Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
SALL3Q9BXA9 RNY4P34-201ENST00000364779 95 ntBASIC4.4□□□□□ -1.71
SALL3Q9BXA9 RNU6-1279P-201ENST00000383917 103 ntBASIC4.4□□□□□ -1.71
SALL3Q9BXA9 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SALL3Q9BXA9 RPS3AP36-201ENST00000398190 775 ntBASIC4.4□□□□□ -1.71
SALL3Q9BXA9 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.4□□□□□ -1.71
SALL3Q9BXA9 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.4□□□□□ -1.71
SALL3Q9BXA9 SNRPEP10-201ENST00000420249 274 ntBASIC4.4□□□□□ -1.71
SALL3Q9BXA9 USP9YP36-201ENST00000424581 829 ntBASIC4.4□□□□□ -1.71
SALL3Q9BXA9 AC023347.2-201ENST00000433994 462 ntBASIC4.4□□□□□ -1.71
SALL3Q9BXA9 RPS26P40-201ENST00000435209 294 ntBASIC4.4□□□□□ -1.71
SALL3Q9BXA9 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC4.4□□□□□ -1.71
SALL3Q9BXA9 ARPC3P1-201ENST00000437218 533 ntBASIC4.4□□□□□ -1.71
SALL3Q9BXA9 AC093019.1-201ENST00000443135 252 ntBASIC4.4□□□□□ -1.71
SALL3Q9BXA9 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC4.4□□□□□ -1.71
SALL3Q9BXA9 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC4.4□□□□□ -1.71
SALL3Q9BXA9 C1DP4-201ENST00000455429 424 ntBASIC4.4□□□□□ -1.71
SALL3Q9BXA9 BX322784.1-201ENST00000455793 1077 ntBASIC4.4□□□□□ -1.71
SALL3Q9BXA9 MTCO1P42-201ENST00000457379 726 ntBASIC4.4□□□□□ -1.71
SALL3Q9BXA9 PMCHL2-203ENST00000457791 237 ntBASIC4.4□□□□□ -1.71
SALL3Q9BXA9 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC4.4□□□□□ -1.71
SALL3Q9BXA9 AC114967.1-201ENST00000504890 259 ntBASIC4.4□□□□□ -1.71
SALL3Q9BXA9 PCBP2P3-201ENST00000509726 843 ntBASIC4.4□□□□□ -1.71
SALL3Q9BXA9 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC4.4□□□□□ -1.71
SALL3Q9BXA9 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC4.4□□□□□ -1.71
SALL3Q9BXA9 AP003122.4-201ENST00000530980 758 ntBASIC4.4□□□□□ -1.71
SALL3Q9BXA9 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.4□□□□□ -1.71
SALL3Q9BXA9 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC4.4□□□□□ -1.71
SALL3Q9BXA9 AL845331.3-202ENST00000562856 261 ntBASIC4.4□□□□□ -1.71
SALL3Q9BXA9 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.4□□□□□ -1.71
SALL3Q9BXA9 AC012507.3-201ENST00000603556 477 ntBASIC4.4□□□□□ -1.71
SALL3Q9BXA9 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC4.4□□□□□ -1.71
SALL3Q9BXA9 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC4.4□□□□□ -1.71
SALL3Q9BXA9 MIR6715B-201ENST00000637172 77 ntBASIC4.4□□□□□ -1.71
SALL3Q9BXA9 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SALL3Q9BXA9 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.4□□□□□ -1.71
SALL3Q9BXA9 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.4□□□□□ -1.71
SALL3Q9BXA9 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
SALL3Q9BXA9 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
SALL3Q9BXA9 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.39□□□□□ -1.71
SALL3Q9BXA9 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC4.39□□□□□ -1.71
SALL3Q9BXA9 AC093908.1-201ENST00000623125 8092 ntBASIC4.39□□□□□ -1.71
SALL3Q9BXA9 AL161912.2-201ENST00000565707 3007 ntBASIC4.39□□□□□ -1.71
SALL3Q9BXA9 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
SALL3Q9BXA9 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.39□□□□□ -1.71
SALL3Q9BXA9 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SALL3Q9BXA9 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
SALL3Q9BXA9 AL356489.2-201ENST00000566968 3528 ntBASIC4.39□□□□□ -1.71
SALL3Q9BXA9 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.39□□□□□ -1.71
SALL3Q9BXA9 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SALL3Q9BXA9 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
SALL3Q9BXA9 SNORD46.1-201ENST00000364139 104 ntBASIC4.39□□□□□ -1.71
SALL3Q9BXA9 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
SALL3Q9BXA9 RNU6-878P-201ENST00000384578 110 ntBASIC4.39□□□□□ -1.71
SALL3Q9BXA9 RPL21P17-201ENST00000397467 475 ntBASIC4.39□□□□□ -1.71
SALL3Q9BXA9 PTMAP2-201ENST00000397627 327 ntBASIC4.39□□□□□ -1.71
SALL3Q9BXA9 AL121972.1-201ENST00000402023 252 ntBASIC4.39□□□□□ -1.71
SALL3Q9BXA9 AL356776.1-201ENST00000406574 447 ntBASIC4.39□□□□□ -1.71
SALL3Q9BXA9 AL603766.1-201ENST00000407763 664 ntBASIC4.39□□□□□ -1.71
SALL3Q9BXA9 RAB9AP3-201ENST00000412737 573 ntBASIC4.39□□□□□ -1.71
SALL3Q9BXA9 SPA17P1-201ENST00000416656 452 ntBASIC4.39□□□□□ -1.71
SALL3Q9BXA9 AL513185.2-201ENST00000425543 193 ntBASIC4.39□□□□□ -1.71
SALL3Q9BXA9 RPL7P2-201ENST00000427639 268 ntBASIC4.39□□□□□ -1.71
SALL3Q9BXA9 CYCSP4-201ENST00000429682 331 ntBASIC4.39□□□□□ -1.71
SALL3Q9BXA9 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC4.39□□□□□ -1.71
SALL3Q9BXA9 RPL23AP16-201ENST00000441715 421 ntBASIC4.39□□□□□ -1.71
SALL3Q9BXA9 RPL17P49-201ENST00000443728 411 ntBASIC4.39□□□□□ -1.71
SALL3Q9BXA9 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC4.39□□□□□ -1.71
SALL3Q9BXA9 RAB9AP1-201ENST00000449393 573 ntBASIC4.39□□□□□ -1.71
SALL3Q9BXA9 AL121877.1-201ENST00000453704 622 ntBASIC4.39□□□□□ -1.71
SALL3Q9BXA9 RPS20P24-201ENST00000457473 361 ntBASIC4.39□□□□□ -1.71
SALL3Q9BXA9 RN7SL132P-201ENST00000478131 296 ntBASIC4.39□□□□□ -1.71
SALL3Q9BXA9 FTH1P24-201ENST00000503502 462 ntBASIC4.39□□□□□ -1.71
SALL3Q9BXA9 AC006390.1-201ENST00000508068 283 ntBASIC4.39□□□□□ -1.71
SALL3Q9BXA9 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC4.39□□□□□ -1.71
SALL3Q9BXA9 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC4.39□□□□□ -1.71
SALL3Q9BXA9 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC4.39□□□□□ -1.71
SALL3Q9BXA9 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.39□□□□□ -1.71
SALL3Q9BXA9 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.39□□□□□ -1.71
SALL3Q9BXA9 CENPUP1-201ENST00000526649 1202 ntBASIC4.39□□□□□ -1.71
SALL3Q9BXA9 AP000790.1-201ENST00000528891 737 ntBASIC4.39□□□□□ -1.71
SALL3Q9BXA9 AL442663.2-201ENST00000554385 511 ntBASIC4.39□□□□□ -1.71
SALL3Q9BXA9 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC4.39□□□□□ -1.71
SALL3Q9BXA9 MIR4444-1-201ENST00000581696 74 ntBASIC4.39□□□□□ -1.71
SALL3Q9BXA9 MIR4444-2-201ENST00000584390 74 ntBASIC4.39□□□□□ -1.71
SALL3Q9BXA9 AC006077.1-201ENST00000604746 343 ntBASIC4.39□□□□□ -1.71
SALL3Q9BXA9 RNU6-87P-201ENST00000607561 108 ntBASIC4.39□□□□□ -1.71
SALL3Q9BXA9 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
SALL3Q9BXA9 AC022149.2-201ENST00000621061 203 ntBASIC4.39□□□□□ -1.71
SALL3Q9BXA9 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.39□□□□□ -1.71
SALL3Q9BXA9 AC012442.3-202ENST00000636742 206 ntBASIC4.39□□□□□ -1.71
SALL3Q9BXA9 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SALL3Q9BXA9 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SALL3Q9BXA9 AC058791.1-201ENST00000608412 3198 ntBASIC4.39□□□□□ -1.71
SALL3Q9BXA9 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
SALL3Q9BXA9 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
SALL3Q9BXA9 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.38□□□□□ -1.71
SALL3Q9BXA9 AC006504.1-201ENST00000562493 3666 ntBASIC4.38□□□□□ -1.71
SALL3Q9BXA9 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
SALL3Q9BXA9 SNORD56.2-201ENST00000363242 71 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms