Protein–RNA interactions for Protein: Q9BY43

CHMP4A, Charged multivesicular body protein 4a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4AQ9BY43 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CHMP4AQ9BY43 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
CHMP4AQ9BY43 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
CHMP4AQ9BY43 MTND5P7-201ENST00000413558 1798 ntBASIC4.37□□□□□ -1.71
CHMP4AQ9BY43 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CHMP4AQ9BY43 AC026241.1-201ENST00000517873 2142 ntBASIC4.36□□□□□ -1.71
CHMP4AQ9BY43 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC4.36□□□□□ -1.71
CHMP4AQ9BY43 NFIB-202ENST00000380924 840 ntTSL 5 BASIC4.36□□□□□ -1.71
CHMP4AQ9BY43 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CHMP4AQ9BY43 RNU6-906P-201ENST00000384700 70 ntBASIC4.36□□□□□ -1.71
CHMP4AQ9BY43 MIR325-201ENST00000385260 98 ntBASIC4.36□□□□□ -1.71
CHMP4AQ9BY43 MIR1305-201ENST00000408300 86 ntBASIC4.36□□□□□ -1.71
CHMP4AQ9BY43 RPL30P2-201ENST00000414021 291 ntBASIC4.36□□□□□ -1.71
CHMP4AQ9BY43 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC4.36□□□□□ -1.71
CHMP4AQ9BY43 AC099548.1-201ENST00000421443 426 ntBASIC4.36□□□□□ -1.71
CHMP4AQ9BY43 AC006946.1-201ENST00000429106 328 ntBASIC4.36□□□□□ -1.71
CHMP4AQ9BY43 MTCO1P27-201ENST00000448269 226 ntBASIC4.36□□□□□ -1.71
CHMP4AQ9BY43 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC4.36□□□□□ -1.71
CHMP4AQ9BY43 DUXAP8-207ENST00000456786 622 ntBASIC4.36□□□□□ -1.71
CHMP4AQ9BY43 RPS27P29-201ENST00000463110 252 ntBASIC4.36□□□□□ -1.71
CHMP4AQ9BY43 RPL21P13-201ENST00000488305 481 ntBASIC4.36□□□□□ -1.71
CHMP4AQ9BY43 AC138853.1-201ENST00000503549 823 ntBASIC4.36□□□□□ -1.71
CHMP4AQ9BY43 AC022447.3-201ENST00000506865 495 ntBASIC4.36□□□□□ -1.71
CHMP4AQ9BY43 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC4.36□□□□□ -1.71
CHMP4AQ9BY43 ARL4AP2-201ENST00000507378 601 ntBASIC4.36□□□□□ -1.71
CHMP4AQ9BY43 AC093281.2-201ENST00000510153 597 ntBASIC4.36□□□□□ -1.71
CHMP4AQ9BY43 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC4.36□□□□□ -1.71
CHMP4AQ9BY43 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC4.36□□□□□ -1.71
CHMP4AQ9BY43 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CHMP4AQ9BY43 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC4.36□□□□□ -1.71
CHMP4AQ9BY43 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.36□□□□□ -1.71
CHMP4AQ9BY43 AC008739.2-201ENST00000597006 317 ntBASIC4.36□□□□□ -1.71
CHMP4AQ9BY43 AC073657.2-201ENST00000605661 303 ntBASIC4.36□□□□□ -1.71
CHMP4AQ9BY43 AC018816.2-201ENST00000621460 353 ntBASIC4.36□□□□□ -1.71
CHMP4AQ9BY43 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
CHMP4AQ9BY43 CR383658.2-201ENST00000547576 1525 ntBASIC4.36□□□□□ -1.71
CHMP4AQ9BY43 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
CHMP4AQ9BY43 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC4.35□□□□□ -1.71
CHMP4AQ9BY43 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
CHMP4AQ9BY43 RNU6-270P-201ENST00000364131 105 ntBASIC4.35□□□□□ -1.71
CHMP4AQ9BY43 SNORD21-201ENST00000383953 95 ntBASIC4.35□□□□□ -1.71
CHMP4AQ9BY43 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC4.35□□□□□ -1.71
CHMP4AQ9BY43 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC4.35□□□□□ -1.71
CHMP4AQ9BY43 ELOCP9-201ENST00000418624 239 ntBASIC4.35□□□□□ -1.71
CHMP4AQ9BY43 RPS15AP6-201ENST00000420703 385 ntBASIC4.35□□□□□ -1.71
CHMP4AQ9BY43 AL158071.1-201ENST00000430315 461 ntBASIC4.35□□□□□ -1.71
CHMP4AQ9BY43 USP12PX-201ENST00000432383 1057 ntBASIC4.35□□□□□ -1.71
CHMP4AQ9BY43 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
CHMP4AQ9BY43 MTND3P1-201ENST00000441336 220 ntBASIC4.35□□□□□ -1.71
CHMP4AQ9BY43 MTCO3P45-201ENST00000443036 613 ntBASIC4.35□□□□□ -1.71
CHMP4AQ9BY43 PTENP1-201ENST00000447117 1215 ntBASIC4.35□□□□□ -1.71
CHMP4AQ9BY43 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC4.35□□□□□ -1.71
CHMP4AQ9BY43 AC107934.2-201ENST00000518653 310 ntBASIC4.35□□□□□ -1.71
CHMP4AQ9BY43 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC4.35□□□□□ -1.71
CHMP4AQ9BY43 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC4.35□□□□□ -1.71
CHMP4AQ9BY43 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.35□□□□□ -1.71
CHMP4AQ9BY43 AC087465.1-201ENST00000560574 245 ntBASIC4.35□□□□□ -1.71
CHMP4AQ9BY43 VN1R92P-201ENST00000598511 928 ntBASIC4.35□□□□□ -1.71
CHMP4AQ9BY43 AP000676.3-201ENST00000623299 569 ntBASIC4.35□□□□□ -1.71
CHMP4AQ9BY43 AC006927.4-201ENST00000639187 543 ntBASIC4.35□□□□□ -1.71
CHMP4AQ9BY43 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
CHMP4AQ9BY43 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
CHMP4AQ9BY43 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CHMP4AQ9BY43 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CHMP4AQ9BY43 RNU6-289P-201ENST00000364093 107 ntBASIC4.34□□□□□ -1.71
CHMP4AQ9BY43 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.71
CHMP4AQ9BY43 MIR490-201ENST00000384865 128 ntBASIC4.34□□□□□ -1.71
CHMP4AQ9BY43 MIR888-201ENST00000401186 77 ntBASIC4.34□□□□□ -1.71
CHMP4AQ9BY43 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC4.34□□□□□ -1.71
CHMP4AQ9BY43 AL451054.2-201ENST00000420896 202 ntBASIC4.34□□□□□ -1.71
CHMP4AQ9BY43 AL353678.1-201ENST00000422735 741 ntBASIC4.34□□□□□ -1.71
CHMP4AQ9BY43 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC4.34□□□□□ -1.71
CHMP4AQ9BY43 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC4.34□□□□□ -1.71
CHMP4AQ9BY43 TXNL1P1-201ENST00000429528 554 ntBASIC4.34□□□□□ -1.71
CHMP4AQ9BY43 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC4.34□□□□□ -1.71
CHMP4AQ9BY43 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC4.34□□□□□ -1.71
CHMP4AQ9BY43 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC4.34□□□□□ -1.71
CHMP4AQ9BY43 AC004801.2-202ENST00000463559 283 ntBASIC4.34□□□□□ -1.71
CHMP4AQ9BY43 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CHMP4AQ9BY43 RPS27P26-201ENST00000494583 239 ntBASIC4.34□□□□□ -1.71
CHMP4AQ9BY43 AC020893.1-201ENST00000502452 580 ntBASIC4.34□□□□□ -1.71
CHMP4AQ9BY43 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC4.34□□□□□ -1.71
CHMP4AQ9BY43 DSTNP2-201ENST00000504533 515 ntBASIC4.34□□□□□ -1.71
CHMP4AQ9BY43 AC021146.8-201ENST00000507455 733 ntBASIC4.34□□□□□ -1.71
CHMP4AQ9BY43 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC4.34□□□□□ -1.71
CHMP4AQ9BY43 AC113155.1-201ENST00000511141 769 ntBASIC4.34□□□□□ -1.71
CHMP4AQ9BY43 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC4.34□□□□□ -1.71
CHMP4AQ9BY43 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC4.34□□□□□ -1.71
CHMP4AQ9BY43 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC4.34□□□□□ -1.71
CHMP4AQ9BY43 AC105185.1-201ENST00000518705 535 ntBASIC4.34□□□□□ -1.71
CHMP4AQ9BY43 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC4.34□□□□□ -1.71
CHMP4AQ9BY43 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.34□□□□□ -1.71
CHMP4AQ9BY43 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC4.34□□□□□ -1.71
CHMP4AQ9BY43 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.34□□□□□ -1.71
CHMP4AQ9BY43 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC4.34□□□□□ -1.71
CHMP4AQ9BY43 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC4.34□□□□□ -1.71
CHMP4AQ9BY43 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC4.34□□□□□ -1.71
CHMP4AQ9BY43 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.34□□□□□ -1.71
CHMP4AQ9BY43 AL139344.1-201ENST00000605228 195 ntBASIC4.34□□□□□ -1.71
CHMP4AQ9BY43 SNORD39.4-201ENST00000620099 78 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms