Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 RNA5SP338-201ENST00000410495 85 ntBASIC1.92□□□□□ -2.1
NKX6-2Q9C056 RNU4-72P-201ENST00000410754 173 ntBASIC1.92□□□□□ -2.1
NKX6-2Q9C056 RNU2-40P-201ENST00000410833 196 ntBASIC1.92□□□□□ -2.1
NKX6-2Q9C056 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC1.92□□□□□ -2.1
NKX6-2Q9C056 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.92□□□□□ -2.1
NKX6-2Q9C056 AC087499.2-201ENST00000432861 149 ntBASIC1.92□□□□□ -2.1
NKX6-2Q9C056 RPL26P6-201ENST00000440913 438 ntBASIC1.92□□□□□ -2.1
NKX6-2Q9C056 AC104389.3-201ENST00000445629 235 ntBASIC1.92□□□□□ -2.1
NKX6-2Q9C056 VN1R10P-201ENST00000447106 875 ntBASIC1.92□□□□□ -2.1
NKX6-2Q9C056 AL358232.1-201ENST00000448030 501 ntBASIC1.92□□□□□ -2.1
NKX6-2Q9C056 COX6CP18-201ENST00000448769 222 ntBASIC1.92□□□□□ -2.1
NKX6-2Q9C056 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
NKX6-2Q9C056 RPS4XP10-201ENST00000465034 731 ntBASIC1.92□□□□□ -2.1
NKX6-2Q9C056 AC092757.1-201ENST00000467293 467 ntBASIC1.92□□□□□ -2.1
NKX6-2Q9C056 AL135752.1-201ENST00000479477 471 ntBASIC1.92□□□□□ -2.1
NKX6-2Q9C056 RPS27P21-201ENST00000486977 252 ntBASIC1.92□□□□□ -2.1
NKX6-2Q9C056 AC008427.1-201ENST00000503102 655 ntBASIC1.92□□□□□ -2.1
NKX6-2Q9C056 NDUFS5P6-201ENST00000529136 295 ntBASIC1.92□□□□□ -2.1
NKX6-2Q9C056 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC1.92□□□□□ -2.1
NKX6-2Q9C056 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC1.92□□□□□ -2.1
NKX6-2Q9C056 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC1.92□□□□□ -2.1
NKX6-2Q9C056 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC1.92□□□□□ -2.1
NKX6-2Q9C056 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC1.92□□□□□ -2.1
NKX6-2Q9C056 HMGB1P6-201ENST00000569046 646 ntBASIC1.92□□□□□ -2.1
NKX6-2Q9C056 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC1.92□□□□□ -2.1
NKX6-2Q9C056 AL121917.1-203ENST00000605534 577 ntBASIC1.92□□□□□ -2.1
NKX6-2Q9C056 DUXAP10-204ENST00000612052 616 ntBASIC1.92□□□□□ -2.1
NKX6-2Q9C056 AL592148.2-201ENST00000612210 372 ntBASIC1.92□□□□□ -2.1
NKX6-2Q9C056 AC020658.4-201ENST00000613987 684 ntBASIC1.92□□□□□ -2.1
NKX6-2Q9C056 MIR8084-201ENST00000614105 89 ntBASIC1.92□□□□□ -2.1
NKX6-2Q9C056 AC025588.4-201ENST00000615802 908 ntBASIC1.92□□□□□ -2.1
NKX6-2Q9C056 AC009090.3-201ENST00000616553 565 ntBASIC1.92□□□□□ -2.1
NKX6-2Q9C056 AL445493.3-201ENST00000619568 477 ntBASIC1.92□□□□□ -2.1
NKX6-2Q9C056 AC026634.1-201ENST00000634369 198 ntBASIC1.92□□□□□ -2.1
NKX6-2Q9C056 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.92□□□□□ -2.1
NKX6-2Q9C056 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
NKX6-2Q9C056 KPNA2P1-201ENST00000458289 1591 ntBASIC1.92□□□□□ -2.1
NKX6-2Q9C056 DBF4P1-201ENST00000412976 1892 ntBASIC1.92□□□□□ -2.1
NKX6-2Q9C056 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.91□□□□□ -2.1
NKX6-2Q9C056 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
NKX6-2Q9C056 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.91□□□□□ -2.1
NKX6-2Q9C056 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
NKX6-2Q9C056 RNU1-140P-201ENST00000365040 165 ntBASIC1.91□□□□□ -2.1
NKX6-2Q9C056 NPM1P10-201ENST00000398310 865 ntBASIC1.91□□□□□ -2.1
NKX6-2Q9C056 BX664727.1-201ENST00000416024 466 ntBASIC1.91□□□□□ -2.1
NKX6-2Q9C056 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.91□□□□□ -2.1
NKX6-2Q9C056 MTCYBP32-201ENST00000427945 1084 ntBASIC1.91□□□□□ -2.1
NKX6-2Q9C056 AL512637.2-201ENST00000431287 1256 ntBASIC1.91□□□□□ -2.1
NKX6-2Q9C056 MYL8P-204ENST00000431574 518 ntBASIC1.91□□□□□ -2.1
NKX6-2Q9C056 AL512844.2-201ENST00000433990 593 ntBASIC1.91□□□□□ -2.1
NKX6-2Q9C056 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC1.91□□□□□ -2.1
NKX6-2Q9C056 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
NKX6-2Q9C056 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC1.91□□□□□ -2.1
NKX6-2Q9C056 AC092798.1-201ENST00000458542 409 ntBASIC1.91□□□□□ -2.1
NKX6-2Q9C056 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC1.91□□□□□ -2.1
NKX6-2Q9C056 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC1.91□□□□□ -2.1
NKX6-2Q9C056 RPL31P41-201ENST00000477967 372 ntBASIC1.91□□□□□ -2.1
NKX6-2Q9C056 SETP6-201ENST00000479329 568 ntBASIC1.91□□□□□ -2.1
NKX6-2Q9C056 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC1.91□□□□□ -2.1
NKX6-2Q9C056 COX7A2P2-201ENST00000505291 250 ntBASIC1.91□□□□□ -2.1
NKX6-2Q9C056 AC026427.2-201ENST00000506228 536 ntBASIC1.91□□□□□ -2.1
NKX6-2Q9C056 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC1.91□□□□□ -2.1
NKX6-2Q9C056 AC096725.1-201ENST00000514266 313 ntBASIC1.91□□□□□ -2.1
NKX6-2Q9C056 AC026616.1-201ENST00000523157 525 ntBASIC1.91□□□□□ -2.1
NKX6-2Q9C056 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC1.91□□□□□ -2.1
NKX6-2Q9C056 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC1.91□□□□□ -2.1
NKX6-2Q9C056 AC243972.3-201ENST00000539655 198 ntBASIC1.91□□□□□ -2.1
NKX6-2Q9C056 HMGB1P14-201ENST00000557424 591 ntBASIC1.91□□□□□ -2.1
NKX6-2Q9C056 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC1.91□□□□□ -2.1
NKX6-2Q9C056 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC1.91□□□□□ -2.1
NKX6-2Q9C056 AC025281.1-201ENST00000567026 265 ntBASIC1.91□□□□□ -2.1
NKX6-2Q9C056 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC1.91□□□□□ -2.1
NKX6-2Q9C056 AC013553.2-201ENST00000604244 589 ntBASIC1.91□□□□□ -2.1
NKX6-2Q9C056 AC026741.1-201ENST00000605892 482 ntBASIC1.91□□□□□ -2.1
NKX6-2Q9C056 AC091946.2-201ENST00000606105 291 ntBASIC1.91□□□□□ -2.1
NKX6-2Q9C056 AP000238.1-201ENST00000608759 426 ntBASIC1.91□□□□□ -2.1
NKX6-2Q9C056 AP005137.2-201ENST00000609238 400 ntBASIC1.91□□□□□ -2.1
NKX6-2Q9C056 TUG1_1.1-201ENST00000610654 145 ntBASIC1.91□□□□□ -2.1
NKX6-2Q9C056 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
NKX6-2Q9C056 AC090132.2-201ENST00000615881 347 ntBASIC1.91□□□□□ -2.1
NKX6-2Q9C056 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC1.91□□□□□ -2.1
NKX6-2Q9C056 AL031601.2-202ENST00000622650 282 ntBASIC1.91□□□□□ -2.1
NKX6-2Q9C056 AL118508.4-201ENST00000624142 1176 ntBASIC1.91□□□□□ -2.1
NKX6-2Q9C056 AC010872.1-201ENST00000624225 675 ntBASIC1.91□□□□□ -2.1
NKX6-2Q9C056 ANKRD26P2-201ENST00000445530 1710 ntBASIC1.91□□□□□ -2.1
NKX6-2Q9C056 CENPCP1-201ENST00000533085 2578 ntBASIC1.91□□□□□ -2.1
NKX6-2Q9C056 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
NKX6-2Q9C056 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
NKX6-2Q9C056 AL359851.1-201ENST00000569460 4997 ntBASIC1.9□□□□□ -2.11
NKX6-2Q9C056 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.9□□□□□ -2.11
NKX6-2Q9C056 RNU5A-1-201ENST00000362698 116 ntBASIC1.9□□□□□ -2.11
NKX6-2Q9C056 RNU1-105P-201ENST00000363470 161 ntBASIC1.9□□□□□ -2.11
NKX6-2Q9C056 RNU6-461P-201ENST00000364195 107 ntBASIC1.9□□□□□ -2.11
NKX6-2Q9C056 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC1.9□□□□□ -2.11
NKX6-2Q9C056 U6.112-201ENST00000384129 70 ntBASIC1.9□□□□□ -2.11
NKX6-2Q9C056 RNU6-1072P-201ENST00000384703 107 ntBASIC1.9□□□□□ -2.11
NKX6-2Q9C056 RNU6-443P-201ENST00000384780 107 ntBASIC1.9□□□□□ -2.11
NKX6-2Q9C056 MIR217-201ENST00000384817 110 ntBASIC1.9□□□□□ -2.11
NKX6-2Q9C056 AL355497.1-201ENST00000406262 551 ntBASIC1.9□□□□□ -2.11
NKX6-2Q9C056 MIR1290-201ENST00000408735 78 ntBASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms