Protein–RNA interactions for Protein: Q9H6T3

RPAP3, RNA polymerase II-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3Q9H6T3 COX6CP2-201ENST00000444980 225 ntBASIC3.23□□□□□ -1.89
RPAP3Q9H6T3 AP000936.2-201ENST00000447151 681 ntBASIC3.23□□□□□ -1.89
RPAP3Q9H6T3 MTCYBP11-201ENST00000447254 1109 ntBASIC3.23□□□□□ -1.89
RPAP3Q9H6T3 RPL39P6-201ENST00000448289 150 ntBASIC3.23□□□□□ -1.89
RPAP3Q9H6T3 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC3.23□□□□□ -1.89
RPAP3Q9H6T3 AC096751.1-202ENST00000502691 1067 ntBASIC3.23□□□□□ -1.89
RPAP3Q9H6T3 MTCYBP17-201ENST00000503579 789 ntBASIC3.23□□□□□ -1.89
RPAP3Q9H6T3 KCTD9P5-201ENST00000504141 1170 ntBASIC3.23□□□□□ -1.89
RPAP3Q9H6T3 SNORA31.8-201ENST00000516327 108 ntBASIC3.23□□□□□ -1.89
RPAP3Q9H6T3 AC087373.1-201ENST00000524920 491 ntBASIC3.23□□□□□ -1.89
RPAP3Q9H6T3 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.23□□□□□ -1.89
RPAP3Q9H6T3 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.23□□□□□ -1.89
RPAP3Q9H6T3 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC3.23□□□□□ -1.89
RPAP3Q9H6T3 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.23□□□□□ -1.89
RPAP3Q9H6T3 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.23□□□□□ -1.89
RPAP3Q9H6T3 AL136370.1-201ENST00000608166 691 ntBASIC3.23□□□□□ -1.89
RPAP3Q9H6T3 AC013412.1-201ENST00000610687 192 ntBASIC3.23□□□□□ -1.89
RPAP3Q9H6T3 AL138478.1-201ENST00000612252 832 ntBASIC3.23□□□□□ -1.89
RPAP3Q9H6T3 AL121895.2-201ENST00000619558 447 ntBASIC3.23□□□□□ -1.89
RPAP3Q9H6T3 AC010608.3-201ENST00000625048 527 ntBASIC3.23□□□□□ -1.89
RPAP3Q9H6T3 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.23□□□□□ -1.89
RPAP3Q9H6T3 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.23□□□□□ -1.89
RPAP3Q9H6T3 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.22□□□□□ -1.89
RPAP3Q9H6T3 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
RPAP3Q9H6T3 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.22□□□□□ -1.89
RPAP3Q9H6T3 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.22□□□□□ -1.89
RPAP3Q9H6T3 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
RPAP3Q9H6T3 AL672167.1-206ENST00000356293 943 ntBASIC3.22□□□□□ -1.89
RPAP3Q9H6T3 RNU6-878P-201ENST00000384578 110 ntBASIC3.22□□□□□ -1.89
RPAP3Q9H6T3 RNU2-47P-201ENST00000410649 186 ntBASIC3.22□□□□□ -1.89
RPAP3Q9H6T3 RNA5SP21-201ENST00000410917 96 ntBASIC3.22□□□□□ -1.89
RPAP3Q9H6T3 RNA5SP344-201ENST00000411081 104 ntBASIC3.22□□□□□ -1.89
RPAP3Q9H6T3 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.22□□□□□ -1.89
RPAP3Q9H6T3 NANOGP2-201ENST00000435391 727 ntBASIC3.22□□□□□ -1.89
RPAP3Q9H6T3 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.22□□□□□ -1.89
RPAP3Q9H6T3 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC3.22□□□□□ -1.89
RPAP3Q9H6T3 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.22□□□□□ -1.89
RPAP3Q9H6T3 UQCRHP3-201ENST00000451503 251 ntBASIC3.22□□□□□ -1.89
RPAP3Q9H6T3 AL031183.1-201ENST00000457667 207 ntBASIC3.22□□□□□ -1.89
RPAP3Q9H6T3 AC146507.2-201ENST00000460608 476 ntBASIC3.22□□□□□ -1.89
RPAP3Q9H6T3 AC117522.3-201ENST00000507974 584 ntBASIC3.22□□□□□ -1.89
RPAP3Q9H6T3 AC008837.2-201ENST00000513076 418 ntBASIC3.22□□□□□ -1.89
RPAP3Q9H6T3 RNU4-29P-201ENST00000515943 174 ntBASIC3.22□□□□□ -1.89
RPAP3Q9H6T3 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.22□□□□□ -1.89
RPAP3Q9H6T3 NBEAP1-201ENST00000554452 979 ntBASIC3.22□□□□□ -1.89
RPAP3Q9H6T3 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC3.22□□□□□ -1.89
RPAP3Q9H6T3 AC010738.1-201ENST00000604970 987 ntBASIC3.22□□□□□ -1.89
RPAP3Q9H6T3 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC3.22□□□□□ -1.89
RPAP3Q9H6T3 LINC02211-204ENST00000642024 1070 ntBASIC3.22□□□□□ -1.89
RPAP3Q9H6T3 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
RPAP3Q9H6T3 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
RPAP3Q9H6T3 AC011460.1-201ENST00000636268 1834 ntBASIC3.21□□□□□ -1.89
RPAP3Q9H6T3 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
RPAP3Q9H6T3 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.21□□□□□ -1.9
RPAP3Q9H6T3 MIR148B-201ENST00000362252 99 ntBASIC3.21□□□□□ -1.9
RPAP3Q9H6T3 RNU1-35P-201ENST00000362782 153 ntBASIC3.21□□□□□ -1.9
RPAP3Q9H6T3 FO393413.1-201ENST00000402892 195 ntBASIC3.21□□□□□ -1.9
RPAP3Q9H6T3 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.21□□□□□ -1.9
RPAP3Q9H6T3 RN7SKP58-201ENST00000411010 305 ntBASIC3.21□□□□□ -1.9
RPAP3Q9H6T3 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.21□□□□□ -1.9
RPAP3Q9H6T3 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC3.21□□□□□ -1.9
RPAP3Q9H6T3 AC099677.1-201ENST00000420575 175 ntBASIC3.21□□□□□ -1.9
RPAP3Q9H6T3 HMGN2P30-201ENST00000423237 256 ntBASIC3.21□□□□□ -1.9
RPAP3Q9H6T3 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
RPAP3Q9H6T3 RPL23AP76-201ENST00000441860 458 ntBASIC3.21□□□□□ -1.9
RPAP3Q9H6T3 EXOSC3P1-201ENST00000448649 500 ntBASIC3.21□□□□□ -1.9
RPAP3Q9H6T3 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC3.21□□□□□ -1.9
RPAP3Q9H6T3 snoU109.3-201ENST00000459477 145 ntBASIC3.21□□□□□ -1.9
RPAP3Q9H6T3 RPS15AP17-201ENST00000470598 390 ntBASIC3.21□□□□□ -1.9
RPAP3Q9H6T3 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.21□□□□□ -1.9
RPAP3Q9H6T3 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.21□□□□□ -1.9
RPAP3Q9H6T3 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
RPAP3Q9H6T3 CA1-215ENST00000522389 551 ntTSL 3 BASIC3.21□□□□□ -1.9
RPAP3Q9H6T3 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC3.21□□□□□ -1.9
RPAP3Q9H6T3 SNRPGP16-201ENST00000533275 226 ntBASIC3.21□□□□□ -1.9
RPAP3Q9H6T3 AC018630.1-201ENST00000541376 925 ntBASIC3.21□□□□□ -1.9
RPAP3Q9H6T3 MTCYBP23-201ENST00000558717 1102 ntBASIC3.21□□□□□ -1.9
RPAP3Q9H6T3 AC020895.1-201ENST00000595362 272 ntBASIC3.21□□□□□ -1.9
RPAP3Q9H6T3 AC116312.1-201ENST00000606841 314 ntBASIC3.21□□□□□ -1.9
RPAP3Q9H6T3 AC022306.3-201ENST00000619930 550 ntBASIC3.21□□□□□ -1.9
RPAP3Q9H6T3 LRRC77P-213ENST00000637727 880 ntBASIC3.21□□□□□ -1.9
RPAP3Q9H6T3 AL445984.1-201ENST00000637834 659 ntBASIC3.21□□□□□ -1.9
RPAP3Q9H6T3 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
RPAP3Q9H6T3 CDR1-202ENST00000625883 1485 ntBASIC3.21□□□□□ -1.9
RPAP3Q9H6T3 AC092593.1-201ENST00000515413 1815 ntBASIC3.21□□□□□ -1.9
RPAP3Q9H6T3 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
RPAP3Q9H6T3 U3.12-201ENST00000364498 214 ntBASIC3.2□□□□□ -1.9
RPAP3Q9H6T3 MIR512-1-201ENST00000384913 84 ntBASIC3.2□□□□□ -1.9
RPAP3Q9H6T3 AL445529.1-201ENST00000398713 389 ntBASIC3.2□□□□□ -1.9
RPAP3Q9H6T3 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.2□□□□□ -1.9
RPAP3Q9H6T3 OR2AS1P-201ENST00000427827 319 ntBASIC3.2□□□□□ -1.9
RPAP3Q9H6T3 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC3.2□□□□□ -1.9
RPAP3Q9H6T3 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC3.2□□□□□ -1.9
RPAP3Q9H6T3 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
RPAP3Q9H6T3 RPL21P41-201ENST00000459863 264 ntBASIC3.2□□□□□ -1.9
RPAP3Q9H6T3 AC026410.2-201ENST00000460281 156 ntBASIC3.2□□□□□ -1.9
RPAP3Q9H6T3 AC104164.3-201ENST00000467363 1258 ntBASIC3.2□□□□□ -1.9
RPAP3Q9H6T3 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.2□□□□□ -1.9
RPAP3Q9H6T3 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC3.2□□□□□ -1.9
RPAP3Q9H6T3 TMEM251P1-201ENST00000503717 318 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms