Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 MIR200C-201ENST00000384980 68 ntBASIC2.08□□□□□ -2.08
VCX3BQ9H321 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
VCX3BQ9H321 AL360182.1-201ENST00000397433 468 ntBASIC2.08□□□□□ -2.08
VCX3BQ9H321 ATP5F1P6-201ENST00000402768 767 ntBASIC2.08□□□□□ -2.08
VCX3BQ9H321 SUMO2P12-201ENST00000405924 140 ntBASIC2.08□□□□□ -2.08
VCX3BQ9H321 RPS7P9-201ENST00000414704 586 ntBASIC2.08□□□□□ -2.08
VCX3BQ9H321 PNRC2P1-201ENST00000423940 420 ntBASIC2.08□□□□□ -2.08
VCX3BQ9H321 AL035410.1-201ENST00000427409 427 ntBASIC2.08□□□□□ -2.08
VCX3BQ9H321 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC2.08□□□□□ -2.08
VCX3BQ9H321 RAB11AP1-201ENST00000442978 646 ntBASIC2.08□□□□□ -2.08
VCX3BQ9H321 RPS3AP12-201ENST00000443616 753 ntBASIC2.08□□□□□ -2.08
VCX3BQ9H321 RPL21P133-201ENST00000443666 476 ntBASIC2.08□□□□□ -2.08
VCX3BQ9H321 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC2.08□□□□□ -2.08
VCX3BQ9H321 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC2.08□□□□□ -2.08
VCX3BQ9H321 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.08□□□□□ -2.08
VCX3BQ9H321 DNAJC19P8-201ENST00000452887 259 ntBASIC2.08□□□□□ -2.08
VCX3BQ9H321 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
VCX3BQ9H321 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
VCX3BQ9H321 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
VCX3BQ9H321 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.08□□□□□ -2.08
VCX3BQ9H321 AC104108.1-201ENST00000509930 412 ntBASIC2.08□□□□□ -2.08
VCX3BQ9H321 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.08□□□□□ -2.08
VCX3BQ9H321 AL359273.1-201ENST00000510918 627 ntBASIC2.08□□□□□ -2.08
VCX3BQ9H321 RN7SKP157-201ENST00000516174 282 ntBASIC2.08□□□□□ -2.08
VCX3BQ9H321 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.08□□□□□ -2.08
VCX3BQ9H321 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC2.08□□□□□ -2.08
VCX3BQ9H321 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC2.08□□□□□ -2.08
VCX3BQ9H321 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC2.08□□□□□ -2.08
VCX3BQ9H321 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.08□□□□□ -2.08
VCX3BQ9H321 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC2.08□□□□□ -2.08
VCX3BQ9H321 AL022099.1-201ENST00000604551 712 ntBASIC2.08□□□□□ -2.08
VCX3BQ9H321 BX322635.1-201ENST00000605804 496 ntBASIC2.08□□□□□ -2.08
VCX3BQ9H321 AC084757.4-201ENST00000616350 526 ntBASIC2.08□□□□□ -2.08
VCX3BQ9H321 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.08□□□□□ -2.08
VCX3BQ9H321 AC010872.1-201ENST00000624225 675 ntBASIC2.08□□□□□ -2.08
VCX3BQ9H321 AC092608.2-201ENST00000624427 218 ntBASIC2.08□□□□□ -2.08
VCX3BQ9H321 AP003400.6-201ENST00000624698 740 ntBASIC2.08□□□□□ -2.08
VCX3BQ9H321 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.08□□□□□ -2.08
VCX3BQ9H321 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
VCX3BQ9H321 MTCO1P18-201ENST00000455518 1419 ntBASIC2.08□□□□□ -2.08
VCX3BQ9H321 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.07□□□□□ -2.08
VCX3BQ9H321 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.07□□□□□ -2.08
VCX3BQ9H321 RNU6-1339P-201ENST00000363574 91 ntBASIC2.07□□□□□ -2.08
VCX3BQ9H321 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
VCX3BQ9H321 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
VCX3BQ9H321 HMGB1P11-201ENST00000413899 637 ntBASIC2.07□□□□□ -2.08
VCX3BQ9H321 CYCSP48-201ENST00000417124 323 ntBASIC2.07□□□□□ -2.08
VCX3BQ9H321 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC2.07□□□□□ -2.08
VCX3BQ9H321 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC2.07□□□□□ -2.08
VCX3BQ9H321 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.07□□□□□ -2.08
VCX3BQ9H321 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.07□□□□□ -2.08
VCX3BQ9H321 RPL23AP83-201ENST00000434984 473 ntBASIC2.07□□□□□ -2.08
VCX3BQ9H321 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC2.07□□□□□ -2.08
VCX3BQ9H321 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC2.07□□□□□ -2.08
VCX3BQ9H321 ANKRD30BP3-201ENST00000444850 1070 ntBASIC2.07□□□□□ -2.08
VCX3BQ9H321 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC2.07□□□□□ -2.08
VCX3BQ9H321 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.07□□□□□ -2.08
VCX3BQ9H321 RPS27P23-201ENST00000487608 251 ntBASIC2.07□□□□□ -2.08
VCX3BQ9H321 CEACAMP10-202ENST00000495431 496 ntBASIC2.07□□□□□ -2.08
VCX3BQ9H321 AC026801.1-201ENST00000497178 464 ntBASIC2.07□□□□□ -2.08
VCX3BQ9H321 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC2.07□□□□□ -2.08
VCX3BQ9H321 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC2.07□□□□□ -2.08
VCX3BQ9H321 RNU2-19P-201ENST00000517288 84 ntBASIC2.07□□□□□ -2.08
VCX3BQ9H321 OR4P1P-201ENST00000530808 1136 ntBASIC2.07□□□□□ -2.08
VCX3BQ9H321 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC2.07□□□□□ -2.08
VCX3BQ9H321 AC079600.2-201ENST00000550076 130 ntBASIC2.07□□□□□ -2.08
VCX3BQ9H321 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.07□□□□□ -2.08
VCX3BQ9H321 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC2.07□□□□□ -2.08
VCX3BQ9H321 AC067805.1-201ENST00000559344 470 ntBASIC2.07□□□□□ -2.08
VCX3BQ9H321 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.07□□□□□ -2.08
VCX3BQ9H321 LRRC37A5P-203ENST00000580181 585 ntBASIC2.07□□□□□ -2.08
VCX3BQ9H321 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.07□□□□□ -2.08
VCX3BQ9H321 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.07□□□□□ -2.08
VCX3BQ9H321 ATP5A1P2-202ENST00000616464 443 ntBASIC2.07□□□□□ -2.08
VCX3BQ9H321 FRG1HP-204ENST00000617940 757 ntBASIC2.07□□□□□ -2.08
VCX3BQ9H321 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
VCX3BQ9H321 MIR6132-201ENST00000622083 109 ntBASIC2.07□□□□□ -2.08
VCX3BQ9H321 AC093591.3-201ENST00000634516 308 ntBASIC2.07□□□□□ -2.08
VCX3BQ9H321 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
VCX3BQ9H321 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
VCX3BQ9H321 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.07□□□□□ -2.08
VCX3BQ9H321 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.07□□□□□ -2.08
VCX3BQ9H321 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
VCX3BQ9H321 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.07□□□□□ -2.08
VCX3BQ9H321 SEC63P2-201ENST00000503863 1939 ntBASIC2.07□□□□□ -2.08
VCX3BQ9H321 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.06□□□□□ -2.08
VCX3BQ9H321 SNORA67.4-201ENST00000384688 142 ntBASIC2.06□□□□□ -2.08
VCX3BQ9H321 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
VCX3BQ9H321 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
VCX3BQ9H321 MIR1290-201ENST00000408735 78 ntBASIC2.06□□□□□ -2.08
VCX3BQ9H321 UBE2V1P11-201ENST00000411559 285 ntBASIC2.06□□□□□ -2.08
VCX3BQ9H321 HMGN2P19-201ENST00000425149 265 ntBASIC2.06□□□□□ -2.08
VCX3BQ9H321 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.06□□□□□ -2.08
VCX3BQ9H321 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC2.06□□□□□ -2.08
VCX3BQ9H321 RPS26P30-201ENST00000443431 335 ntBASIC2.06□□□□□ -2.08
VCX3BQ9H321 AC124916.1-201ENST00000444020 547 ntBASIC2.06□□□□□ -2.08
VCX3BQ9H321 VPS26AP1-201ENST00000483197 979 ntBASIC2.06□□□□□ -2.08
VCX3BQ9H321 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
VCX3BQ9H321 SCARNA17.1-201ENST00000516211 143 ntBASIC2.06□□□□□ -2.08
VCX3BQ9H321 RNA5SP320-201ENST00000516263 124 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms