29Q9HBJ7 AL133547.1-201ENST00000448546 220 ntBASIC4.01□□□□□ -1.77
USP29Q9HBJ7 AL500522.2-201ENST00000448562 343 ntBASIC4.01□□□□□ -1.77
USP29Q9HBJ7 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC4.01□□□□□ -1.77
USP29Q9HBJ7 S100A11P1-201ENST00000477525 312 ntBASIC4.01□□□□□ -1.77
USP29Q9HBJ7 RPL23AP41-201ENST00000484754 458 ntBASIC4.01□□□□□ -1.77
USP29Q9HBJ7 THAP6-203ENST00000502620 582 ntTSL 3 BASIC4.01□□□□□ -1.77
USP29Q9HBJ7 FAM92A1P2-202ENST00000504766 877 ntBASIC4.01□□□□□ -1.77
USP29Q9HBJ7 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.01□□□□□ -1.77
USP29Q9HBJ7 AC010587.1-201ENST00000505809 469 ntBASIC4.01□□□□□ -1.77
USP29Q9HBJ7 AC017037.2-201ENST00000513850 890 ntBASIC4.01□□□□□ -1.77
USP29Q9HBJ7 AC010342.1-201ENST00000514047 877 ntBASIC4.01□□□□□ -1.77
USP29Q9HBJ7 Vault.3-201ENST00000516676 95 ntBASIC4.01□□□□□ -1.77
USP29Q9HBJ7 RNU6-445P-201ENST00000516949 107 ntBASIC4.01□□□□□ -1.77
USP29Q9HBJ7 OR4R3P-201ENST00000525084 838 ntBASIC4.01□□□□□ -1.77
USP29Q9HBJ7 AP000907.2-201ENST00000530827 353 ntBASIC4.01□□□□□ -1.77
USP29Q9HBJ7 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
USP29Q9HBJ7 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC4.01□□□□□ -1.77
USP29Q9HBJ7 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.01□□□□□ -1.77
USP29Q9HBJ7 AC090877.1-201ENST00000561418 344 ntBASIC4.01□□□□□ -1.77
USP29Q9HBJ7 AL845331.3-202ENST00000562856 261 ntBASIC4.01□□□□□ -1.77
USP29Q9HBJ7 AC099489.2-201ENST00000574976 260 ntBASIC4.01□□□□□ -1.77
USP29Q9HBJ7 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC4.01□□□□□ -1.77
USP29Q9HBJ7 MIR3146-201ENST00000580367 79 ntBASIC4.01□□□□□ -1.77
USP29Q9HBJ7 AC112230.1-201ENST00000604342 547 ntBASIC4.01□□□□□ -1.77
USP29Q9HBJ7 AC017083.3-201ENST00000609955 700 ntBASIC4.01□□□□□ -1.77
USP29Q9HBJ7 AL590099.1-201ENST00000615276 138 ntBASIC4.01□□□□□ -1.77
USP29Q9HBJ7 MIR6500-201ENST00000622700 86 ntBASIC4.01□□□□□ -1.77
USP29Q9HBJ7 AL356585.4-201ENST00000623078 1229 ntBASIC4.01□□□□□ -1.77
USP29Q9HBJ7 CR381572.1-201ENST00000625098 102 ntBASIC4.01□□□□□ -1.77
USP29Q9HBJ7 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.01□□□□□ -1.77
USP29Q9HBJ7 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC4.01□□□□□ -1.77
USP29Q9HBJ7 AC244258.1-201ENST00000637553 1071 ntBASIC4.01□□□□□ -1.77
USP29Q9HBJ7 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.01□□□□□ -1.77
USP29Q9HBJ7 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
USP29Q9HBJ7 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
USP29Q9HBJ7 RPS4XP5-202ENST00000449995 1334 ntBASIC4□□□□□ -1.77
USP29Q9HBJ7 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4□□□□□ -1.77
USP29Q9HBJ7 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
USP29Q9HBJ7 Y_RNA.1-201ENST00000352915 104 ntBASIC4□□□□□ -1.77
USP29Q9HBJ7 Y_RNA.9-201ENST00000362354 101 ntBASIC4□□□□□ -1.77
USP29Q9HBJ7 Y_RNA.88-201ENST00000363029 99 ntBASIC4□□□□□ -1.77
USP29Q9HBJ7 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
USP29Q9HBJ7 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC4□□□□□ -1.77
USP29Q9HBJ7 RNY3P14-201ENST00000384309 102 ntBASIC4□□□□□ -1.77
USP29Q9HBJ7 Y_RNA.493-201ENST00000384422 102 ntBASIC4□□□□□ -1.77
USP29Q9HBJ7 RNU6-114P-201ENST00000384704 105 ntBASIC4□□□□□ -1.77
USP29Q9HBJ7 MIR449B-201ENST00000384995 97 ntBASIC4□□□□□ -1.77
USP29Q9HBJ7 AL590002.1-201ENST00000406554 418 ntBASIC4□□□□□ -1.77
USP29Q9HBJ7 RNA5SP44-201ENST00000410446 133 ntBASIC4□□□□□ -1.77
USP29Q9HBJ7 AC127391.1-201ENST00000411737 98 ntBASIC4□□□□□ -1.77
USP29Q9HBJ7 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC4□□□□□ -1.77
USP29Q9HBJ7 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4□□□□□ -1.77
USP29Q9HBJ7 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC4□□□□□ -1.77
USP29Q9HBJ7 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC4□□□□□ -1.77
USP29Q9HBJ7 AL691449.1-201ENST00000426570 421 ntBASIC4□□□□□ -1.77
USP29Q9HBJ7 AC073464.1-201ENST00000429823 534 ntBASIC4□□□□□ -1.77
USP29Q9HBJ7 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4□□□□□ -1.77
USP29Q9HBJ7 AL358232.1-201ENST00000448030 501 ntBASIC4□□□□□ -1.77
USP29Q9HBJ7 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC4□□□□□ -1.77
USP29Q9HBJ7 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC4□□□□□ -1.77
USP29Q9HBJ7 RN7SKP116-201ENST00000516902 319 ntBASIC4□□□□□ -1.77
USP29Q9HBJ7 OR5AQ1P-201ENST00000527596 927 ntBASIC4□□□□□ -1.77
USP29Q9HBJ7 OR4P1P-201ENST00000530808 1136 ntBASIC4□□□□□ -1.77
USP29Q9HBJ7 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4□□□□□ -1.77
USP29Q9HBJ7 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC4□□□□□ -1.77
USP29Q9HBJ7 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4□□□□□ -1.77
USP29Q9HBJ7 AC120057.2-201ENST00000571520 271 ntBASIC4□□□□□ -1.77
USP29Q9HBJ7 AL669831.4-202ENST00000590817 238 ntBASIC4□□□□□ -1.77
USP29Q9HBJ7 AL133173.2-201ENST00000614270 90 ntBASIC4□□□□□ -1.77
USP29Q9HBJ7 U73479.1-201ENST00000618062 168 ntBASIC4□□□□□ -1.77
USP29Q9HBJ7 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4□□□□□ -1.77
USP29Q9HBJ7 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4□□□□□ -1.77
USP29Q9HBJ7 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
USP29Q9HBJ7 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4□□□□□ -1.77
USP29Q9HBJ7 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4□□□□□ -1.77
USP29Q9HBJ7 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
USP29Q9HBJ7 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4□□□□□ -1.77
USP29Q9HBJ7 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
USP29Q9HBJ7 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
USP29Q9HBJ7 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4□□□□□ -1.77
USP29Q9HBJ7 MAPK10-372ENST00000641954 3413 ntBASIC3.99□□□□□ -1.77
USP29Q9HBJ7 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.99□□□□□ -1.77
USP29Q9HBJ7 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
USP29Q9HBJ7 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
USP29Q9HBJ7 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
USP29Q9HBJ7 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
USP29Q9HBJ7 RNY4P14-201ENST00000363656 96 ntBASIC3.99□□□□□ -1.77
USP29Q9HBJ7 Y_RNA.159-201ENST00000363674 87 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 132.5 ms