Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 RNU6-809P-201ENST00000384461 107 ntBASIC3.62□□□□□ -1.83
POLR1BQ9H9Y6 MTCYBP36-201ENST00000404146 440 ntBASIC3.62□□□□□ -1.83
POLR1BQ9H9Y6 RPL7P25-201ENST00000404151 721 ntBASIC3.62□□□□□ -1.83
POLR1BQ9H9Y6 RN7SKP285-201ENST00000410137 318 ntBASIC3.62□□□□□ -1.83
POLR1BQ9H9Y6 RPL21P32-201ENST00000419877 477 ntBASIC3.62□□□□□ -1.83
POLR1BQ9H9Y6 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.62□□□□□ -1.83
POLR1BQ9H9Y6 PPP1R11P2-201ENST00000423543 382 ntBASIC3.62□□□□□ -1.83
POLR1BQ9H9Y6 RPL27AP8-201ENST00000424277 446 ntBASIC3.62□□□□□ -1.83
POLR1BQ9H9Y6 AL353777.1-201ENST00000425552 326 ntBASIC3.62□□□□□ -1.83
POLR1BQ9H9Y6 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.62□□□□□ -1.83
POLR1BQ9H9Y6 RPL22P17-201ENST00000438729 315 ntBASIC3.62□□□□□ -1.83
POLR1BQ9H9Y6 AL662791.1-201ENST00000441992 928 ntBASIC3.62□□□□□ -1.83
POLR1BQ9H9Y6 KATNBL1P3-201ENST00000443475 909 ntBASIC3.62□□□□□ -1.83
POLR1BQ9H9Y6 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC3.62□□□□□ -1.83
POLR1BQ9H9Y6 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC3.62□□□□□ -1.83
POLR1BQ9H9Y6 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.62□□□□□ -1.83
POLR1BQ9H9Y6 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC3.62□□□□□ -1.83
POLR1BQ9H9Y6 RN7SKP289-201ENST00000517244 295 ntBASIC3.62□□□□□ -1.83
POLR1BQ9H9Y6 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC3.62□□□□□ -1.83
POLR1BQ9H9Y6 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.62□□□□□ -1.83
POLR1BQ9H9Y6 AL391156.1-201ENST00000554965 554 ntBASIC3.62□□□□□ -1.83
POLR1BQ9H9Y6 MED28P6-201ENST00000558776 231 ntBASIC3.62□□□□□ -1.83
POLR1BQ9H9Y6 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC3.62□□□□□ -1.83
POLR1BQ9H9Y6 MIR3921-201ENST00000577308 85 ntBASIC3.62□□□□□ -1.83
POLR1BQ9H9Y6 MIR5697-201ENST00000578045 78 ntBASIC3.62□□□□□ -1.83
POLR1BQ9H9Y6 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.62□□□□□ -1.83
POLR1BQ9H9Y6 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.62□□□□□ -1.83
POLR1BQ9H9Y6 AC068276.1-201ENST00000605793 379 ntBASIC3.62□□□□□ -1.83
POLR1BQ9H9Y6 OR2AS2P-201ENST00000606902 342 ntBASIC3.62□□□□□ -1.83
POLR1BQ9H9Y6 RMST_8.1-201ENST00000610287 165 ntBASIC3.62□□□□□ -1.83
POLR1BQ9H9Y6 AC138749.5-201ENST00000611461 208 ntBASIC3.62□□□□□ -1.83
POLR1BQ9H9Y6 AC073114.1-201ENST00000612027 490 ntBASIC3.62□□□□□ -1.83
POLR1BQ9H9Y6 AC027807.2-201ENST00000616099 408 ntBASIC3.62□□□□□ -1.83
POLR1BQ9H9Y6 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
POLR1BQ9H9Y6 AC116165.2-201ENST00000616705 206 ntBASIC3.62□□□□□ -1.83
POLR1BQ9H9Y6 AC012150.2-201ENST00000621300 544 ntBASIC3.62□□□□□ -1.83
POLR1BQ9H9Y6 Z69908.1-201ENST00000622603 247 ntBASIC3.62□□□□□ -1.83
POLR1BQ9H9Y6 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
POLR1BQ9H9Y6 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.62□□□□□ -1.83
POLR1BQ9H9Y6 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
POLR1BQ9H9Y6 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
POLR1BQ9H9Y6 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
POLR1BQ9H9Y6 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
POLR1BQ9H9Y6 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
POLR1BQ9H9Y6 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
POLR1BQ9H9Y6 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
POLR1BQ9H9Y6 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
POLR1BQ9H9Y6 AC092326.2-201ENST00000624772 1561 ntBASIC3.61□□□□□ -1.83
POLR1BQ9H9Y6 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
POLR1BQ9H9Y6 RNA5SP267-201ENST00000364893 126 ntBASIC3.61□□□□□ -1.83
POLR1BQ9H9Y6 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.61□□□□□ -1.83
POLR1BQ9H9Y6 DEFB109C-201ENST00000382575 264 ntBASIC3.61□□□□□ -1.83
POLR1BQ9H9Y6 DEFB109B-201ENST00000382656 264 ntBASIC3.61□□□□□ -1.83
POLR1BQ9H9Y6 RNU6-76P-201ENST00000384060 104 ntBASIC3.61□□□□□ -1.83
POLR1BQ9H9Y6 RNU6-432P-201ENST00000384196 109 ntBASIC3.61□□□□□ -1.83
POLR1BQ9H9Y6 RPS20P2-201ENST00000402520 389 ntBASIC3.61□□□□□ -1.83
POLR1BQ9H9Y6 Y_RNA.608-201ENST00000410647 95 ntBASIC3.61□□□□□ -1.83
POLR1BQ9H9Y6 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.61□□□□□ -1.83
POLR1BQ9H9Y6 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.61□□□□□ -1.83
POLR1BQ9H9Y6 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.61□□□□□ -1.83
POLR1BQ9H9Y6 AL049734.2-201ENST00000441066 616 ntBASIC3.61□□□□□ -1.83
POLR1BQ9H9Y6 USP9YP12-201ENST00000450481 570 ntBASIC3.61□□□□□ -1.83
POLR1BQ9H9Y6 HMGN2P16-201ENST00000456802 261 ntBASIC3.61□□□□□ -1.83
POLR1BQ9H9Y6 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC3.61□□□□□ -1.83
POLR1BQ9H9Y6 RNU7-59P-201ENST00000459101 61 ntBASIC3.61□□□□□ -1.83
POLR1BQ9H9Y6 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.61□□□□□ -1.83
POLR1BQ9H9Y6 RPS3AP50-201ENST00000487064 803 ntBASIC3.61□□□□□ -1.83
POLR1BQ9H9Y6 AC055855.1-201ENST00000489563 579 ntBASIC3.61□□□□□ -1.83
POLR1BQ9H9Y6 TRBV12-2-201ENST00000489763 344 ntBASIC3.61□□□□□ -1.83
POLR1BQ9H9Y6 AC026784.1-201ENST00000507986 352 ntBASIC3.61□□□□□ -1.83
POLR1BQ9H9Y6 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC3.61□□□□□ -1.83
POLR1BQ9H9Y6 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.61□□□□□ -1.83
POLR1BQ9H9Y6 AC022878.1-201ENST00000530684 149 ntBASIC3.61□□□□□ -1.83
POLR1BQ9H9Y6 AP000907.2-201ENST00000530827 353 ntBASIC3.61□□□□□ -1.83
POLR1BQ9H9Y6 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC3.61□□□□□ -1.83
POLR1BQ9H9Y6 OR4T1P-201ENST00000554933 911 ntBASIC3.61□□□□□ -1.83
POLR1BQ9H9Y6 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.61□□□□□ -1.83
POLR1BQ9H9Y6 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC3.61□□□□□ -1.83
POLR1BQ9H9Y6 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.61□□□□□ -1.83
POLR1BQ9H9Y6 COX6CP3-201ENST00000580869 223 ntBASIC3.61□□□□□ -1.83
POLR1BQ9H9Y6 BDH2P1-201ENST00000602288 736 ntBASIC3.61□□□□□ -1.83
POLR1BQ9H9Y6 AC005000.2-201ENST00000605468 310 ntBASIC3.61□□□□□ -1.83
POLR1BQ9H9Y6 AL158063.1-201ENST00000615349 536 ntBASIC3.61□□□□□ -1.83
POLR1BQ9H9Y6 AL603758.1-201ENST00000618654 241 ntBASIC3.61□□□□□ -1.83
POLR1BQ9H9Y6 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
POLR1BQ9H9Y6 AC019226.1-201ENST00000625666 515 ntBASIC3.61□□□□□ -1.83
POLR1BQ9H9Y6 U6.98-201ENST00000637157 84 ntBASIC3.61□□□□□ -1.83
POLR1BQ9H9Y6 AL392088.2-201ENST00000637607 285 ntBASIC3.61□□□□□ -1.83
POLR1BQ9H9Y6 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
POLR1BQ9H9Y6 AL049781.1-201ENST00000623195 3585 ntBASIC3.61□□□□□ -1.83
POLR1BQ9H9Y6 AL513185.3-201ENST00000433335 1300 ntBASIC3.61□□□□□ -1.83
POLR1BQ9H9Y6 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.61□□□□□ -1.83
POLR1BQ9H9Y6 AP001148.1-201ENST00000624124 2359 ntBASIC3.61□□□□□ -1.83
POLR1BQ9H9Y6 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
POLR1BQ9H9Y6 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.6□□□□□ -1.83
POLR1BQ9H9Y6 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
POLR1BQ9H9Y6 SDAD1P2-201ENST00000441308 2028 ntBASIC3.6□□□□□ -1.83
POLR1BQ9H9Y6 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
POLR1BQ9H9Y6 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
POLR1BQ9H9Y6 RNU5E-8P-201ENST00000363502 116 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms