Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
COL25A1Q9BXS0 RNU6-700P-201ENST00000391043 107 ntBASIC5.42□□□□□ -1.54
COL25A1Q9BXS0 AL009179.1-201ENST00000406085 265 ntBASIC5.42□□□□□ -1.54
COL25A1Q9BXS0 AC096921.1-201ENST00000411661 375 ntBASIC5.42□□□□□ -1.54
COL25A1Q9BXS0 EI24P1-201ENST00000416584 867 ntBASIC5.42□□□□□ -1.54
COL25A1Q9BXS0 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC5.42□□□□□ -1.54
COL25A1Q9BXS0 AL159987.2-201ENST00000432754 307 ntBASIC5.42□□□□□ -1.54
COL25A1Q9BXS0 BX679664.1-201ENST00000434429 253 ntBASIC5.42□□□□□ -1.54
COL25A1Q9BXS0 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC5.42□□□□□ -1.54
COL25A1Q9BXS0 AC011276.1-201ENST00000469688 323 ntBASIC5.42□□□□□ -1.54
COL25A1Q9BXS0 AL136126.1-201ENST00000473603 402 ntBASIC5.42□□□□□ -1.54
COL25A1Q9BXS0 RNU1-45P-201ENST00000517191 141 ntBASIC5.42□□□□□ -1.54
COL25A1Q9BXS0 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.42□□□□□ -1.54
COL25A1Q9BXS0 AC107016.1-201ENST00000550463 337 ntBASIC5.42□□□□□ -1.54
COL25A1Q9BXS0 AC233702.2-202ENST00000562547 291 ntBASIC5.42□□□□□ -1.54
COL25A1Q9BXS0 AC005951.2-201ENST00000576282 495 ntBASIC5.42□□□□□ -1.54
COL25A1Q9BXS0 MIR4420-201ENST00000583944 77 ntBASIC5.42□□□□□ -1.54
COL25A1Q9BXS0 AC012119.1-201ENST00000603184 222 ntBASIC5.42□□□□□ -1.54
COL25A1Q9BXS0 AC005191.1-201ENST00000603950 358 ntBASIC5.42□□□□□ -1.54
COL25A1Q9BXS0 AL158032.1-201ENST00000605401 106 ntBASIC5.42□□□□□ -1.54
COL25A1Q9BXS0 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC5.42□□□□□ -1.54
COL25A1Q9BXS0 FP236240.3-201ENST00000623061 327 ntBASIC5.42□□□□□ -1.54
COL25A1Q9BXS0 AC243829.7-201ENST00000633081 225 ntBASIC5.42□□□□□ -1.54
COL25A1Q9BXS0 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.42□□□□□ -1.54
COL25A1Q9BXS0 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
COL25A1Q9BXS0 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
COL25A1Q9BXS0 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
COL25A1Q9BXS0 AL591848.4-201ENST00000567832 3472 ntBASIC5.42□□□□□ -1.54
COL25A1Q9BXS0 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
COL25A1Q9BXS0 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.42□□□□□ -1.54
COL25A1Q9BXS0 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.42□□□□□ -1.54
COL25A1Q9BXS0 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.42□□□□□ -1.54
COL25A1Q9BXS0 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC5.42□□□□□ -1.54
COL25A1Q9BXS0 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
COL25A1Q9BXS0 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
COL25A1Q9BXS0 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
COL25A1Q9BXS0 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC5.42□□□□□ -1.54
COL25A1Q9BXS0 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
COL25A1Q9BXS0 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC5.41□□□□□ -1.54
COL25A1Q9BXS0 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC5.41□□□□□ -1.54
COL25A1Q9BXS0 PRO1804-201ENST00000623780 2050 ntBASIC5.41□□□□□ -1.54
COL25A1Q9BXS0 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC5.41□□□□□ -1.54
COL25A1Q9BXS0 AC018628.1-201ENST00000624147 3819 ntBASIC5.41□□□□□ -1.54
COL25A1Q9BXS0 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC5.41□□□□□ -1.54
COL25A1Q9BXS0 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
COL25A1Q9BXS0 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
COL25A1Q9BXS0 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
COL25A1Q9BXS0 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
COL25A1Q9BXS0 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.41□□□□□ -1.54
COL25A1Q9BXS0 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
COL25A1Q9BXS0 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.41□□□□□ -1.54
COL25A1Q9BXS0 AC005261.2-201ENST00000593427 4258 ntBASIC5.41□□□□□ -1.54
COL25A1Q9BXS0 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
COL25A1Q9BXS0 RNU6-1284P-201ENST00000363701 100 ntBASIC5.41□□□□□ -1.54
COL25A1Q9BXS0 Y_RNA.272-201ENST00000364696 102 ntBASIC5.41□□□□□ -1.54
COL25A1Q9BXS0 SNORD73A-201ENST00000386062 65 ntBASIC5.41□□□□□ -1.54
COL25A1Q9BXS0 AL591034.2-201ENST00000402839 359 ntBASIC5.41□□□□□ -1.54
COL25A1Q9BXS0 AL033519.2-201ENST00000403958 392 ntBASIC5.41□□□□□ -1.54
COL25A1Q9BXS0 RNU5E-9P-201ENST00000411164 104 ntBASIC5.41□□□□□ -1.54
COL25A1Q9BXS0 TRAPPC2P4-201ENST00000421750 331 ntBASIC5.41□□□□□ -1.54
COL25A1Q9BXS0 TMEM167AP1-201ENST00000423409 219 ntBASIC5.41□□□□□ -1.54
COL25A1Q9BXS0 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.41□□□□□ -1.54
COL25A1Q9BXS0 PHBP16-201ENST00000446318 950 ntBASIC5.41□□□□□ -1.54
COL25A1Q9BXS0 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC5.41□□□□□ -1.54
COL25A1Q9BXS0 AL445433.1-201ENST00000457507 257 ntBASIC5.41□□□□□ -1.54
COL25A1Q9BXS0 HMGB1P25-201ENST00000468402 607 ntBASIC5.41□□□□□ -1.54
COL25A1Q9BXS0 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC5.41□□□□□ -1.54
COL25A1Q9BXS0 RN7SL132P-201ENST00000478131 296 ntBASIC5.41□□□□□ -1.54
COL25A1Q9BXS0 AC108471.1-201ENST00000513977 287 ntBASIC5.41□□□□□ -1.54
COL25A1Q9BXS0 RNU5F-8P-201ENST00000515941 111 ntBASIC5.41□□□□□ -1.54
COL25A1Q9BXS0 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.41□□□□□ -1.54
COL25A1Q9BXS0 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC5.41□□□□□ -1.54
COL25A1Q9BXS0 AL442163.3-201ENST00000554110 156 ntBASIC5.41□□□□□ -1.54
COL25A1Q9BXS0 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC5.41□□□□□ -1.54
COL25A1Q9BXS0 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
COL25A1Q9BXS0 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC5.41□□□□□ -1.54
COL25A1Q9BXS0 FAM60BP-201ENST00000578364 658 ntBASIC5.41□□□□□ -1.54
COL25A1Q9BXS0 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC5.41□□□□□ -1.54
COL25A1Q9BXS0 MIR4282-201ENST00000583613 67 ntBASIC5.41□□□□□ -1.54
COL25A1Q9BXS0 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.41□□□□□ -1.54
COL25A1Q9BXS0 AP000769.2-201ENST00000602344 396 ntBASIC5.41□□□□□ -1.54
COL25A1Q9BXS0 AL670379.6-201ENST00000603753 252 ntBASIC5.41□□□□□ -1.54
COL25A1Q9BXS0 AL670379.1-201ENST00000604752 252 ntBASIC5.41□□□□□ -1.54
COL25A1Q9BXS0 AL670379.5-201ENST00000605253 252 ntBASIC5.41□□□□□ -1.54
COL25A1Q9BXS0 AL670379.8-201ENST00000605353 252 ntBASIC5.41□□□□□ -1.54
COL25A1Q9BXS0 AL670379.7-201ENST00000605823 252 ntBASIC5.41□□□□□ -1.54
COL25A1Q9BXS0 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.41□□□□□ -1.54
COL25A1Q9BXS0 AL589994.2-201ENST00000621124 579 ntBASIC5.41□□□□□ -1.54
COL25A1Q9BXS0 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC5.41□□□□□ -1.54
COL25A1Q9BXS0 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
COL25A1Q9BXS0 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
COL25A1Q9BXS0 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
COL25A1Q9BXS0 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
COL25A1Q9BXS0 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
COL25A1Q9BXS0 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
COL25A1Q9BXS0 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
COL25A1Q9BXS0 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
COL25A1Q9BXS0 ZNF299P-201ENST00000406845 1804 ntBASIC5.41□□□□□ -1.54
COL25A1Q9BXS0 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.41□□□□□ -1.54
COL25A1Q9BXS0 DNM1P47-203ENST00000571780 12667 ntBASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms