Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 LINC00888-204ENST00000487386 421 ntBASIC1.48□□□□□ -2.17
VPS25Q9BRG1 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC1.48□□□□□ -2.17
VPS25Q9BRG1 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
VPS25Q9BRG1 RNA5SP282-201ENST00000516355 108 ntBASIC1.48□□□□□ -2.17
VPS25Q9BRG1 RNU6-1282P-201ENST00000516735 96 ntBASIC1.48□□□□□ -2.17
VPS25Q9BRG1 AC023632.4-201ENST00000517783 191 ntBASIC1.48□□□□□ -2.17
VPS25Q9BRG1 CDH12P4-201ENST00000517835 295 ntBASIC1.48□□□□□ -2.17
VPS25Q9BRG1 CDH12P3-201ENST00000517935 295 ntBASIC1.48□□□□□ -2.17
VPS25Q9BRG1 CDH12P1-201ENST00000518435 295 ntBASIC1.48□□□□□ -2.17
VPS25Q9BRG1 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC1.48□□□□□ -2.17
VPS25Q9BRG1 HMGB1P1-201ENST00000522557 636 ntBASIC1.48□□□□□ -2.17
VPS25Q9BRG1 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC1.48□□□□□ -2.17
VPS25Q9BRG1 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC1.48□□□□□ -2.17
VPS25Q9BRG1 AL133241.1-201ENST00000556832 487 ntBASIC1.48□□□□□ -2.17
VPS25Q9BRG1 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC1.48□□□□□ -2.17
VPS25Q9BRG1 AF230666.2-201ENST00000602328 725 ntBASIC1.48□□□□□ -2.17
VPS25Q9BRG1 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC1.48□□□□□ -2.17
VPS25Q9BRG1 AC004775.1-201ENST00000607389 753 ntBASIC1.48□□□□□ -2.17
VPS25Q9BRG1 AC097504.2-201ENST00000608088 454 ntBASIC1.48□□□□□ -2.17
VPS25Q9BRG1 AC007038.2-201ENST00000608095 740 ntBASIC1.48□□□□□ -2.17
VPS25Q9BRG1 AC109454.4-201ENST00000623411 649 ntBASIC1.48□□□□□ -2.17
VPS25Q9BRG1 AC025048.6-202ENST00000627667 438 ntBASIC1.48□□□□□ -2.17
VPS25Q9BRG1 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC1.48□□□□□ -2.17
VPS25Q9BRG1 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC1.48□□□□□ -2.17
VPS25Q9BRG1 U6.107-201ENST00000637108 79 ntBASIC1.48□□□□□ -2.17
VPS25Q9BRG1 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
VPS25Q9BRG1 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
VPS25Q9BRG1 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC1.48□□□□□ -2.17
VPS25Q9BRG1 AK9-203ENST00000368948 2478 ntTSL 5 BASIC1.47□□□□□ -2.17
VPS25Q9BRG1 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.47□□□□□ -2.17
VPS25Q9BRG1 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.47□□□□□ -2.17
VPS25Q9BRG1 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC1.47□□□□□ -2.17
VPS25Q9BRG1 U8.3-201ENST00000363321 132 ntBASIC1.47□□□□□ -2.17
VPS25Q9BRG1 U3.26-201ENST00000391236 204 ntBASIC1.47□□□□□ -2.17
VPS25Q9BRG1 AL035405.1-201ENST00000400795 710 ntBASIC1.47□□□□□ -2.17
VPS25Q9BRG1 PTGES3P2-201ENST00000407942 482 ntBASIC1.47□□□□□ -2.17
VPS25Q9BRG1 EEF1A1P41-201ENST00000414667 207 ntBASIC1.47□□□□□ -2.17
VPS25Q9BRG1 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC1.47□□□□□ -2.17
VPS25Q9BRG1 AC087499.2-201ENST00000432861 149 ntBASIC1.47□□□□□ -2.17
VPS25Q9BRG1 AC010881.1-201ENST00000433830 235 ntBASIC1.47□□□□□ -2.17
VPS25Q9BRG1 CYCSP32-201ENST00000440548 321 ntBASIC1.47□□□□□ -2.17
VPS25Q9BRG1 RAB11AP1-201ENST00000442978 646 ntBASIC1.47□□□□□ -2.17
VPS25Q9BRG1 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC1.47□□□□□ -2.17
VPS25Q9BRG1 AC093770.1-201ENST00000511559 571 ntBASIC1.47□□□□□ -2.17
VPS25Q9BRG1 MIR892C-201ENST00000516410 77 ntBASIC1.47□□□□□ -2.17
VPS25Q9BRG1 AC103783.1-201ENST00000520506 373 ntBASIC1.47□□□□□ -2.17
VPS25Q9BRG1 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC1.47□□□□□ -2.17
VPS25Q9BRG1 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC1.47□□□□□ -2.17
VPS25Q9BRG1 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC1.47□□□□□ -2.17
VPS25Q9BRG1 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC1.47□□□□□ -2.17
VPS25Q9BRG1 AC024614.2-201ENST00000577584 372 ntBASIC1.47□□□□□ -2.17
VPS25Q9BRG1 MIR4285-201ENST00000581001 85 ntBASIC1.47□□□□□ -2.17
VPS25Q9BRG1 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC1.47□□□□□ -2.17
VPS25Q9BRG1 AC010738.1-201ENST00000604970 987 ntBASIC1.47□□□□□ -2.17
VPS25Q9BRG1 AC068722.2-201ENST00000618734 544 ntBASIC1.47□□□□□ -2.17
VPS25Q9BRG1 AL158801.5-201ENST00000623123 465 ntBASIC1.47□□□□□ -2.17
VPS25Q9BRG1 AC073592.7-201ENST00000623659 507 ntBASIC1.47□□□□□ -2.17
VPS25Q9BRG1 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.47□□□□□ -2.17
VPS25Q9BRG1 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
VPS25Q9BRG1 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
VPS25Q9BRG1 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
VPS25Q9BRG1 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
VPS25Q9BRG1 RNA5SP276-201ENST00000362580 94 ntBASIC1.46□□□□□ -2.18
VPS25Q9BRG1 RNU6-444P-201ENST00000383988 108 ntBASIC1.46□□□□□ -2.18
VPS25Q9BRG1 RNA5SP21-201ENST00000410917 96 ntBASIC1.46□□□□□ -2.18
VPS25Q9BRG1 Z85995.1-201ENST00000415547 335 ntBASIC1.46□□□□□ -2.18
VPS25Q9BRG1 AL158823.1-201ENST00000418441 478 ntBASIC1.46□□□□□ -2.18
VPS25Q9BRG1 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.46□□□□□ -2.18
VPS25Q9BRG1 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.46□□□□□ -2.18
VPS25Q9BRG1 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.46□□□□□ -2.18
VPS25Q9BRG1 AL035410.1-201ENST00000427409 427 ntBASIC1.46□□□□□ -2.18
VPS25Q9BRG1 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.46□□□□□ -2.18
VPS25Q9BRG1 MTATP6P11-201ENST00000428071 670 ntBASIC1.46□□□□□ -2.18
VPS25Q9BRG1 AC005300.1-201ENST00000428401 373 ntBASIC1.46□□□□□ -2.18
VPS25Q9BRG1 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.46□□□□□ -2.18
VPS25Q9BRG1 TAAR7P-201ENST00000436141 242 ntBASIC1.46□□□□□ -2.18
VPS25Q9BRG1 AL591503.2-201ENST00000442314 1005 ntBASIC1.46□□□□□ -2.18
VPS25Q9BRG1 RPL23AP6-201ENST00000446637 472 ntBASIC1.46□□□□□ -2.18
VPS25Q9BRG1 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC1.46□□□□□ -2.18
VPS25Q9BRG1 DCLRE1CP1-201ENST00000454630 470 ntBASIC1.46□□□□□ -2.18
VPS25Q9BRG1 AC104685.1-201ENST00000502445 371 ntBASIC1.46□□□□□ -2.18
VPS25Q9BRG1 AC096745.1-201ENST00000509945 370 ntBASIC1.46□□□□□ -2.18
VPS25Q9BRG1 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC1.46□□□□□ -2.18
VPS25Q9BRG1 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC1.46□□□□□ -2.18
VPS25Q9BRG1 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC1.46□□□□□ -2.18
VPS25Q9BRG1 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC1.46□□□□□ -2.18
VPS25Q9BRG1 SETP7-201ENST00000552169 453 ntBASIC1.46□□□□□ -2.18
VPS25Q9BRG1 MTCYBP27-201ENST00000555160 670 ntBASIC1.46□□□□□ -2.18
VPS25Q9BRG1 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC1.46□□□□□ -2.18
VPS25Q9BRG1 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC1.46□□□□□ -2.18
VPS25Q9BRG1 AC243960.4-201ENST00000600532 288 ntBASIC1.46□□□□□ -2.18
VPS25Q9BRG1 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC1.46□□□□□ -2.18
VPS25Q9BRG1 AC024941.1-201ENST00000612250 334 ntBASIC1.46□□□□□ -2.18
VPS25Q9BRG1 AL773524.1-201ENST00000614065 229 ntBASIC1.46□□□□□ -2.18
VPS25Q9BRG1 AL356863.1-201ENST00000623378 1080 ntBASIC1.46□□□□□ -2.18
VPS25Q9BRG1 AC068057.2-201ENST00000624047 895 ntBASIC1.46□□□□□ -2.18
VPS25Q9BRG1 MIR7157-201ENST00000635801 60 ntBASIC1.46□□□□□ -2.18
VPS25Q9BRG1 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
VPS25Q9BRG1 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.46□□□□□ -2.18
VPS25Q9BRG1 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms