Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
RNF41Q9H4P4 AL390862.1-201ENST00000635467 1469 ntBASIC3.16□□□□□ -1.9
RNF41Q9H4P4 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.15□□□□□ -1.9
RNF41Q9H4P4 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
RNF41Q9H4P4 AC062016.1-201ENST00000355719 319 ntBASIC3.15□□□□□ -1.91
RNF41Q9H4P4 MIR634-201ENST00000385208 97 ntBASIC3.15□□□□□ -1.91
RNF41Q9H4P4 RNU6-821P-201ENST00000390995 107 ntBASIC3.15□□□□□ -1.91
RNF41Q9H4P4 MTND4P13-201ENST00000402078 1023 ntBASIC3.15□□□□□ -1.91
RNF41Q9H4P4 RNU6-757P-201ENST00000410334 100 ntBASIC3.15□□□□□ -1.91
RNF41Q9H4P4 RN7SKP123-201ENST00000410732 291 ntBASIC3.15□□□□□ -1.91
RNF41Q9H4P4 RNA5SP184-201ENST00000411071 108 ntBASIC3.15□□□□□ -1.91
RNF41Q9H4P4 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC3.15□□□□□ -1.91
RNF41Q9H4P4 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.15□□□□□ -1.91
RNF41Q9H4P4 NEK4P1-201ENST00000433383 879 ntBASIC3.15□□□□□ -1.91
RNF41Q9H4P4 AL590103.1-201ENST00000434488 307 ntBASIC3.15□□□□□ -1.91
RNF41Q9H4P4 RPL23AP74-201ENST00000437246 471 ntBASIC3.15□□□□□ -1.91
RNF41Q9H4P4 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC3.15□□□□□ -1.91
RNF41Q9H4P4 GAPDHP27-201ENST00000447427 1020 ntBASIC3.15□□□□□ -1.91
RNF41Q9H4P4 RPS20P24-201ENST00000457473 361 ntBASIC3.15□□□□□ -1.91
RNF41Q9H4P4 MTND1P16-201ENST00000465177 898 ntBASIC3.15□□□□□ -1.91
RNF41Q9H4P4 RPL7P18-201ENST00000478965 734 ntBASIC3.15□□□□□ -1.91
RNF41Q9H4P4 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC3.15□□□□□ -1.91
RNF41Q9H4P4 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.15□□□□□ -1.91
RNF41Q9H4P4 XKRY-201ENST00000510392 1100 ntBASIC3.15□□□□□ -1.91
RNF41Q9H4P4 AC010587.2-201ENST00000511727 448 ntBASIC3.15□□□□□ -1.91
RNF41Q9H4P4 AC096725.1-201ENST00000514266 313 ntBASIC3.15□□□□□ -1.91
RNF41Q9H4P4 RNU6-27P-201ENST00000516146 107 ntBASIC3.15□□□□□ -1.91
RNF41Q9H4P4 OR5AK1P-201ENST00000524837 922 ntBASIC3.15□□□□□ -1.91
RNF41Q9H4P4 DEFB131D-201ENST00000526803 184 ntBASIC3.15□□□□□ -1.91
RNF41Q9H4P4 MTCYBP41-201ENST00000528913 1123 ntBASIC3.15□□□□□ -1.91
RNF41Q9H4P4 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC3.15□□□□□ -1.91
RNF41Q9H4P4 AC023538.1-201ENST00000534576 736 ntBASIC3.15□□□□□ -1.91
RNF41Q9H4P4 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC3.15□□□□□ -1.91
RNF41Q9H4P4 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
RNF41Q9H4P4 DUXAP1-201ENST00000556632 463 ntBASIC3.15□□□□□ -1.91
RNF41Q9H4P4 AC087465.1-201ENST00000560574 245 ntBASIC3.15□□□□□ -1.91
RNF41Q9H4P4 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC3.15□□□□□ -1.91
RNF41Q9H4P4 MIR3690-201ENST00000580266 75 ntBASIC3.15□□□□□ -1.91
RNF41Q9H4P4 MIR4635-201ENST00000583759 79 ntBASIC3.15□□□□□ -1.91
RNF41Q9H4P4 VN1R78P-201ENST00000597393 564 ntBASIC3.15□□□□□ -1.91
RNF41Q9H4P4 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC3.15□□□□□ -1.91
RNF41Q9H4P4 AC103881.1-201ENST00000603476 538 ntBASIC3.15□□□□□ -1.91
RNF41Q9H4P4 DPRXP5-201ENST00000604662 539 ntBASIC3.15□□□□□ -1.91
RNF41Q9H4P4 AL035413.2-201ENST00000604801 525 ntBASIC3.15□□□□□ -1.91
RNF41Q9H4P4 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC3.15□□□□□ -1.91
RNF41Q9H4P4 AC107871.2-201ENST00000612894 502 ntBASIC3.15□□□□□ -1.91
RNF41Q9H4P4 AL139418.1-201ENST00000613613 177 ntBASIC3.15□□□□□ -1.91
RNF41Q9H4P4 U73479.1-201ENST00000618062 168 ntBASIC3.15□□□□□ -1.91
RNF41Q9H4P4 AP002782.1-201ENST00000623107 614 ntBASIC3.15□□□□□ -1.91
RNF41Q9H4P4 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC3.15□□□□□ -1.91
RNF41Q9H4P4 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
RNF41Q9H4P4 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
RNF41Q9H4P4 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
RNF41Q9H4P4 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
RNF41Q9H4P4 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.14□□□□□ -1.91
RNF41Q9H4P4 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
RNF41Q9H4P4 SNORA7.2-201ENST00000364446 145 ntBASIC3.14□□□□□ -1.91
RNF41Q9H4P4 RNU6-1122P-201ENST00000384449 107 ntBASIC3.14□□□□□ -1.91
RNF41Q9H4P4 MIR23A-201ENST00000385245 73 ntBASIC3.14□□□□□ -1.91
RNF41Q9H4P4 AL138880.1-201ENST00000405824 642 ntBASIC3.14□□□□□ -1.91
RNF41Q9H4P4 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC3.14□□□□□ -1.91
RNF41Q9H4P4 EI24P1-201ENST00000416584 867 ntBASIC3.14□□□□□ -1.91
RNF41Q9H4P4 NUP35P1-201ENST00000422734 947 ntBASIC3.14□□□□□ -1.91
RNF41Q9H4P4 AC007742.1-201ENST00000425789 329 ntBASIC3.14□□□□□ -1.91
RNF41Q9H4P4 ELOCP26-201ENST00000436067 329 ntBASIC3.14□□□□□ -1.91
RNF41Q9H4P4 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.14□□□□□ -1.91
RNF41Q9H4P4 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.14□□□□□ -1.91
RNF41Q9H4P4 MTND3P1-201ENST00000441336 220 ntBASIC3.14□□□□□ -1.91
RNF41Q9H4P4 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.14□□□□□ -1.91
RNF41Q9H4P4 AP000936.2-201ENST00000447151 681 ntBASIC3.14□□□□□ -1.91
RNF41Q9H4P4 AC005297.2-201ENST00000450430 606 ntBASIC3.14□□□□□ -1.91
RNF41Q9H4P4 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC3.14□□□□□ -1.91
RNF41Q9H4P4 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.14□□□□□ -1.91
RNF41Q9H4P4 AC103975.1-201ENST00000482506 483 ntBASIC3.14□□□□□ -1.91
RNF41Q9H4P4 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.14□□□□□ -1.91
RNF41Q9H4P4 AC006483.1-201ENST00000487308 313 ntBASIC3.14□□□□□ -1.91
RNF41Q9H4P4 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC3.14□□□□□ -1.91
RNF41Q9H4P4 AC114981.1-201ENST00000503897 678 ntBASIC3.14□□□□□ -1.91
RNF41Q9H4P4 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.14□□□□□ -1.91
RNF41Q9H4P4 AC034244.1-201ENST00000507687 207 ntBASIC3.14□□□□□ -1.91
RNF41Q9H4P4 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.14□□□□□ -1.91
RNF41Q9H4P4 RN7SKP287-201ENST00000516546 266 ntBASIC3.14□□□□□ -1.91
RNF41Q9H4P4 RPL12P22-201ENST00000519073 490 ntBASIC3.14□□□□□ -1.91
RNF41Q9H4P4 SYF2P1-201ENST00000550658 413 ntBASIC3.14□□□□□ -1.91
RNF41Q9H4P4 EEF1B2P4-201ENST00000551398 348 ntBASIC3.14□□□□□ -1.91
RNF41Q9H4P4 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
RNF41Q9H4P4 AL512347.1-201ENST00000566420 503 ntBASIC3.14□□□□□ -1.91
RNF41Q9H4P4 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.14□□□□□ -1.91
RNF41Q9H4P4 MAGOH2P-202ENST00000584384 429 ntBASIC3.14□□□□□ -1.91
RNF41Q9H4P4 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.14□□□□□ -1.91
RNF41Q9H4P4 AC009220.3-201ENST00000604318 586 ntBASIC3.14□□□□□ -1.91
RNF41Q9H4P4 AL592221.1-201ENST00000605266 382 ntBASIC3.14□□□□□ -1.91
RNF41Q9H4P4 AC004009.2-201ENST00000623016 728 ntBASIC3.14□□□□□ -1.91
RNF41Q9H4P4 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.14□□□□□ -1.91
RNF41Q9H4P4 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
RNF41Q9H4P4 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
RNF41Q9H4P4 AL079343.1-201ENST00000572358 1771 ntBASIC3.13□□□□□ -1.91
RNF41Q9H4P4 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.13□□□□□ -1.91
RNF41Q9H4P4 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
RNF41Q9H4P4 FAM133CP-201ENST00000332869 704 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms